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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 1693next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|11497090|ref|NP_051162.1| hypothetical protein (BB_P01) [Borrelia burgdorferi B31] 407 HGM_OVER 194-323 -3.060 16  PB202086 Q8G498_BIFLO/2-200 PB202086; Pfam-B_202086;
2 gi|11497091|ref|NP_051163.1| hypothetical protein (BB_P02) [Borrelia burgdorferi B31] 230 HGM_OVER 75-106 -2.850 15  HGC00762 gi|162641591|dbj|BAAX01018014.1|1.0 TMP00997;
3 gi|11497092|ref|NP_051164.1| hypothetical protein (BB_P03) [Borrelia burgdorferi B31] 185 HGM_OVER 104-180 -4.090 10  PB032242 Q8FLW6_COREF/1-257 PB032242; Pfam-B_32242;
4 gi|11497093|ref|NP_051165.1| hypothetical protein (BB_P04) [Borrelia burgdorferi B31] 254 HGM_OVER 1-174 -3.830 PB015266 gi|154494998|ref|ZP_02034003.1| hypothetical protein PARMER_04044 [Parabacteroides merdae ATCC 43184]gi|154085548|gb|EDN84593.1| hypothetical protein PARMER_04044 [Parabacteroides merdae ATCC 43184]
5 gi|11497094|ref|NP_051166.1| hypothetical protein (BB_P05) [Borrelia burgdorferi B31] 190 HGM_OVER 106-188 -4.730 13  PB032242 Q8FLW6_COREF/1-257 PB032242; Pfam-B_32242;
6 gi|11497064|ref|NP_051167.1| hypothetical protein (BB_P06) [Borrelia burgdorferi B31] 324 HGM_OVER 143-263 -3.510 16  HGC00803 gi|163280588|dbj|BABD01030100.1|2.0 TMP01051;
7 gi|11497065|ref|NP_051168.1| hypothetical protein (BB_P07) [Borrelia burgdorferi B31] 153 HGM_OVER 4-115 -5.840 PB009534 gi|153852721|ref|ZP_01994158.1| hypothetical protein DORLON_00140 [Dorea longicatena DSM 13814]gi|149754363|gb|EDM64294.1| hypothetical protein DORLON_00140 [Dorea longicatena DSM 13814]
8 gi|11497066|ref|NP_051169.1| hypothetical protein (BB_P08) [Borrelia burgdorferi B31] 133 HGM_OVER 7-131 -3.060 HGC00683 gi|163310582|dbj|BABD01000118.1|4.0 TMP00861;
9 gi|11497067|ref|NP_051170.1| hypothetical protein (BB_P09) [Borrelia burgdorferi B31] 129 HGM_OVER 7-129 -4.620 HGC00044 gi|162658718|dbj|BAAX01000887.1|1.0 TMP00920;
10 gi|11497068|ref|NP_051171.1| hypothetical protein (BB_P10) [Borrelia burgdorferi B31] 188 HGM_OVER 16-121 -4.140 12  PB002104 Q72PH8_LEPIC/1-220 PB002104; Pfam-B_2104;
11 gi|11497095|ref|NP_051172.1| hypothetical protein (BB_P11) [Borrelia burgdorferi B31] 370 HGM_OVER 33-238 -3.580 11  HGC00024 gi|162813637|dbj|BABA01031072.1|2.0 TMP01508;
12 gi|11497096|ref|NP_051173.1| hypothetical protein (BB_P12) [Borrelia burgdorferi B31] 142 HGM_OVER 1-124 -4.180 12  PB032818 Q5LA03_BACFN/1-211 PB032818; Pfam-B_32818;
13 gi|11497097|ref|NP_051174.1| hypothetical protein (BB_P13) [Borrelia burgdorferi B31] 151 HGM_OVER 1-149 -3.790 15  PB000119 Q6KIT1_MYCMO/1-381 PB000119; Pfam-B_119;
14 gi|11497098|ref|NP_051175.1| hypothetical protein (BB_P14) [Borrelia burgdorferi B31] 78 HGM_OVER 8-64 -2.610 19  HGC00803 gi|163280588|dbj|BABD01030100.1|2.0 TMP01051;
15 gi|11497099|ref|NP_051176.1| hypothetical protein (BB_P15) [Borrelia burgdorferi B31] 424 HGM_OVER 14-84 -4.530 22  PB003142 Q8DVS6_STRMU/1-162 PB003142; Pfam-B_3142;
16 gi|11497100|ref|NP_051177.1| hypothetical protein (BB_P16) [Borrelia burgdorferi B31] 227 HGM_OVER 1-70 -3.020 12  HGC00311 gi|163635536|dbj|BABG01000737.1|2.0 TMP00178;
17 gi|11497101|ref|NP_051178.1| hypothetical protein (BB_P17) [Borrelia burgdorferi B31] 316 HGM_OVER 7-202 -3.280 10  PB015954 Q6WBB3_BIFBR/1-225 PB015954; Pfam-B_15954;
18 gi|11497102|ref|NP_051179.1| hypothetical protein (BB_P18) [Borrelia burgdorferi B31] 181 HGM_OVER 24-178 -4.030 10  HGC01024 gi|162869036|dbj|BABB01000971.1|4.0 TMP01399;
19 gi|11497069|ref|NP_051180.1| hypothetical protein (BB_P19) [Borrelia burgdorferi B31] 110 HGM_OVER 53-103 -3.360 PB022506 Q11RP6_CYTH3/1-298 PB022506; Pfam-B_22506;
20 gi|11497070|ref|NP_051181.1| hypothetical protein (BB_P20) [Borrelia burgdorferi B31] 291 HGM_OVER 124-239 -4.280 HGC00789 gi|163310627|dbj|BABD01000073.1|7.0 TMP01036;


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Li W, Godzik A. In search for more accurate alignments in the twilight zone. Protein Sci. 2002 Jul;11(7):1702-13.