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Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:

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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 1693next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|11497090|ref|NP_051162.1| hypothetical protein (BB_P01) [Borrelia burgdorferi B31] 407 NEW_HUMAN_DOMAINS 161-263 -5.070 22  sp|Q8WXH0|SYNE2_HUMAN Nesprin-2 OS=Homo sapiens GN=SYNE2 PE=1 SV=3 (Range: 4241-4332)
2 gi|11497091|ref|NP_051163.1| hypothetical protein (BB_P02) [Borrelia burgdorferi B31] 230 NEW_HUMAN_DOMAINS 88-173 -5.060 15  tr|Q86X87|Q86X87_HUMAN HCG39249, isoform CRA_d OS=Homo sapiens GN=UBOX5 PE=2 SV=1 (Range: 1-83)
3 gi|11497092|ref|NP_051164.1| hypothetical protein (BB_P03) [Borrelia burgdorferi B31] 185 NEW_HUMAN_DOMAINS 75-144 -5.410 18  sp|Q8N7G0|PO5F2_HUMAN POU domain, class 5, transcription factor 2 OS=Homo sapiens GN=POU5F2 PE=2 SV=1 (Range: 26-113)
4 gi|11497093|ref|NP_051165.1| hypothetical protein (BB_P04) [Borrelia burgdorferi B31] 254 NEW_HUMAN_DOMAINS 139-176 -5.360 18  sp|P56715|RP1_HUMAN Oxygen-regulated protein 1 OS=Homo sapiens GN=RP1 PE=1 SV=1 (Range: 1905-1964)
5 gi|11497094|ref|NP_051166.1| hypothetical protein (BB_P05) [Borrelia burgdorferi B31] 190 NEW_HUMAN_DOMAINS 101-188 -6.600 17  sp|Q96AQ9|F131C_HUMAN Protein FAM131C OS=Homo sapiens GN=FAM131C PE=2 SV=2 (Range: 1-119)
6 gi|11497064|ref|NP_051167.1| hypothetical protein (BB_P06) [Borrelia burgdorferi B31] 324 NEW_HUMAN_DOMAINS 67-237 -5.770 16  sp|Q6ZMJ4|IL34_HUMAN Interleukin-34 OS=Homo sapiens GN=IL34 PE=1 SV=1 (Range: 21-190)
7 gi|11497065|ref|NP_051168.1| hypothetical protein (BB_P07) [Borrelia burgdorferi B31] 153 NEW_HUMAN_DOMAINS 14-54 -6.130 17  sp|A6NNG1|F86C1_HUMAN Putative protein FAM86C-like 1 OS=Homo sapiens PE=3 SV=2 (Range: 54-122)
8 gi|11497066|ref|NP_051169.1| hypothetical protein (BB_P08) [Borrelia burgdorferi B31] 133 NEW_HUMAN_DOMAINS 1-15 -8.540 46  tr|E9PH94|E9PH94_HUMAN Uncharacterized protein OS=Homo sapiens GN=C5orf42 PE=4 SV=1 (Range: 1238-1290)
9 gi|11497067|ref|NP_051170.1| hypothetical protein (BB_P09) [Borrelia burgdorferi B31] 129 NEW_HUMAN_DOMAINS 29-128 -6.350 13  sp|Q8WY54|PPM1E_HUMAN Protein phosphatase 1E OS=Homo sapiens GN=PPM1E PE=1 SV=2 (Range: 132-223)
10 gi|11497068|ref|NP_051171.1| hypothetical protein (BB_P10) [Borrelia burgdorferi B31] 188 NEW_HUMAN_DOMAINS 13-58 -6.120 sp|Q8ND23|LR16B_HUMAN Leucine-rich repeat-containing protein 16B OS=Homo sapiens GN=LRRC16B PE=2 SV=2 (Range: 1-120)
11 gi|11497095|ref|NP_051172.1| hypothetical protein (BB_P11) [Borrelia burgdorferi B31] 370 NEW_HUMAN_DOMAINS 142-369 -5.150 18  sp|Q9UK61|CC063_HUMAN Uncharacterized protein C3orf63 OS=Homo sapiens GN=C3orf63 PE=1 SV=3 (Range: 1205-1474)
12 gi|11497096|ref|NP_051173.1| hypothetical protein (BB_P12) [Borrelia burgdorferi B31] 142 NEW_HUMAN_DOMAINS 49-132 -9.450 14  sp|Q9UIF9|BAZ2A_HUMAN Bromodomain adjacent to zinc finger domain protein 2A OS=Homo sapiens GN=BAZ2A PE=1 SV=4 (Range: 911-1016)
13 gi|11497097|ref|NP_051174.1| hypothetical protein (BB_P13) [Borrelia burgdorferi B31] 151 NEW_HUMAN_DOMAINS 26-114 -6.240 15  sp|Q92508|PIEZ1_HUMAN Piezo-type mechanosensitive ion channel component 1 OS=Homo sapiens GN=PIEZO1 PE=1 SV=4 (Range: 1060-1159)
14 gi|11497098|ref|NP_051175.1| hypothetical protein (BB_P14) [Borrelia burgdorferi B31] 78 NEW_HUMAN_DOMAINS 4-43 -5.960 15  sp|Q5JVF3|PCID2_HUMAN PCI domain-containing protein 2 OS=Homo sapiens GN=PCID2 PE=1 SV=2 (Range: 52-120)
15 gi|11497099|ref|NP_051176.1| hypothetical protein (BB_P15) [Borrelia burgdorferi B31] 424 NEW_HUMAN_DOMAINS 14-359 -4.790 11  sp|Q9P1Z9|CI174_HUMAN Uncharacterized protein C9orf174 OS=Homo sapiens GN=C9orf174 PE=1 SV=2 (Range: 319-675)
16 gi|11497100|ref|NP_051177.1| hypothetical protein (BB_P16) [Borrelia burgdorferi B31] 227 NEW_HUMAN_DOMAINS 66-114 -6.100 sp|Q8NHU2|CT026_HUMAN Uncharacterized protein C20orf26 OS=Homo sapiens GN=C20orf26 PE=2 SV=3 (Range: 375-462)
17 gi|11497101|ref|NP_051178.1| hypothetical protein (BB_P17) [Borrelia burgdorferi B31] 316 NEW_HUMAN_DOMAINS 31-178 -5.980 10  sp|Q12789|TF3C1_HUMAN General transcription factor 3C polypeptide 1 OS=Homo sapiens GN=GTF3C1 PE=1 SV=4 (Range: 1-174)
18 gi|11497102|ref|NP_051179.1| hypothetical protein (BB_P18) [Borrelia burgdorferi B31] 181 NEW_HUMAN_DOMAINS 42-95 -6.280 14  sp|A6H8M9|CDHR4_HUMAN Cadherin-related family member 4 OS=Homo sapiens GN=CDHR4 PE=2 SV=1 (Range: 17-129)
19 gi|11497069|ref|NP_051180.1| hypothetical protein (BB_P19) [Borrelia burgdorferi B31] 110 NEW_HUMAN_DOMAINS 12-57 -6.140 26  sp|O14917|PCD17_HUMAN Protocadherin-17 OS=Homo sapiens GN=PCDH17 PE=2 SV=2 (Range: 762-833)
20 gi|11497070|ref|NP_051181.1| hypothetical protein (BB_P20) [Borrelia burgdorferi B31] 291 NEW_HUMAN_DOMAINS 1-102 -4.880 sp|Q96PN6|ADCYA_HUMAN Adenylate cyclase type 10 OS=Homo sapiens GN=ADCY10 PE=1 SV=3 (Range: 1359-1471)


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;