FFAS03 list of results C.acetobutylicum / VFDB

Shows best template from each database, and all templates with significant scores covering different query fragments

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# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|15894240|ref|NP_347589.1| hypothetical protein (CA_C0953) [Clostridium acetobutylicum ATCC 824] (Range: 1-132) 132 VFDB 7-129 -4.050 9 VFG000739(gi:2865299) (eae) intimin [Intimin (VF0177)] [Escherichia coli O127:H6 str. E2348/69]
2 gi|15895268|ref|NP_348617.1| ABC-type transport system, ATPase component (CA_C1998) [Clostridium acetobutylicum ATCC 824] (Range: 1-224) 224 VFDB 4-224 -90.700 29 VFG002059(gi:15595271) (tagT) type six secretion associated protein TagT, ATP-binding component of ABC transporter [HSI-I (VF0334)] [Pseudomonas aeruginosa PAO1]
3 gi|15895079|ref|NP_348428.1| ribosome-binding factor A (CA_C1803) [Clostridium acetobutylicum ATCC 824] (Range: 1-121) 121 VFDB 19-96 -4.770 10 VFG001424(gi:2290538) (draE2) Dr-II structural adhesin precursor [Afa/Dr family (VF0212)] [Escherichia coli EC7372]
4 gi|15896238|ref|NP_349587.1| dimethyladenosine transferase (CA_C2986) [Clostridium acetobutylicum ATCC 824] (Range: 1-276) 276 VFDB 31-145 -8.790 15 VFG011677(gi:15792738) (Cj1420c) methyltransferase [Capsule biosynthesis and transport (CVF393)] [Campylobacter jejuni subsp. jejuni NCTC 11168]
5 gi|15894673|ref|NP_348022.1| phosphoribosylglycinamide formyltransferase (CA_C1394) [Clostridium acetobutylicum ATCC 824] (Range: 1-204) 204 VFDB 2-190 -58.500 21 VFG016016(gi:15597592) (pvdF) pyoverdine synthetase F [pyoverdine (IA001)] [Pseudomonas aeruginosa PAO1]
6 gi|15894664|ref|NP_348013.1| Alpha-ribazole-5'-phosphate phosphatase, CobC (CA_C1385) [Clostridium acetobutylicum ATCC 824] (Range: 1-191) 191 VFDB 6-146 -5.240 17 VFG042976(gi:29375667) (ebpA) endocarditis and biofilm-associated pilus tip protein EbpA [Ebp pili (VF0538)] [Enterococcus faecalis V583]
7 gi|15894369|ref|NP_347718.1| Beta-glucosidase family protein (CA_C1084) [Clostridium acetobutylicum ATCC 824] (Range: 1-474) 474 VFDB 70-469 -6.580 13 VFG041350(gi:52843057) (lgt2/legC8) Dot/Icm type IV secretion system effector Lgt2/LegC8, glucosyltransferase [Dot/Icm (SS047)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]
8 gi|15896898|ref|NP_350247.1| alpha/beta fold family hydrolase (CA_C3665) [Clostridium acetobutylicum ATCC 824] (Range: 1-265) 265 VFDB 5-260 -33.500 13 VFG000156(gi:15598675) (rhlA) rhamnosyltransferase chain A [Rhamnolipid (VF0089)] [Pseudomonas aeruginosa PAO1]
9 gi|15895531|ref|NP_348880.1| ATP-dependent exonuclease synthesis protein AddB (CA_C2263) [Clostridium acetobutylicum ATCC 824] (Range: 1-500) 500 VFDB 5-490 -6.210 9 VFG001844(gi:52840701) (icmB/dotO) Dot/Icm type IV secretion system protein IcmB/DotO [Dot/Icm (VF0156)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]
10 gi|15895531|ref|NP_348880.1| ATP-dependent exonuclease synthesis protein AddB (CA_C2263) [Clostridium acetobutylicum ATCC 824] (Range: 251-750) 500 VFDB 220-422 -4.560 10 VFG013491(gi:16273584) (lsgD) glycosyltransferase [LOS (CVF494)] [Haemophilus influenzae Rd KW20]
