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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 4678next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|60680547|ref|YP_210691.1| hypothetical protein (BF1003) [Bacteroides fragilis NCTC 9343] (Range: 1-117) 117 NEW_HUMAN_DOMAINS 67-111 -6.520 20  tr|B7Z293|B7Z293_HUMAN Uncharacterized protein OS=Homo sapiens GN=ZMYND11 PE=2 SV=1 (Range: 1-99)
2 gi|60680256|ref|YP_210400.1| hypothetical protein (BF0697) [Bacteroides fragilis NCTC 9343] (Range: 1-74) 74 NEW_HUMAN_DOMAINS 39-74 -10.500 25  sp|P04035|HMDH_HUMAN 3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Homo sapiens GN=HMGCR PE=1 SV=1 (Range: 280-425)
3 gi|60681449|ref|YP_211593.1| MatE family transmembrane protein (BF1960) [Bacteroides fragilis NCTC 9343] (Range: 1-447) 447 NEW_HUMAN_DOMAINS 1-42 -4.030 19  sp|Q86UW7|CAPS2_HUMAN Calcium-dependent secretion activator 2 OS=Homo sapiens GN=CADPS2 PE=1 SV=2 (Range: 895-954)
4 gi|60683425|ref|YP_213569.1| 30S ribosomal protein S14 (BF3990) [Bacteroides fragilis NCTC 9343] (Range: 1-99) 99 NEW_HUMAN_DOMAINS 3-99 -7.660 15  sp|Q6UB99|ANR11_HUMAN Ankyrin repeat domain-containing protein 11 OS=Homo sapiens GN=ANKRD11 PE=1 SV=3 (Range: 2455-2663)
5 gi|60682385|ref|YP_212529.1| putative CTP pyrophosphohydrolase (BF2916) [Bacteroides fragilis NCTC 9343] (Range: 1-130) 130 NEW_HUMAN_DOMAINS 34-59 -7.830 15  sp|Q7Z404|TMC4_HUMAN Transmembrane channel-like protein 4 OS=Homo sapiens GN=TMC4 PE=2 SV=3 (Range: 271-348)
6 gi|60680762|ref|YP_210906.1| putative transmembrane conjugate transposon protein (BF1242) [Bacteroides fragilis NCTC 9343] (Range: 1-110) 110 NEW_HUMAN_DOMAINS 6-24 -7.310 36  sp|Q8WUU8|TM174_HUMAN Transmembrane protein 174 OS=Homo sapiens GN=TMEM174 PE=2 SV=1 (Range: 119-198)
7 gi|60683330|ref|YP_213474.1| ATP-dependent protease ATP-binding subunit ClpX (BF3893) [Bacteroides fragilis NCTC 9343] (Range: 1-415) 415 NEW_HUMAN_DOMAINS 32-135 -7.490 sp|Q6P2S7|GNN_HUMAN Tetratricopeptide repeat protein GNN OS=Homo sapiens GN=GNN PE=2 SV=3 (Range: 217-335)
8 gi|60682477|ref|YP_212621.1|(removed signalp:1-23) hypothetical protein (BF3007) [Bacteroides fragilis NCTC 9343] (Range: 24-588) 565 NEW_HUMAN_DOMAINS 72-198 -28.200 10  sp|Q14674|ESPL1_HUMAN Separin OS=Homo sapiens GN=ESPL1 PE=1 SV=3 (Range: 717-845)
143-258 -16.200 sp|Q8TF17|S3TC2_HUMAN SH3 domain and tetratricopeptide repeats-containing protein 2 OS=Homo sapiens GN=SH3TC2 PE=1 SV=2 (Range: 596-735)
9 gi|60681243|ref|YP_211387.1| hypothetical protein (BF1751) [Bacteroides fragilis NCTC 9343] (Range: 1-157) 157 NEW_HUMAN_DOMAINS 2-32 -6.770 sp|Q9P260|K1468_HUMAN LisH domain and HEAT repeat-containing protein KIAA1468 OS=Homo sapiens GN=KIAA1468 PE=1 SV=2 (Range: 255-403)
10 gi|60682315|ref|YP_212459.1| hypothetical protein (BF2845) [Bacteroides fragilis NCTC 9343] (Range: 1-207) 207 NEW_HUMAN_DOMAINS 99-207 -6.750 20  sp|O00469|PLOD2_HUMAN Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 OS=Homo sapiens GN=PLOD2 PE=1 SV=2 (Range: 422-544)
