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Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:

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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 21-40 of 5433< prev pagenext page >

# Query Length Result vs. Range Score %id Covered by template(s)
21 gi|30260216|ref|NP_842593.1| hypothetical protein (BA_0022) [Bacillus anthracis str. Ames] 73 HGM_OVER 7-69 -3.890 16  PB027778 Q5LHJ0_BACFN/1-110 PB027778; Pfam-B_27778;
22 gi|30260217|ref|NP_842594.1| sigma-k factor processing regulatory protein BofA (BA_0024) [Bacillus anthracis str. Ames] 89 HGM_OVER 1-86 -4.070 13  PB048631 gi|160885545|ref|ZP_02066548.1| hypothetical protein BACOVA_03545 [Bacteroides ovatus ATCC 8483]gi|156109167|gb|EDO10912.1| hypothetical protein BACOVA_03545 [Bacteroides ovatus ATCC 8483]
23 gi|30260218|ref|NP_842595.1| csfB protein, putative (BA_0025) [Bacillus anthracis str. Ames] 59 HGM_OVER 17-54 -3.600 13  PB012386 gi|82541244|ref|XP_724876.1| blood-stage membrane protein Ag-1 [Plasmodium yoelii yoelii str. 17XNL]gi|23479680|gb|EAA16441.1| blood-stage membrane protein Ag-1 [Plasmodium yoelii yoelii]
24 gi|30260219|ref|NP_842596.1| lysine decarboxylase (BA_0026) [Bacillus anthracis str. Ames] 473 HGM_OVER 56-295 -3.150 PB001025 Q1QFV3_NITHX/1-288 PB001025; Pfam-B_1025;
25 gi|30260220|ref|NP_842597.1| thymidylate kinase (BA_0027) [Bacillus anthracis str. Ames] 208 HGM_OVER 44-185 -3.590 11  PB009534 gi|153852721|ref|ZP_01994158.1| hypothetical protein DORLON_00140 [Dorea longicatena DSM 13814]gi|149754363|gb|EDM64294.1| hypothetical protein DORLON_00140 [Dorea longicatena DSM 13814]
26 gi|30260221|ref|NP_842598.1| DNA polymerase III subunit delta' (BA_0028) [Bacillus anthracis str. Ames] 327 HGM_OVER 3-75 -5.410 12  HGC00991 gi|163600283|dbj|BABF01000984.1|3.0 TMP01348;
27 gi|30260222|ref|NP_842599.1| hypothetical protein (BA_0029) [Bacillus anthracis str. Ames] 278 HGM_OVER 140-231 -6.640 20  HGC00991 gi|163600283|dbj|BABF01000984.1|3.0 TMP01348;
28 gi|30260223|ref|NP_842600.1| DNA replication intiation control protein YabA (BA_0030) [Bacillus anthracis str. Ames] 116 HGM_OVER 1-89 -4.280 14  PB202086 Q8G498_BIFLO/2-200 PB202086; Pfam-B_202086;
29 gi|30260224|ref|NP_842601.1| hypothetical protein (BA_0031) [Bacillus anthracis str. Ames] 246 HGM_OVER 1-144 -3.900 PB007011 gi|160888195|ref|ZP_02069198.1| hypothetical protein BACUNI_00603 [Bacteroides uniformis ATCC 8492]gi|156862330|gb|EDO55761.1| hypothetical protein BACUNI_00603 [Bacteroides uniformis ATCC 8492]
30 gi|30260225|ref|NP_842602.1| GIY-YIG nuclease superfamily protein (BA_0032) [Bacillus anthracis str. Ames] 96 HGM_OVER 11-96 -4.800 12  PB015954 Q6WBB3_BIFBR/1-225 PB015954; Pfam-B_15954;
31 gi|30260226|ref|NP_842603.1| hypothetical protein (BA_0033) [Bacillus anthracis str. Ames] 291 HGM_OVER 66-134 -4.430 18  PB031792 gi|154174791|ref|YP_001409041.1| flavodoxin family protein [Campylobacter curvus 525.92]gi|112804021|gb|EAU01365.1| flavodoxin family protein [Campylobacter curvus 525.92]
32 gi|30260227|ref|NP_842604.1| transition state transcriptional regulatory protein AbrB (BA_0034) [Bacillus anthracis str. Ames] 94 HGM_OVER 6-36 -3.640 35  PB001934 Q6PSL5_CHLRE/821-1150 PB001934; Pfam-B_1934;
33 gi|30260228|ref|NP_842605.1| methionyl-tRNA synthetase (BA_0036) [Bacillus anthracis str. Ames] 660 HGM_OVER 565-647 -4.140 10  HGC00518 gi|162728471|dbj|BAAY01000490.1|2.0 TMP00574;
34 gi|30260229|ref|NP_842606.1| TatD family deoxyribonuclease (BA_0037) [Bacillus anthracis str. Ames] 255 HGM_OVER 39-246 -3.900 10  PB013946 A7ABR4_9PORP/121-442 PB013946; Pfam-B_13946;
35 gi|30260230|ref|NP_842607.1| primase-related protein (BA_0038) [Bacillus anthracis str. Ames] 185 HGM_OVER 1-69 -3.590 11  HGC00166 gi|163579340|dbj|BABE01005762.1|1.0 TMP00473;
36 gi|30260231|ref|NP_842608.1| dimethyladenosine transferase (BA_0039) [Bacillus anthracis str. Ames] 292 HGM_OVER 25-233 -3.060 11  PB015954 Q6WBB3_BIFBR/1-225 PB015954; Pfam-B_15954;
37 gi|30260232|ref|NP_842609.1| yabG protein (BA_0040) [Bacillus anthracis str. Ames] 287 HGM_OVER 94-192 -3.560 10  PB031792 gi|154174791|ref|YP_001409041.1| flavodoxin family protein [Campylobacter curvus 525.92]gi|112804021|gb|EAU01365.1| flavodoxin family protein [Campylobacter curvus 525.92]
38 gi|30260233|ref|NP_842610.1| veg protein (BA_0041) [Bacillus anthracis str. Ames] 86 HGM_OVER 3-71 -4.380 PB018258 Q7MT99_PORGI/1-157 PB018258; Pfam-B_18258;
39 gi|30260234|ref|NP_842611.1| small, acid-soluble spore protein (BA_0042) [Bacillus anthracis str. Ames] 59 HGM_OVER 3-46 -1.610 PB060121 Q64SA7_BACFR/1-251 PB060121; Pfam-B_60121;
40 gi|30260235|ref|NP_842612.1| 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (BA_0043) [Bacillus anthracis str. Ames] 289 HGM_OVER 10-207 -2.710 11  PB000119 Q6KIT1_MYCMO/1-381 PB000119; Pfam-B_119;


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Database searching by flexible protein structure alignment. Protein Sci. 2004 Jul;13(7):1841-50.