11 gi|15895531|ref|NP_348880.1| ATP-dependent exonuclease synthesis protein AddB (CA_C2263) [Clostridium acetobutylicum ATCC 824] (Range: 501-1000) 500 VFDB 37-498 -4.860 9 VFG002383(gi:15611007) (eccCb1) ESX-1 type VII secretion system FtsK/SpoIIIE family protein EccCb1 [ESX-1 (VF0315)] [Mycobacterium tuberculosis H37Rv]
12 gi|15895531|ref|NP_348880.1| ATP-dependent exonuclease synthesis protein AddB (CA_C2263) [Clostridium acetobutylicum ATCC 824] (Range: 751-1153) 403 VFDB 191-352 -4.710 14 VFG045503(gi:52841202) (lpg0967) Dot/Icm type IV secretion system effector [Dot/Icm (VF0156)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]
13 gi|15895492|ref|NP_348841.1| chemotaxis protein CheW (CA_C2224) [Clostridium acetobutylicum ATCC 824] (Range: 1-147) 147 VFDB 2-147 -76.000 32 VFG043210(gi:123442802) (cheW) purine-binding chemotaxis protein CheW [peritrichous flagella (AI145)] [Yersinia enterocolitica subsp. enterocolitica 8081]
14 gi|15894672|ref|NP_348021.1| phosphoribosylaminoimidazole synthetase (CA_C1393) [Clostridium acetobutylicum ATCC 824] (Range: 1-332) 332 VFDB 54-299 -5.160 12 VFG002557(gi:53720407) (wcbJ) capsular polysaccharide biosynthesis protein [Capsule I (VF0436)] [Burkholderia pseudomallei K96243]
15 gi|15893880|ref|NP_347229.1| riboflavin synthase subunit alpha (CA_C0591) [Clostridium acetobutylicum ATCC 824] (Range: 1-213) 213 VFDB 6-185 -6.460 13 VFG036938(gi:15676235) (farA) fatty acid efflux system protein FarA [FarAB (VF0450)] [Neisseria meningitidis MC58]
16 gi|15893578|ref|NP_346927.1| hypothetical protein (CA_C0286) [Clostridium acetobutylicum ATCC 824] (Range: 1-244) 244 VFDB 2-241 -16.900 11 VFG045333(gi:588561366) (llsH) ABC transporter permease protein LlsH [LLS (VF0410)] [Listeria innocua SLCC6294]
17 gi|15896862|ref|NP_350211.1| oligopeptide ABC transporter, ATPase component (CA_C3628) [Clostridium acetobutylicum ATCC 824] (Range: 1-322) 322 VFDB 8-287 -54.400 31 VFG001206(gi:15677997) (fbpC) iron(III) ABC transporter, ATP-binding protein [FbpABC (VF0272)] [Neisseria meningitidis MC58]
18 gi|15895331|ref|NP_348680.1| segregation and condensation protein A (CA_C2061) [Clostridium acetobutylicum ATCC 824] (Range: 1-249) 249 VFDB 47-103 -5.490 15 VFG036902(gi:15676453) (pilV) type IV pilus minor pilin PilV [Type IV pili (CVF189)] [Neisseria meningitidis MC58]
19 gi|15894096|ref|NP_347445.1| hydrogenase formation factor (hypE) (CA_C0809) [Clostridium acetobutylicum ATCC 824] (Range: 1-335) 335 VFDB 73-334 -5.490 9 VFG002313(gi:123443692) (pilQ) type IV pilus biogenesis protein PilQ [Type IV pili (VF0401)] [Yersinia enterocolitica subsp. enterocolitica 8081]
20 gi|15895945|ref|NP_349294.1| DNA helicase (CA_C2687) [Clostridium acetobutylicum ATCC 824] (Range: 1-714) 714 VFDB 10-567 -7.810 11 VFG001980(gi:121582664) (virD4) Type IV secretion system protein VirD4 [Type IV secretion system (VF0325)] [Campylobacter jejuni subsp. jejuni 81-176]

FFAS is supported by the NIH grant R01-GM087218-01

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#	Query	Length	Result vs.	Range	Score	%id	Covered by template(s)