11 gi|60680924|ref|YP_211068.1| putative anti-sigma factor (BF1413) [Bacteroides fragilis NCTC 9343] (Range: 1-311) 311 NEW_HUMAN_DOMAINS 105-267 -6.050 17  sp|Q5W0A0|F194B_HUMAN Protein FAM194B OS=Homo sapiens GN=FAM194B PE=2 SV=1 (Range: 457-696)
12 gi|60683563|ref|YP_213707.1| putative SufE Fe/S-cluster-related protein (BF4142) [Bacteroides fragilis NCTC 9343] (Range: 1-142) 142 NEW_HUMAN_DOMAINS 71-130 -5.660 13  tr|Q8WVX6|Q8WVX6_HUMAN Uncharacterized protein OS=Homo sapiens GN=WAPAL PE=2 SV=1 (Range: 326-402)
13 gi|60682225|ref|YP_212369.1| putative two component system response regulator (BF2753) [Bacteroides fragilis NCTC 9343] (Range: 1-225) 225 NEW_HUMAN_DOMAINS 1-126 -32.100 15  sp|Q9NX45|SOLH2_HUMAN Spermatogenesis- and oogenesis-specific basic helix-loop-helix-containing protein 2 OS=Homo sapiens GN=SOHLH2 PE=2 SV=2 (Range: 1-196)
14 gi|60682801|ref|YP_212945.1| nicotinate phosphoribosyltransferase (BF3334) [Bacteroides fragilis NCTC 9343] (Range: 1-388) 388 NEW_HUMAN_DOMAINS 131-193 -4.790 sp|P78385|KRT83_HUMAN Keratin, type II cuticular Hb3 OS=Homo sapiens GN=KRT83 PE=1 SV=2 (Range: 1-85)
15 gi|60680875|ref|YP_211019.1| hypothetical protein (BF1359) [Bacteroides fragilis NCTC 9343] (Range: 1-245) 245 NEW_HUMAN_DOMAINS 79-182 -6.750 sp|P18583|SON_HUMAN Protein SON OS=Homo sapiens GN=SON PE=1 SV=4 (Range: 606-751)
16 gi|60682029|ref|YP_212173.1| putative bifunctional CbiF/CbiG cobalamin biosynthesis protein (BF2549) [Bacteroides fragilis NCTC 9343] (Range: 1-599) 599 NEW_HUMAN_DOMAINS 352-442 -5.120 18  sp|Q5VW00|DC122_HUMAN DDB1- and CUL4-associated factor 12-like protein 2 OS=Homo sapiens GN=DCAF12L2 PE=2 SV=1 (Range: 359-463)
17 gi|60681247|ref|YP_211391.1| hypothetical protein (BF1755) [Bacteroides fragilis NCTC 9343] (Range: 1-299) 299 NEW_HUMAN_DOMAINS 223-290 -10.200 11  sp|Q14674|ESPL1_HUMAN Separin OS=Homo sapiens GN=ESPL1 PE=1 SV=3 (Range: 717-845)
18 gi|60681605|ref|YP_211749.1| hypothetical protein (BF2124) [Bacteroides fragilis NCTC 9343] (Range: 1-361) 361 NEW_HUMAN_DOMAINS 307-354 -7.130 17  sp|Q9H2P0|ADNP_HUMAN Activity-dependent neuroprotector homeobox protein OS=Homo sapiens GN=ADNP PE=1 SV=1 (Range: 446-529)
19 gi|60681337|ref|YP_211481.1| hypothetical protein (BF1846) [Bacteroides fragilis NCTC 9343] (Range: 1-71) 71 NEW_HUMAN_DOMAINS 33-71 -5.490 20  tr|E9PQV5|E9PQV5_HUMAN Uncharacterized protein OS=Homo sapiens GN=CCDC37 PE=4 SV=1 (Range: 55-117)
20 gi|60680681|ref|YP_210825.1| hypothetical protein (BF1156) [Bacteroides fragilis NCTC 9343] (Range: 1-221) 221 NEW_HUMAN_DOMAINS 59-182 -10.800 sp|Q6NSW7|NANP8_HUMAN Putative homeobox protein NANOGP8 OS=Homo sapiens GN=NANOGP8 PE=5 SV=1 (Range: 177-305)


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Igarashi Y, Eroshkin A, Gramatikova S, Gramatikoff K, Zhang Y, Smith JW,Osterman AL, Godzik A. CutDB: a proteolytic event database. Nucleic Acids Res. 2007 Jan;35(Database issue):D546-9. Epub 2006 Nov 16.