FFAS03 list of results B.thetaiotaomicron / PfamA30U

Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 4778 next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|29345411|ref|NP_808914.1| hypothetical protein BT_0001 [Bacteroides thetaiotaomicron VPI-5482] 205 PfamA30U 123-192 -6.670 14 PF05283.9; F6ZX51_ORNAN/2-123; Multi-glycosylated core protein 24 (MGC-24), sialomucin
2 gi|29345412|ref|NP_808915.1|(removed signal:1-19) hypothetical protein BT_0002 [Bacteroides thetaiotaomicron VPI-5482] 312 PfamA30U 103-205 -6.660 12 PF14344.4; A9AZA1_HERA2/30-148; Domain of unknown function (DUF4397 topsan)
3 gi|29345413|ref|NP_808916.1| hypothetical protein BT_0003 [Bacteroides thetaiotaomicron VPI-5482] 258 PfamA30U 4-124 -53.000 39 PF14848.4; J9QY98_RIEAN/3-123; DNA-binding domain
132-231 -44.500 39 PF14734.4; B3QWM9_CHLT3/130-225; Domain of unknown function (DUF4469 topsan) with IG-like fold
4 gi|29345414|ref|NP_808917.1| hypothetical protein BT_0004 [Bacteroides thetaiotaomicron VPI-5482] 222 PfamA30U 26-159 -6.790 13 PF08664.8; Q81S68_BACAN/159-299; YcbB domain
5 gi|29345415|ref|NP_808918.1| 30S ribosomal protein S17 BT_0005 [Bacteroides thetaiotaomicron VPI-5482] 178 PfamA30U 108-175 -49.700 47 PF00366.18; M9X2Z9_MANHA/10-77; Ribosomal protein S17
6 gi|29345416|ref|NP_808919.1| hypothetical protein BT_0006 [Bacteroides thetaiotaomicron VPI-5482] 148 PfamA30U 9-106 -7.470 17 PF15444.4; M3W3J1_FELCA/1-214; Transmembrane protein 247
7 gi|29345417|ref|NP_808920.1| hypothetical protein BT_0007 [Bacteroides thetaiotaomicron VPI-5482] 130 PfamA30U 62-102 -7.020 26 PF15183.4; D4A897_RAT/1-89; Melanocortin-2 receptor accessory protein family
8 gi|29345418|ref|NP_808921.1| hypothetical protein BT_0008 [Bacteroides thetaiotaomicron VPI-5482] 181 PfamA30U 24-181 -25.700 16 PF13673.5; R6CQE4_9CLOT/34-160; Acetyltransferase (GNAT) domain
9 gi|29345419|ref|NP_808922.1|(removed signal:1-26) phosphate-binding periplasmic protein precursor, putative ABC transporter BT_0009 [Bacteroides thetaiotaomicron VPI-5482] 343 PfamA30U 16-305 -37.300 15 PF12849.5; B6YQR6_AZOPC/32-299; PBP superfamily domain
10 gi|29345420|ref|NP_808923.1| hypothetical protein BT_0010 [Bacteroides thetaiotaomicron VPI-5482] 357 PfamA30U 248-355 -6.550 17 PF14878.4; J9E9T8_WUCBA/29-133; Death-like domain of SPT6
11 gi|29345421|ref|NP_808924.1| hypothetical protein BT_0011 [Bacteroides thetaiotaomicron VPI-5482] 282 PfamA30U 201-280 -11.500 23 PF15759.3; G5BQB5_HETGA/102-601; TMEM108 family
12 gi|29345422|ref|NP_808925.1|(removed signal:1-34) hypothetical protein BT_0012 [Bacteroides thetaiotaomicron VPI-5482] 354 PfamA30U 30-176 -7.050 9 PF03548.13; LOLA_PSEPK/34-197; Outer membrane lipoprotein carrier protein LolA
13 gi|29345423|ref|NP_808926.1| hypothetical protein BT_0013 [Bacteroides thetaiotaomicron VPI-5482] 180 PfamA30U 23-164 -8.190 17 PF08989.8; F2KUP1_PREDF/4-147; Domain of unknown function (DUF1896 topsan)
14 gi|29345424|ref|NP_808927.1| two-component system histidine kinase with response regulator receiver domain BT_0014 [Bacteroides thetaiotaomicron VPI-5482] 807 PfamA30U 327-391 -24.700 30 PF00512.23; Q55783_SYNY3/185-253; His Kinase A (phospho-acceptor) domain
344-535 -14.300 13 PF10090.7; V5SF53_9RHIZ/32-212; Histidine phosphotransferase
438-545 -39.900 43 PF02518.24; O52937_9CYAN/626-739; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