1	`gi\|15894240\|ref\|NP_347589.1\| hypothetical protein (CA_C0953) [Clostridium acetobutylicum ATCC 824] (Range: 1-132)`	`132`	`VFDB`	`7-129`	`-4.050`	`9`	`VFG000739(gi:2865299) (eae) intimin [Intimin (VF0177)] [Escherichia coli O127:H6 str. E2348/69]`
2	`gi\|15895268\|ref\|NP_348617.1\| ABC-type transport system, ATPase component (CA_C1998) [Clostridium acetobutylicum ATCC 824] (Range: 1-224)`	`224`	`VFDB`	`4-224`	`-90.700`	`29`	`VFG002059(gi:15595271) (tagT) type six secretion associated protein TagT, ATP-binding component of ABC transporter [HSI-I (VF0334)] [Pseudomonas aeruginosa PAO1]`
3	`gi\|15895079\|ref\|NP_348428.1\| ribosome-binding factor A (CA_C1803) [Clostridium acetobutylicum ATCC 824] (Range: 1-121)`	`121`	`VFDB`	`19-96`	`-4.770`	`10`	`VFG001424(gi:2290538) (draE2) Dr-II structural adhesin precursor [Afa/Dr family (VF0212)] [Escherichia coli EC7372]`
4	`gi\|15896238\|ref\|NP_349587.1\| dimethyladenosine transferase (CA_C2986) [Clostridium acetobutylicum ATCC 824] (Range: 1-276)`	`276`	`VFDB`	`31-145`	`-8.790`	`15`	`VFG011677(gi:15792738) (Cj1420c) methyltransferase [Capsule biosynthesis and transport (CVF393)] [Campylobacter jejuni subsp. jejuni NCTC 11168]`
5	`gi\|15894673\|ref\|NP_348022.1\| phosphoribosylglycinamide formyltransferase (CA_C1394) [Clostridium acetobutylicum ATCC 824] (Range: 1-204)`	`204`	`VFDB`	`2-190`	`-58.500`	`21`	`VFG016016(gi:15597592) (pvdF) pyoverdine synthetase F [pyoverdine (IA001)] [Pseudomonas aeruginosa PAO1]`
6	`gi\|15894664\|ref\|NP_348013.1\| Alpha-ribazole-5'-phosphate phosphatase, CobC (CA_C1385) [Clostridium acetobutylicum ATCC 824] (Range: 1-191)`	`191`	`VFDB`	`6-146`	`-5.240`	`17`	`VFG042976(gi:29375667) (ebpA) endocarditis and biofilm-associated pilus tip protein EbpA [Ebp pili (VF0538)] [Enterococcus faecalis V583]`
7	`gi\|15894369\|ref\|NP_347718.1\| Beta-glucosidase family protein (CA_C1084) [Clostridium acetobutylicum ATCC 824] (Range: 1-474)`	`474`	`VFDB`	`70-469`	`-6.580`	`13`	`VFG041350(gi:52843057) (lgt2/legC8) Dot/Icm type IV secretion system effector Lgt2/LegC8, glucosyltransferase [Dot/Icm (SS047)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]`
8	`gi\|15896898\|ref\|NP_350247.1\| alpha/beta fold family hydrolase (CA_C3665) [Clostridium acetobutylicum ATCC 824] (Range: 1-265)`	`265`	`VFDB`	`5-260`	`-33.500`	`13`	`VFG000156(gi:15598675) (rhlA) rhamnosyltransferase chain A [Rhamnolipid (VF0089)] [Pseudomonas aeruginosa PAO1]`
9	`gi\|15895531\|ref\|NP_348880.1\| ATP-dependent exonuclease synthesis protein AddB (CA_C2263) [Clostridium acetobutylicum ATCC 824] (Range: 1-500)`	`500`	`VFDB`	`5-490`	`-6.210`	`9`	`VFG001844(gi:52840701) (icmB/dotO) Dot/Icm type IV secretion system protein IcmB/DotO [Dot/Icm (VF0156)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]`
10	`gi\|15895531\|ref\|NP_348880.1\| ATP-dependent exonuclease synthesis protein AddB (CA_C2263) [Clostridium acetobutylicum ATCC 824] (Range: 251-750)`	`500`	`VFDB`	`220-422`	`-4.560`	`10`	`VFG013491(gi:16273584) (lsgD) glycosyltransferase [LOS (CVF494)] [Haemophilus influenzae Rd KW20]`
