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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 3877next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 ACL93468.1 301 VFDB 25-296 -89.000 28  [S] COG1806 Uncharacterized protein conserved in bacteria
2 ACL93469.1 199 VFDB 3-198 -96.400 45  [D] COG0424 Nucleotide-binding protein implicated in inhibition of septum formation
3 ACL93470.1 285 VFDB 5-285 -92.900 34  [E] COG0169 Shikimate 5-dehydrogenase
4 ACL93471.1 199 VFDB 1-193 -88.300 38  [H] COG0237 Dephospho-CoA kinase
5 ACL93472.1 237 VFDB 2-227 -83.700 36  [L] COG0847 DNA polymerase III, epsilon subunit and related 3`-5` exonucleases
6 ACL93473.1 262 VFDB 13-262 -100.000 49  [I] KOG1680 Enoyl-CoA hydratase
7 ACL93474.1 96 VFDB 6-92 -51.100 33  [J] COG0268 Ribosomal protein S20
8 ACL93475.1 490 VFDB 22-490 -117.000 32  [L] COG0593 ATPase involved in DNA replication initiation
9 ACL93476.1 206 VFDB 6-206 -80.400 47  [L] COG3145 Alkylated DNA repair protein
10 ACL93477.1 631 VFDB 1-630 -161.000 59  [O] COG0443 Molecular chaperone
11 ACL93478.1 385 VFDB 2-380 -120.000 44  [O] COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain
12 ACL93479.1 903 VFDB 15-901 -209.000 34  [L] COG0249 Mismatch repair ATPase (MutS family)
13 ACL93480.1 940 VFDB 10-922 -209.000 27  [O] COG2844 UTP:GlnB (protein PII) uridylyltransferase
14 ACL93481.1 158 VFDB 1-156 -98.700 60  [H] COG0315 Molybdenum cofactor biosynthesis enzyme
15 ACL93482.1 183 VFDB 18-172 -58.700 21  [H] COG0521 Molybdopterin biosynthesis enzymes
16 ACL93483.1 150 VFDB 1-146 -76.600 44  [H] COG0314 Molybdopterin converting factor, large subunit
17 ACL93484.1 79 VFDB 1-79 -27.300 26  [H] COG1977 Molybdopterin converting factor, small subunit
18 ACL93485.1 349 VFDB 9-349 -115.000 66  [H] COG2896 Molybdenum cofactor biosynthesis enzyme
19 ACL93486.1 210 VFDB 1-209 -74.800 31  [R] COG2068 Uncharacterized MobA-related protein
20 ACL93487.1 74 VFDB 15-65 -6.800 21  [G] COG4806 L-rhamnose isomerase


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.