570-680 -27.900 20 PF00072.22; RSSB_ECOLI/10-121; Response regulator receiver domain
15 gi|29345425|ref|NP_808928.1| rteB, two-component system response regulator BT_0015 [Bacteroides thetaiotaomicron VPI-5482] 432 PfamA30U 4-111 -34.600 31 PF00072.22; RSSB_ECOLI/10-121; Response regulator receiver domain
62-350 -13.500 14 PF08298.9; YEAG_ECOLI/19-380; PrkA AAA domain
127-293 -78.000 46 PF00158.24; Q8E8E7_SHEON/154-320; Sigma-54 interaction domain
388-428 -12.700 34 PF02954.17; E4PKW5_MARAH/521-561; Bacterial regulatory protein, Fis family
16 gi|29345426|ref|NP_808929.1| hypothetical protein BT_0016 [Bacteroides thetaiotaomicron VPI-5482] 212 PfamA30U 2-211 -53.800 13 PF09357.8; F4C775_SPHS2/62-280; RteC protein
17 gi|29345427|ref|NP_808930.1| hypothetical protein BT_0017 [Bacteroides thetaiotaomicron VPI-5482] 315 PfamA30U 194-311 -8.110 9 PF07960.9; CBP4_CANAL/5-137; CBP4
18 gi|29345428|ref|NP_808931.1| hypothetical protein BT_0018 [Bacteroides thetaiotaomicron VPI-5482] 238 PfamA30U 36-127 -5.720 12 PF05189.11; E4X3C8_OIKDI/185-292; RNA 3`-terminal phosphate cyclase (RTC), insert domain
19 gi|29345429|ref|NP_808932.1| hypothetical protein BT_0019 [Bacteroides thetaiotaomicron VPI-5482] 106 PfamA30U 7-56 -7.750 16 PF06857.9; CITD_STRU0/4-85; Malonate decarboxylase delta subunit (MdcD)
20 gi|29345430|ref|NP_808933.1| hypothetical protein BT_0020 [Bacteroides thetaiotaomicron VPI-5482] 152 PfamA30U 1-151 -6.740 10 PF16439.3; R6WPX0_9PORP/21-235; Domain of unknown function (DUF5036 topsan)

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

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#	Query	Length	Result vs.	Range	Score	%id	Covered by template(s)
1	`gi\|29345411\|ref\|NP_808914.1\| hypothetical protein BT_0001 [Bacteroides thetaiotaomicron VPI-5482]`	`205`	`PfamA30U`	`123-192`	`-6.670`	`14`	`PF05283.9; F6ZX51_ORNAN/2-123; Multi-glycosylated core protein 24 (MGC-24), sialomucin`
2	`gi\|29345412\|ref\|NP_808915.1\|(removed signal:1-19) hypothetical protein BT_0002 [Bacteroides thetaiotaomicron VPI-5482]`	`312`	`PfamA30U`	`103-205`	`-6.660`	`12`	`PF14344.4; A9AZA1_HERA2/30-148; Domain of unknown function (DUF4397 topsan)`
3	`gi\|29345413\|ref\|NP_808916.1\| hypothetical protein BT_0003 [Bacteroides thetaiotaomicron VPI-5482]`	`258`	`PfamA30U`	`4-124`	`-53.000`	`39`	`PF14848.4; J9QY98_RIEAN/3-123; DNA-binding domain`
				`132-231`	`-44.500`	`39`	`PF14734.4; B3QWM9_CHLT3/130-225; Domain of unknown function (DUF4469 topsan) with IG-like fold`
4	`gi\|29345414\|ref\|NP_808917.1\| hypothetical protein BT_0004 [Bacteroides thetaiotaomicron VPI-5482]`	`222`	`PfamA30U`	`26-159`	`-6.790`	`13`	`PF08664.8; Q81S68_BACAN/159-299; YcbB domain`
5	`gi\|29345415\|ref\|NP_808918.1\| 30S ribosomal protein S17 BT_0005 [Bacteroides thetaiotaomicron VPI-5482]`	`178`	`PfamA30U`	`108-175`	`-49.700`	`47`	`PF00366.18; M9X2Z9_MANHA/10-77; Ribosomal protein S17`
6	`gi\|29345416\|ref\|NP_808919.1\| hypothetical protein BT_0006 [Bacteroides thetaiotaomicron VPI-5482]`	`148`	`PfamA30U`	`9-106`	`-7.470`	`17`	`PF15444.4; M3W3J1_FELCA/1-214; Transmembrane protein 247`
7	`gi\|29345417\|ref\|NP_808920.1\| hypothetical protein BT_0007 [Bacteroides thetaiotaomicron VPI-5482]`	`130`	`PfamA30U`	`62-102`	`-7.020`	`26`	`PF15183.4; D4A897_RAT/1-89; Melanocortin-2 receptor accessory protein family`
8	`gi\|29345418\|ref\|NP_808921.1\| hypothetical protein BT_0008 [Bacteroides thetaiotaomicron VPI-5482]`	`181`	`PfamA30U`	`24-181`	`-25.700`	`16`	`PF13673.5; R6CQE4_9CLOT/34-160; Acetyltransferase (GNAT) domain`
