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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 4053next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|15894240|ref|NP_347589.1| hypothetical protein (CA_C0953) [Clostridium acetobutylicum ATCC 824] (Range: 1-132) 132 JCSG0516 6-122 -7.460 17  RH10501D ZP_02090074.1 415447 Selected-2009-12-04
2 gi|15895268|ref|NP_348617.1| ABC-type transport system, ATPase component (CA_C1998) [Clostridium acetobutylicum ATCC 824] (Range: 1-224) 224 JCSG0516 1-224 -115.000 47  TM0352 TM0352 282227 Purified-2001-03-14
3 gi|15895079|ref|NP_348428.1| ribosome-binding factor A (CA_C1803) [Clostridium acetobutylicum ATCC 824] (Range: 1-121) 121 JCSG0516 2-121 -64.300 30  TM0855 TM0855 282725 PDB-2010-06-16
4 gi|15896238|ref|NP_349587.1| dimethyladenosine transferase (CA_C2986) [Clostridium acetobutylicum ATCC 824] (Range: 1-276) 276 JCSG0516 2-276 -107.000 38  TM1437 TM1437 283297 Purified-2004-02-02
5 gi|15894673|ref|NP_348022.1| phosphoribosylglycinamide formyltransferase (CA_C1394) [Clostridium acetobutylicum ATCC 824] (Range: 1-204) 204 JCSG0516 2-204 -83.200 40  TM1248 TM1248 283113 Crystal|NMR-2004-02-09
6 gi|15894664|ref|NP_348013.1| Alpha-ribazole-5'-phosphate phosphatase, CobC (CA_C1385) [Clostridium acetobutylicum ATCC 824] (Range: 1-191) 191 JCSG0516 2-191 -86.000 33  TM1374 TM1374 283235 Purified-2004-01-08
7 gi|15894369|ref|NP_347718.1| Beta-glucosidase family protein (CA_C1084) [Clostridium acetobutylicum ATCC 824] (Range: 1-474) 474 JCSG0516 12-466 -10.400 12  SP17078A ZP_02065779.1 408544 Selected-2009-11-12
60-469 -19.100 16  TT16503A YP_001636660.1 403870 Selected-2009-08-14
8 gi|15896898|ref|NP_350247.1| alpha/beta fold family hydrolase (CA_C3665) [Clostridium acetobutylicum ATCC 824] (Range: 1-265) 265 JCSG0516 1-264 -71.000 21  PU4107A NP_744385.1 381539 Purified-2009-01-30
9 gi|15895531|ref|NP_348880.1| ATP-dependent exonuclease synthesis protein AddB (CA_C2263) [Clostridium acetobutylicum ATCC 824] (Range: 1-500) 500 JCSG0516 5-499 -18.000 16  TM1238 TM1238 283103 Purified-2004-02-02
10 gi|15895531|ref|NP_348880.1| ATP-dependent exonuclease synthesis protein AddB (CA_C2263) [Clostridium acetobutylicum ATCC 824] (Range: 251-750) 500 JCSG0516 1-433 -14.100 15  TM1238 TM1238 283103 Purified-2004-02-02
11 gi|15895531|ref|NP_348880.1| ATP-dependent exonuclease synthesis protein AddB (CA_C2263) [Clostridium acetobutylicum ATCC 824] (Range: 501-1000) 500 JCSG0516 259-498 -12.300 15  FR14749B NP_816462.1 392602 Crystal|NMR-2009-05-21
12 gi|15895531|ref|NP_348880.1| ATP-dependent exonuclease synthesis protein AddB (CA_C2263) [Clostridium acetobutylicum ATCC 824] (Range: 751-1153) 403 JCSG0516 8-363 -12.900 16  TB5245A 13816693 358056 Purified-2004-06-03
13 gi|15895492|ref|NP_348841.1| chemotaxis protein CheW (CA_C2224) [Clostridium acetobutylicum ATCC 824] (Range: 1-147) 147 JCSG0516 1-147 -75.500 39  TM0718 TM0718 282588 Purified-2001-02-28
14 gi|15894672|ref|NP_348021.1| phosphoribosylaminoimidazole synthetase (CA_C1393) [Clostridium acetobutylicum ATCC 824] (Range: 1-332) 332 JCSG0516 2-327 -99.600 34  TM1251 TM1251 283116 Purified-2004-01-21
15 gi|15893880|ref|NP_347229.1| riboflavin synthase subunit alpha (CA_C0591) [Clostridium acetobutylicum ATCC 824] (Range: 1-213) 213 JCSG0516 1-199 -89.800 36  TM1827 TM1827 283680 Purified-2001-10-09
16 gi|15893578|ref|NP_346927.1| hypothetical protein (CA_C0286) [Clostridium acetobutylicum ATCC 824] (Range: 1-244) 244 JCSG0516 2-244 -30.300 15  TM1029 TM1029 282896 Purified-2001-12-12
17 gi|15896862|ref|NP_350211.1| oligopeptide ABC transporter, ATPase component (CA_C3628) [Clostridium acetobutylicum ATCC 824] (Range: 1-322) 322 JCSG0516 2-322 -140.000 54  TM1750 TM1750 283605 Purified-2004-07-19
18 gi|15895331|ref|NP_348680.1| segregation and condensation protein A (CA_C2061) [Clostridium acetobutylicum ATCC 824] (Range: 1-249) 249 JCSG0516 1-249 -95.100 35  PL5098B YP_384913.1 401502 Purified-2009-07-17
19 gi|15894096|ref|NP_347445.1| hydrogenase formation factor (hypE) (CA_C0809) [Clostridium acetobutylicum ATCC 824] (Range: 1-335) 335 JCSG0516 3-335 -101.000 44  FL10857A NP_281809.1 375685 Crystal|NMR-2007-06-16
20 gi|15895945|ref|NP_349294.1| DNA helicase (CA_C2687) [Clostridium acetobutylicum ATCC 824] (Range: 1-714) 714 JCSG0516 1-424 -30.600 17  WS.A20813A.DDX21 BC008071 423980 PDB-2013-01-16
2-677 -19.500 13  TM0173 TM0173 282053 Cloned-2002-06-25
6-344 -32.100 22  WT20667B.DDX6 BC065007 422785 Crystal|NMR-2011-11-15
9-471 -22.500 17  WS.A20811A.DDX1 BC053673 423964 Selected-2011-10-12


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Zmasek CM, Zhang Q, Ye Y, Godzik A. Surprising complexity of the ancestral apoptosis network. Genome Biol. 2007 Oct 24;8(10):R226 [Epub ahead of print]