11	`gi\|15895531\|ref\|NP_348880.1\| ATP-dependent exonuclease synthesis protein AddB (CA_C2263) [Clostridium acetobutylicum ATCC 824] (Range: 501-1000)`	`500`	`VFDB`	`37-498`	`-4.860`	`9`	`VFG002383(gi:15611007) (eccCb1) ESX-1 type VII secretion system FtsK/SpoIIIE family protein EccCb1 [ESX-1 (VF0315)] [Mycobacterium tuberculosis H37Rv]`
12	`gi\|15895531\|ref\|NP_348880.1\| ATP-dependent exonuclease synthesis protein AddB (CA_C2263) [Clostridium acetobutylicum ATCC 824] (Range: 751-1153)`	`403`	`VFDB`	`191-352`	`-4.710`	`14`	`VFG045503(gi:52841202) (lpg0967) Dot/Icm type IV secretion system effector [Dot/Icm (VF0156)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]`
13	`gi\|15895492\|ref\|NP_348841.1\| chemotaxis protein CheW (CA_C2224) [Clostridium acetobutylicum ATCC 824] (Range: 1-147)`	`147`	`VFDB`	`2-147`	`-76.000`	`32`	`VFG043210(gi:123442802) (cheW) purine-binding chemotaxis protein CheW [peritrichous flagella (AI145)] [Yersinia enterocolitica subsp. enterocolitica 8081]`
14	`gi\|15894672\|ref\|NP_348021.1\| phosphoribosylaminoimidazole synthetase (CA_C1393) [Clostridium acetobutylicum ATCC 824] (Range: 1-332)`	`332`	`VFDB`	`54-299`	`-5.160`	`12`	`VFG002557(gi:53720407) (wcbJ) capsular polysaccharide biosynthesis protein [Capsule I (VF0436)] [Burkholderia pseudomallei K96243]`
15	`gi\|15893880\|ref\|NP_347229.1\| riboflavin synthase subunit alpha (CA_C0591) [Clostridium acetobutylicum ATCC 824] (Range: 1-213)`	`213`	`VFDB`	`6-185`	`-6.460`	`13`	`VFG036938(gi:15676235) (farA) fatty acid efflux system protein FarA [FarAB (VF0450)] [Neisseria meningitidis MC58]`
16	`gi\|15893578\|ref\|NP_346927.1\| hypothetical protein (CA_C0286) [Clostridium acetobutylicum ATCC 824] (Range: 1-244)`	`244`	`VFDB`	`2-241`	`-16.900`	`11`	`VFG045333(gi:588561366) (llsH) ABC transporter permease protein LlsH [LLS (VF0410)] [Listeria innocua SLCC6294]`
17	`gi\|15896862\|ref\|NP_350211.1\| oligopeptide ABC transporter, ATPase component (CA_C3628) [Clostridium acetobutylicum ATCC 824] (Range: 1-322)`	`322`	`VFDB`	`8-287`	`-54.400`	`31`	`VFG001206(gi:15677997) (fbpC) iron(III) ABC transporter, ATP-binding protein [FbpABC (VF0272)] [Neisseria meningitidis MC58]`
18	`gi\|15895331\|ref\|NP_348680.1\| segregation and condensation protein A (CA_C2061) [Clostridium acetobutylicum ATCC 824] (Range: 1-249)`	`249`	`VFDB`	`47-103`	`-5.490`	`15`	`VFG036902(gi:15676453) (pilV) type IV pilus minor pilin PilV [Type IV pili (CVF189)] [Neisseria meningitidis MC58]`
19	`gi\|15894096\|ref\|NP_347445.1\| hydrogenase formation factor (hypE) (CA_C0809) [Clostridium acetobutylicum ATCC 824] (Range: 1-335)`	`335`	`VFDB`	`73-334`	`-5.490`	`9`	`VFG002313(gi:123443692) (pilQ) type IV pilus biogenesis protein PilQ [Type IV pili (VF0401)] [Yersinia enterocolitica subsp. enterocolitica 8081]`
20	`gi\|15895945\|ref\|NP_349294.1\| DNA helicase (CA_C2687) [Clostridium acetobutylicum ATCC 824] (Range: 1-714)`	`714`	`VFDB`	`10-567`	`-7.810`	`11`	`VFG001980(gi:121582664) (virD4) Type IV secretion system protein VirD4 [Type IV secretion system (VF0325)] [Campylobacter jejuni subsp. jejuni 81-176]`