9	`gi\|29345419\|ref\|NP_808922.1\|(removed signal:1-26) phosphate-binding periplasmic protein precursor, putative ABC transporter BT_0009 [Bacteroides thetaiotaomicron VPI-5482]`	`343`	`PfamA30U`	`16-305`	`-37.300`	`15`	`PF12849.5; B6YQR6_AZOPC/32-299; PBP superfamily domain`
10	`gi\|29345420\|ref\|NP_808923.1\| hypothetical protein BT_0010 [Bacteroides thetaiotaomicron VPI-5482]`	`357`	`PfamA30U`	`248-355`	`-6.550`	`17`	`PF14878.4; J9E9T8_WUCBA/29-133; Death-like domain of SPT6`
11	`gi\|29345421\|ref\|NP_808924.1\| hypothetical protein BT_0011 [Bacteroides thetaiotaomicron VPI-5482]`	`282`	`PfamA30U`	`201-280`	`-11.500`	`23`	`PF15759.3; G5BQB5_HETGA/102-601; TMEM108 family`
12	`gi\|29345422\|ref\|NP_808925.1\|(removed signal:1-34) hypothetical protein BT_0012 [Bacteroides thetaiotaomicron VPI-5482]`	`354`	`PfamA30U`	`30-176`	`-7.050`	`9`	`PF03548.13; LOLA_PSEPK/34-197; Outer membrane lipoprotein carrier protein LolA`
13	`gi\|29345423\|ref\|NP_808926.1\| hypothetical protein BT_0013 [Bacteroides thetaiotaomicron VPI-5482]`	`180`	`PfamA30U`	`23-164`	`-8.190`	`17`	`PF08989.8; F2KUP1_PREDF/4-147; Domain of unknown function (DUF1896 topsan)`
14	`gi\|29345424\|ref\|NP_808927.1\| two-component system histidine kinase with response regulator receiver domain BT_0014 [Bacteroides thetaiotaomicron VPI-5482]`	`807`	`PfamA30U`	`327-391`	`-24.700`	`30`	`PF00512.23; Q55783_SYNY3/185-253; His Kinase A (phospho-acceptor) domain`
				`344-535`	`-14.300`	`13`	`PF10090.7; V5SF53_9RHIZ/32-212; Histidine phosphotransferase`
				`438-545`	`-39.900`	`43`	`PF02518.24; O52937_9CYAN/626-739; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase`
				`570-680`	`-27.900`	`20`	`PF00072.22; RSSB_ECOLI/10-121; Response regulator receiver domain`
15	`gi\|29345425\|ref\|NP_808928.1\| rteB, two-component system response regulator BT_0015 [Bacteroides thetaiotaomicron VPI-5482]`	`432`	`PfamA30U`	`4-111`	`-34.600`	`31`	`PF00072.22; RSSB_ECOLI/10-121; Response regulator receiver domain`
				`62-350`	`-13.500`	`14`	`PF08298.9; YEAG_ECOLI/19-380; PrkA AAA domain`
				`127-293`	`-78.000`	`46`	`PF00158.24; Q8E8E7_SHEON/154-320; Sigma-54 interaction domain`
				`388-428`	`-12.700`	`34`	`PF02954.17; E4PKW5_MARAH/521-561; Bacterial regulatory protein, Fis family`
16	`gi\|29345426\|ref\|NP_808929.1\| hypothetical protein BT_0016 [Bacteroides thetaiotaomicron VPI-5482]`	`212`	`PfamA30U`	`2-211`	`-53.800`	`13`	`PF09357.8; F4C775_SPHS2/62-280; RteC protein`
17	`gi\|29345427\|ref\|NP_808930.1\| hypothetical protein BT_0017 [Bacteroides thetaiotaomicron VPI-5482]`	`315`	`PfamA30U`	`194-311`	`-8.110`	`9`	`PF07960.9; CBP4_CANAL/5-137; CBP4`
18	`gi\|29345428\|ref\|NP_808931.1\| hypothetical protein BT_0018 [Bacteroides thetaiotaomicron VPI-5482]`	`238`	`PfamA30U`	`36-127`	`-5.720`	`12`	PF05189.11; E4X3C8_OIKDI/185-292; RNA 3`-terminal phosphate cyclase (RTC), insert domain
19	`gi\|29345429\|ref\|NP_808932.1\| hypothetical protein BT_0019 [Bacteroides thetaiotaomicron VPI-5482]`	`106`	`PfamA30U`	`7-56`	`-7.750`	`16`	`PF06857.9; CITD_STRU0/4-85; Malonate decarboxylase delta subunit (MdcD)`
20	`gi\|29345430\|ref\|NP_808933.1\| hypothetical protein BT_0020 [Bacteroides thetaiotaomicron VPI-5482]`	`152`	`PfamA30U`	`1-151`	`-6.740`	`10`	`PF16439.3; R6WPX0_9PORP/21-235; Domain of unknown function (DUF5036 topsan)`