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Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:

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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 1693next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|11497090|ref|NP_051162.1| hypothetical protein (BB_P01) [Borrelia burgdorferi B31] 407 VFDB 17-398 -21.000 15  [S] COG3567 Uncharacterized protein conserved in bacteria
2 gi|11497091|ref|NP_051163.1| hypothetical protein (BB_P02) [Borrelia burgdorferi B31] 230 VFDB 1-131 -7.760 14  [K] KOG4479 Transcription factor e(y)2
3 gi|11497092|ref|NP_051164.1| hypothetical protein (BB_P03) [Borrelia burgdorferi B31] 185 VFDB 12-158 -8.160 14  [O] KOG0419 Ubiquitin-protein ligase
4 gi|11497093|ref|NP_051165.1| hypothetical protein (BB_P04) [Borrelia burgdorferi B31] 254 VFDB 144-250 -6.660 [S] COG3692 Uncharacterized protein conserved in bacteria
5 gi|11497094|ref|NP_051166.1| hypothetical protein (BB_P05) [Borrelia burgdorferi B31] 190 VFDB 80-142 -5.760 14  [S] COG4765 Uncharacterized protein conserved in bacteria
6 gi|11497064|ref|NP_051167.1| hypothetical protein (BB_P06) [Borrelia burgdorferi B31] 324 VFDB 65-320 -7.020 10  [S] COG4834 Uncharacterized protein conserved in bacteria
7 gi|11497065|ref|NP_051168.1| hypothetical protein (BB_P07) [Borrelia burgdorferi B31] 153 VFDB 31-118 -5.010 [S] COG3361 Uncharacterized conserved protein
8 gi|11497066|ref|NP_051169.1| hypothetical protein (BB_P08) [Borrelia burgdorferi B31] 133 VFDB 29-130 -38.300 [R] COG5614 Bacteriophage head-tail adaptor
9 gi|11497067|ref|NP_051170.1| hypothetical protein (BB_P09) [Borrelia burgdorferi B31] 129 VFDB 52-129 -15.300 [R] COG5005 Mu-like prophage protein gpG
10 gi|11497068|ref|NP_051171.1| hypothetical protein (BB_P10) [Borrelia burgdorferi B31] 188 VFDB 29-180 -6.070 13  [O] KOG0855 Alkyl hydroperoxide reductase, thiol specific antioxidant and related enzymes
11 gi|11497095|ref|NP_051172.1| hypothetical protein (BB_P11) [Borrelia burgdorferi B31] 370 VFDB 203-370 -5.950 12  [O] COG3175 Cytochrome oxidase assembly factor
12 gi|11497096|ref|NP_051173.1| hypothetical protein (BB_P12) [Borrelia burgdorferi B31] 142 VFDB 10-131 -6.070 13  [S] COG3358 Uncharacterized conserved protein
13 gi|11497097|ref|NP_051174.1| hypothetical protein (BB_P13) [Borrelia burgdorferi B31] 151 VFDB 1-151 -7.010 10  [U] KOG1688 Golgi proteins involved in ER retention (RER)
14 gi|11497098|ref|NP_051175.1| hypothetical protein (BB_P14) [Borrelia burgdorferi B31] 78 VFDB 3-75 -6.850 13  [E] COG0685 5,10-methylenetetrahydrofolate reductase
15 gi|11497099|ref|NP_051176.1| hypothetical protein (BB_P15) [Borrelia burgdorferi B31] 424 VFDB 1-423 -13.100 10  [S] COG5280 Phage-related minor tail protein
16 gi|11497100|ref|NP_051177.1| hypothetical protein (BB_P16) [Borrelia burgdorferi B31] 227 VFDB 2-77 -5.200 15  [R] KOG2321 WD40 repeat protein
17 gi|11497101|ref|NP_051178.1| hypothetical protein (BB_P17) [Borrelia burgdorferi B31] 316 VFDB 36-96 -4.660 26  [S] COG2914 Uncharacterized protein conserved in bacteria
18 gi|11497102|ref|NP_051179.1| hypothetical protein (BB_P18) [Borrelia burgdorferi B31] 181 VFDB 13-171 -6.420 10  [S] COG4384 Mu-like prophage protein gp45
19 gi|11497069|ref|NP_051180.1| hypothetical protein (BB_P19) [Borrelia burgdorferi B31] 110 VFDB 1-110 -11.200 16  [S] COG4381 Mu-like prophage protein gp46
20 gi|11497070|ref|NP_051181.1| hypothetical protein (BB_P20) [Borrelia burgdorferi B31] 291 VFDB 65-276 -16.800 12  [S] COG3299 Uncharacterized homolog of phage Mu protein gp47


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Rychlewski L, Jaroszewski L, Li W, Godzik A. Comparison of sequence profiles. Strategies for structural predictions using sequence information. Protein Sci. 2000 Feb;9(2):232-41.