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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 3877next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 ACL93468.1 301 PfamA32U 33-287 -91.300 32  PF03618.14; PSRP_LARHH/8-265; Kinase/pyrophosphorylase
2 ACL93469.1 199 PfamA32U 6-193 -83.400 26  PF02545.14; D7DNK7_METV0/10-194; Maf-like protein
3 ACL93470.1 285 PfamA32U 14-96 -41.600 29  PF08501.11; ARO1_EMENI/1294-1374; Shikimate dehydrogenase substrate binding domain
126-252 -18.100 26  PF01488.20; HEM1_PSEAE/169-304; Shikimate / quinate 5-dehydrogenase
4 ACL93471.1 199 PfamA32U 2-181 -82.200 26  PF01121.20; COAE_HAEIN/3-181; Dephospho-CoA kinase
5 ACL93472.1 237 PfamA32U 1-224 -27.200 18  PF13361.6; K9YCL2_HALP7/269-792; UvrD-like helicase C-terminal domain
5-164 -84.700 46  PF00929.24; DPO3E_ECOLI/9-175; Exonuclease
6 ACL93473.1 262 PfamA32U 13-254 -86.400 19  PF00378.20; PKSI_BACSU/10-249; Enoyl-CoA hydratase/isomerase
7 ACL93474.1 96 PfamA32U 7-88 -47.400 34  PF01649.18; D9T9K3_MICAI/2-84; Ribosomal protein S20
8 ACL93475.1 490 PfamA32U 24-87 -17.300 27  PF11638.8; DNAA_LAWIP/5-67; DnaA N-terminal domain
149-373 -91.300 37  PF00308.18; DNAA_STRCO/317-535; Bacterial dnaA protein
185-474 -9.560 13  PF03969.16; ZAPE_ECOLI/4-371; AFG1-like ATPase
399-467 -35.200 55  PF08299.11; D9QS97_ACEAZ/358-426; Bacterial dnaA protein helix-turn-helix
9 ACL93476.1 206 PfamA32U 11-201 -67.200 26  PF13532.6; D0N998_PHYIT/73-283; 2OG-Fe(II) oxygenase superfamily
10 ACL93477.1 631 PfamA32U 4-599 -162.000 65  PF00012.20; HSP7E_DROME/54-653; Hsp70 protein
11 ACL93478.1 385 PfamA32U 3-65 -38.600 54  PF00226.31; Q22028_CAEEL/17-79; DnaJ domain
26-205 -10.200 12  PF05458.12; SIVA_HUMAN/1-175; Cd27 binding protein (Siva)
121-342 -74.600 32  PF01556.18; T0NBZ6_9EURY/129-343; DnaJ C terminal domain
12 ACL93479.1 903 PfamA32U 19-136 -64.900 67  PF01624.20; MUTS_AGRFC/20-137; MutS domain I
144-272 -30.600 23  PF05188.17; MUTS_SYNY3/150-289; MutS domain II
288-593 -74.000 28  PF05192.18; R5BPR4_9FIRM/270-560; MutS domain III
651-838 -90.400 56  PF00488.21; MUTS_SALTY/612-799; MutS domain V
13 ACL93480.1 940 PfamA32U 4-198 -15.700 17  PF03710.15; GLNE_ECOLI/29-277; Glutamate-ammonia ligase adenylyltransferase
210-350 -62.200 37  PF08335.11; A1K6S3_AZOSB/170-310; GlnD PII-uridylyltransferase
494-634 -12.400 14  PF18019.1; E1VHP9_9GAMM/11-227; HD domain
848-919 -10.100 19  PF13740.6; D3RP38_ALLVD/3-79; ACT domain
14 ACL93481.1 158 PfamA32U 15-148 -80.900 51  PF01967.21; B0CRH2_LACBS/355-512; MoaC family
15 ACL93482.1 183 PfamA32U 24-166 -25.000 25  PF00994.24; CINAL_DESPS/4-169; Probable molybdopterin binding domain
16 ACL93483.1 150 PfamA32U 5-117 -55.200 28  PF02391.17; K3WEI0_PYTUL/34-147; MoaE protein
17 ACL93484.1 79 PfamA32U 2-79 -27.300 14  PF14451.6; Q63PX0_BURPS/1-81; Mut7-C ubiquitin
18 ACL93485.1 349 PfamA32U 36-197 -13.700 14  PF04055.21; CDKAL_HUMAN/208-381; Radical SAM superfamily
39-150 -19.700 15  PF13394.6; B8DWG8_BIFA0/78-188; 4Fe-4S single cluster domain
204-331 -45.700 38  PF06463.13; MOAA_PSESM/185-315; Molybdenum Cofactor Synthesis C
19 ACL93486.1 210 PfamA32U 9-206 -16.700 11  PF01983.16; COFC_ARCFU/1-205; Guanylyl transferase CofC like
11-175 -28.400 21  PF12804.7; Q5FTR9_GLUOX/6-165; MobA-like NTP transferase domain
20 ACL93487.1 74 PfamA32U 15-65 -7.150 15  PF06134.11; RHAA_BACHD/1-417; L-rhamnose isomerase (RhaA)


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Slabinski L, Wooley J, Deacon AM, Lesley SA, Wilson IA, Godzik A. Genome pool strategy for structural coverage of protein families. Structure. 2008 Nov 12;16(11):1659-67.