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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 1693next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|11497090|ref|NP_051162.1| hypothetical protein (BB_P01) [Borrelia burgdorferi B31] 407 CSGID 194-390 -5.850 15  IDP06003 SF-assemblin, putative [Toxoplasma gondii ME49] EEB00658 [Toxoplasma gondii ME49]
2 gi|11497091|ref|NP_051163.1| hypothetical protein (BB_P02) [Borrelia burgdorferi B31] 230 CSGID 3-147 -5.650 IDP04088 putative lipoprotein [Clostridium perfringens ATCC 13124] CPF_2931 [Clostridium perfringens ATCC 13124]
3 gi|11497092|ref|NP_051164.1| hypothetical protein (BB_P03) [Borrelia burgdorferi B31] 185 CSGID 12-159 -7.760 13  IDP92061 ubiquitin-conjugating enzyme E2, putative [Toxoplasma gondii ME49] TGME49_063490 [Toxoplasma gondii ME49]
4 gi|11497093|ref|NP_051165.1| hypothetical protein (BB_P04) [Borrelia burgdorferi B31] 254 CSGID 13-254 -7.660 IDP04201 sensor histidine kinase [Clostridium perfringens ATCC 13124] CPF_0499 [Clostridium perfringens ATCC 13124]
5 gi|11497094|ref|NP_051166.1| hypothetical protein (BB_P05) [Borrelia burgdorferi B31] 190 CSGID 60-166 -7.350 17  IDP90187 gene: CPXV043 CDS; CPXV043 protein AAM13490.1 [Cowpox virus (Brighton Red)]
6 gi|11497064|ref|NP_051167.1| hypothetical protein (BB_P06) [Borrelia burgdorferi B31] 324 CSGID 144-242 -6.690 18  IDP92754 hypothetical protein [Vibrio cholerae O1 biovar El Tor] AGG09415 [Vibrio cholerae O1 biovar El Tor]
7 gi|11497065|ref|NP_051168.1| hypothetical protein (BB_P07) [Borrelia burgdorferi B31] 153 CSGID 14-113 -5.770 11  IDP05226 putative membrane associated lipoprotein [Listeria monocytogenes EGD-e] lmo0460 [Listeria monocytogenes EGD-e]
8 gi|11497066|ref|NP_051169.1| hypothetical protein (BB_P08) [Borrelia burgdorferi B31] 133 CSGID 96-133 -6.850 15  IDP91671 VK03_VACCC [Vaccinia virus Copenhagen]
9 gi|11497067|ref|NP_051170.1| hypothetical protein (BB_P09) [Borrelia burgdorferi B31] 129 CSGID 3-127 -58.900 18  IDP95026 Set165a_027 [Vibrio cholerae O1 biovar El Tor]
10 gi|11497068|ref|NP_051171.1| hypothetical protein (BB_P10) [Borrelia burgdorferi B31] 188 CSGID 1-185 -5.930 15  IDP91444 hypothetical protein VV1_0416 [Vibrio vulnificus CMCP6] VV1_0416 [Vibrio vulnificus CMCP6]
11 gi|11497095|ref|NP_051172.1| hypothetical protein (BB_P11) [Borrelia burgdorferi B31] 370 CSGID 1-290 -5.040 14  IDP00678 gene: era; GTP-binding protein Era SACOL1624 [Staphylococcus aureus subsp. aureus COL]
12 gi|11497096|ref|NP_051173.1| hypothetical protein (BB_P12) [Borrelia burgdorferi B31] 142 CSGID 5-100 -5.580 IDP05485 putative lipoprotein [Bacillus anthracis str. Ames] BA_3234 [Bacillus anthracis str. Ames]
13 gi|11497097|ref|NP_051174.1| hypothetical protein (BB_P13) [Borrelia burgdorferi B31] 151 CSGID 10-104 -5.640 18  IDP04061 gene: YPCD1.07; hypothetical protein YPCD1.07 [Yersinia pestis CO92] YPCD1.07 [Yersinia pestis CO92]
14 gi|11497098|ref|NP_051175.1| hypothetical protein (BB_P14) [Borrelia burgdorferi B31] 78 CSGID 3-75 -6.810 11  IDP90647 gene: metF; 5,10-methylenetetrahydrofolate reductase [Vibrio cholerae O1 biovar eltor str. N16961] VC2685 [Vibrio cholerae O1 biovar El Tor str. N16961]
15 gi|11497099|ref|NP_051176.1| hypothetical protein (BB_P15) [Borrelia burgdorferi B31] 424 CSGID 1-405 -12.700 IDP95025 Set165a_026 [Vibrio cholerae O1 biovar El Tor]
16 gi|11497100|ref|NP_051177.1| hypothetical protein (BB_P16) [Borrelia burgdorferi B31] 227 CSGID 95-224 -6.950 10  IDP92753 hypothetical protein [Vibrio cholerae O1 biovar El Tor] AGG09417 [Vibrio cholerae O1 biovar El Tor]
17 gi|11497101|ref|NP_051178.1| hypothetical protein (BB_P17) [Borrelia burgdorferi B31] 316 CSGID 34-95 -4.610 18  IDP06286 gene: infA; translation initiation factor IF-1 [Streptococcus pneumoniae TIGR4] NP_344772 [Streptococcus pneumoniae TIGR4]
18 gi|11497102|ref|NP_051179.1| hypothetical protein (BB_P18) [Borrelia burgdorferi B31] 181 CSGID 34-80 -6.380 23  IDP01111 Major cold shock protein cspA BA_1135 [Bacillus anthracis str. Ames]
19 gi|11497069|ref|NP_051180.1| hypothetical protein (BB_P19) [Borrelia burgdorferi B31] 110 CSGID 18-109 -11.000 13  IDP91459 dTDP-glucose pyrophosphorylase [Vibrio vulnificus CMCP6] VV1_0096 [Vibrio vulnificus CMCP6]
20 gi|11497070|ref|NP_051181.1| hypothetical protein (BB_P20) [Borrelia burgdorferi B31] 291 CSGID 1-273 -13.200 IDP91460 Phage-related baseplate assembly protein [Vibrio vulnificus CMCP6] VV1_0095 [Vibrio vulnificus CMCP6]

FFAS is supported by the NIH grant R01-GM087218-01
1 3 3 6 6 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Reed JC, Doctor K, Rojas A, Zapata JM, Stehlik C, Fiorentino L, Damiano J, Roth W, Matsuzawa S, Newman R, Takayama S, Marusawa H, Xu F, Salvesen G, Godzik A.; RIKEN GER Group; GSL Members. Comparative analysis of apoptosis and inflammation genes of mice and humans. Genome Res. 2003 Jun;13(6B):1376-88.