current user: public

Please be advised that we have recently moved our server to a new location. We tried our best to fully test all functions on the website, but if something does not work for you please let us know.

Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:

Page size:   Sort by score   Show only entries containing string:

Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 21-40 of 1693< prev pagenext page >

# Query Length Result vs. Range Score %id Covered by template(s)
21 gi|11497071|ref|NP_051182.1| hypothetical protein (BB_P21) [Borrelia burgdorferi B31] 201 COG1018 1-185 -5.720 13  [J] COG1890 Ribosomal protein S3AE
22 gi|11497072|ref|NP_051183.1| hypothetical protein (BB_P22) [Borrelia burgdorferi B31] 271 COG1018 6-171 -4.870 10  [C] KOG3458 NADH:ubiquinone oxidoreductase, NDUFA8/PGIV/19 kDa subunit
23 gi|11497073|ref|NP_051184.1| pore-forming hemolysin (BB_P23) [Borrelia burgdorferi B31] 67 COG1018 8-56 -6.190 20  [S] KOG4502 Predicted membrane protein
24 gi|11497074|ref|NP_051185.1| hemolysin accessory protein (BB_P24) [Borrelia burgdorferi B31] 115 COG1018 27-111 -8.330 16  [S] COG5587 Uncharacterized conserved protein
25 gi|11497075|ref|NP_051186.1| hypothetical protein (BB_P25) [Borrelia burgdorferi B31] 111 COG1018 9-111 -5.660 17  [TUZ] KOG2856 Adaptor protein PACSIN
26 gi|11497076|ref|NP_051187.1|(removed signalp:1-22) hypothetical protein (BB_P26) [Borrelia burgdorferi B31] 97 COG1018 19-97 -8.550 17  [R] COG3136 Uncharacterized membrane protein required for alginate biosynthesis
27 gi|11497077|ref|NP_051188.1|(removed signalp:1-22) rev protein (BB_P27) [Borrelia burgdorferi B31] 138 COG1018 2-127 -6.980 [M] COG3203 Outer membrane protein (porin)
28 gi|11497078|ref|NP_051189.1|(removed signalp:1-22) lipoprotein (BB_P28) [Borrelia burgdorferi B31] 126 COG1018 36-87 -6.270 15  [S] COG1356 Uncharacterized protein conserved in archaea
29 gi|11497079|ref|NP_051190.1| hypothetical protein (BB_P29) [Borrelia burgdorferi B31] 337 COG1018 2-303 -6.140 [U] KOG0946 ER-Golgi vesicle-tethering protein p115
30 gi|11497080|ref|NP_051191.1| hypothetical protein (BB_P30) [Borrelia burgdorferi B31] 366 COG1018 185-315 -7.640 [S] COG3471 Predicted periplasmic/secreted protein
31 gi|11497081|ref|NP_051192.1| hypothetical protein (BB_P31) [Borrelia burgdorferi B31] 188 COG1018 44-185 -6.580 15  [R] COG1461 Predicted kinase related to dihydroxyacetone kinase
32 gi|11497082|ref|NP_051193.1| plasmid partition protein, putative (BB_P32) [Borrelia burgdorferi B31] 246 COG1018 5-246 -76.100 22  [D] COG1192 ATPases involved in chromosome partitioning
33 gi|11497083|ref|NP_051194.1| hypothetical protein (BB_P33) [Borrelia burgdorferi B31] 202 COG1018 49-109 -7.250 21  [S] COG5566 Uncharacterized conserved protein
34 gi|11497084|ref|NP_051195.1| BdrA (BB_P34) [Borrelia burgdorferi B31] 210 COG1018 2-207 -15.200 14  [U] KOG4809 Rab6 GTPase-interacting protein involved in endosome-to-TGN transport
35 gi|11497085|ref|NP_051196.1| BppA (BB_P35) [Borrelia burgdorferi B31] 441 COG1018 40-408 -57.600 15  [L] COG5377 Phage-related protein, predicted endonuclease
36 gi|11497086|ref|NP_051197.1| BppB (BB_P36) [Borrelia burgdorferi B31] 141 COG1018 5-121 -7.330 15  [R] COG2252 Permeases
37 gi|11497087|ref|NP_051198.1| BppC (BB_P37) [Borrelia burgdorferi B31] 258 COG1018 1-257 -83.100 14  [L] COG4973 Site-specific recombinase XerC
38 gi|11497061|ref|NP_051199.1| ErpA (BB_P38) [Borrelia burgdorferi B31] 173 COG1018 4-167 -5.700 [NU] COG3168 Tfp pilus assembly protein PilP
39 gi|11497062|ref|NP_051200.1| ErpB (BB_P39) [Borrelia burgdorferi B31] 378 COG1018 17-262 -14.200 [R] KOG2295 C2H2 Zn-finger protein
60-377 -12.700 [P] KOG4505 Na+/H+ antiporter
40 gi|11497088|ref|NP_051201.1| hypothetical protein (BB_P40) [Borrelia burgdorferi B31] 193 COG1018 6-192 -6.010 [U] KOG3771 Amphiphysin

FFAS is supported by the NIH grant R01-GM087218-01
1 3 5 0 8 7   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.