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Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:

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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 3876next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 ACL93468.1 301 HGM_OVER 86-301 -2.600 PB021443 Q5LG43_BACFN/1-226 PB021443; Pfam-B_21443;
2 ACL93469.1 199 HGM_OVER 64-184 -4.840 HGC00789 gi|163310627|dbj|BABD01000073.1|7.0 TMP01036;
3 ACL93470.1 285 HGM_OVER 120-285 -3.920 PB007011 gi|160888195|ref|ZP_02069198.1| hypothetical protein BACUNI_00603 [Bacteroides uniformis ATCC 8492]gi|156862330|gb|EDO55761.1| hypothetical protein BACUNI_00603 [Bacteroides uniformis ATCC 8492]
4 ACL93471.1 199 HGM_OVER 133-192 -2.460 15  HGC00311 gi|163635536|dbj|BABG01000737.1|2.0 TMP00178;
5 ACL93472.1 237 HGM_OVER 19-149 -3.480 HGC00803 gi|163280588|dbj|BABD01030100.1|2.0 TMP01051;
6 ACL93473.1 262 HGM_OVER 24-143 -3.430 13  PB003645 Q65HI2_BACLD/1-230 PB003645; Pfam-B_3645;
7 ACL93474.1 96 HGM_OVER 14-83 -3.240 13  PB003142 Q8DVS6_STRMU/1-162 PB003142; Pfam-B_3142;
8 ACL93475.1 490 HGM_OVER 198-312 -3.200 10  PB040621 Q8A865_BACTN/1-132 PB040621; Pfam-B_40621;
9 ACL93476.1 206 HGM_OVER 110-206 -4.800 15  PB013946 A7ABR4_9PORP/121-442 PB013946; Pfam-B_13946;
10 ACL93477.1 631 HGM_OVER 115-490 -7.470 11  PB162065 _Gut.Meta.Jp.0089312_ gi|162832207|dbj|BABA01012502.1||1 (- 0:1326~0 complete)
11 ACL93478.1 385 HGM_OVER 148-226 -5.190 16  HGC00991 gi|163600283|dbj|BABF01000984.1|3.0 TMP01348;
12 ACL93479.1 903 HGM_OVER 528-741 -2.950 HGC00024 gi|162813637|dbj|BABA01031072.1|2.0 TMP01508;
13 ACL93480.1 940 HGM_OVER 492-704 -6.910 12  PB047024 _Gut.Meta.Jp.0098985_ gi|162869273|dbj|BABB01000734.1||6 (+ 5047:5650~0 complete)
14 ACL93481.1 158 HGM_OVER 1-148 -4.050 11  PB005346 A0R807_PELPD/1-258 PB005346; Pfam-B_5346;
15 ACL93482.1 183 HGM_OVER 57-148 -3.530 HGC00164 gi|163636082|dbj|BABG01000191.1|4.0 TMP00833;
16 ACL93483.1 150 HGM_OVER 27-132 -5.230 15  PB053359 gi|153891307|ref|ZP_02012332.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]gi|151582630|gb|EDN46158.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]
17 ACL93484.1 79 HGM_OVER 2-77 -3.330 10  PB033130 gi|160880323|ref|YP_001559291.1| transglutaminase domain protein [Clostridium phytofermentans ISDg]gi|160428989|gb|ABX42552.1| transglutaminase domain protein [Clostridium phytofermentans ISDg]
18 ACL93485.1 349 HGM_OVER 18-124 -2.880 11  PB001572 gi|163816107|ref|ZP_02207475.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]gi|158448527|gb|EDP25522.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]
19 ACL93486.1 210 HGM_OVER 110-209 -3.040 18  PB000821 Q82P27_STRAW/1-209 PB000821; Pfam-B_821;
20 ACL93487.1 74 HGM_OVER 35-69 -4.430 11  HGC00928 gi|162868028|dbj|BABB01001979.1|3.0 TMP01255;


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Rychlewski L, Zhang B, Godzik A. Functional insights from structural predictions: analysis of the Escherichia coli genome. Protein Sci. 1999 Mar;8(3):614-24.