FFAS03 list of results C.trachomatis / VFDB

Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 968 next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|15604718|ref|NP_219502.1| hypothetical protein (CT875) [Chlamydia trachomatis D/UW-3/CX] 591 VFDB 60-586 -4.870 11 VFG000938(gi:26249460) (iucC) aerobactin siderophore biosynthesis protein IucC [Aerobactin (VF0229)] [Escherichia coli CFT073]
2 gi|15604719|ref|NP_219503.1| hypothetical protein (CT001) [Chlamydia trachomatis D/UW-3/CX] 90 VFDB 3-63 -7.110 15 VFG017059(gi:15604954) (incC) Inclusion Membrane Protein C [Type III secretion apparatus and effectors (CVF619)] [Chlamydia trachomatis D/UW-3/CX]
3 gi|15604720|ref|NP_219504.1| aspartyl/glutamyl-tRNA amidotransferase subunit C (CT002) [Chlamydia trachomatis D/UW-3/CX] 100 VFDB 5-59 -5.440 14 VFG000401(gi:16082739) (yscB) chaperone for YopN [TTSS (VF0140)] [Yersinia pestis CO92]
4 gi|15604721|ref|NP_219505.1| aspartyl/glutamyl-tRNA amidotransferase subunit A (CT003) [Chlamydia trachomatis D/UW-3/CX] 491 VFDB 160-470 -4.750 12 VFG001381(gi:57116734) (icl) Isocitrate lyase Icl (isocitrase) (isocitratase) [Isocitrate lyase (VF0253)] [Mycobacterium tuberculosis H37Rv]
5 gi|15604722|ref|NP_219506.1| aspartyl/glutamyl-tRNA amidotransferase subunit B (CT004) [Chlamydia trachomatis D/UW-3/CX] 488 VFDB 391-486 -5.530 13 VFG045566(gi:52842569) (lpg2359) Dot/Icm type IV secretion system effector [Dot/Icm (VF0156)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]
6 gi|15604723|ref|NP_219507.1| hypothetical protein (CT005) [Chlamydia trachomatis D/UW-3/CX] 363 VFDB 31-169 -7.330 18 VFG000506(gi:16764755) (sseG) type III secretion system effector SseG [TTSS(SPI-2 encode) (VF0321)] [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
7 gi|15604724|ref|NP_219508.1| hypothetical protein (CT006) [Chlamydia trachomatis D/UW-3/CX] 189 VFDB 21-189 -6.280 10 VFG001850(gi:52842892) (dotA) Dot/Icm type IV secretion system protein DotA [Dot/Icm (VF0156)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]
8 gi|15604725|ref|NP_219509.1| hypothetical protein (CT007) [Chlamydia trachomatis D/UW-3/CX] 316 VFDB 1-316 -24.100 9 VFG000240(gi:15676939) (opc) class 5 outer membrane protein [Opc (VF0077)] [Neisseria meningitidis MC58]
9 gi|15604726|ref|NP_219510.1| ribonuclease HIII (CT008) [Chlamydia trachomatis D/UW-3/CX] 300 VFDB 88-282 -5.030 12 VFG002382(gi:15611006) (eccCa1) ESX-1 type VII secretion system FtsK/SpoIIIE family protein EccCa1 [ESX-1 (VF0315)] [Mycobacterium tuberculosis H37Rv]
10 gi|15604727|ref|NP_219511.1| HTH transcriptional regulator (CT009) [Chlamydia trachomatis D/UW-3/CX] 143 VFDB 12-77 -9.360 16 VFG045470(gi:21693300) (cylR2) cytolysin regulator R2 [Cytolysin (VF0356)] [Enterococcus faecalis str. MMH594]
11 gi|15604728|ref|NP_219512.1| lipid A biosynthesis lauroyl acyltransferase (CT010) [Chlamydia trachomatis D/UW-3/CX] 455 VFDB 11-324 -79.700 19 VFG002025(gi:15792459) (htrB) lipid A biosynthesis lauroyl acyltransferase [LOS (VF0326)] [Campylobacter jejuni subsp. jejuni NCTC 11168]
12 gi|15604729|ref|NP_219513.1| hypothetical protein (CT011) [Chlamydia trachomatis D/UW-3/CX] 418 VFDB 1-191 -5.540 6 VFG000183(gi:15598300) (xcpP) secretion protein XcpP [xcp secretion system (VF0084)] [Pseudomonas aeruginosa PAO1]
13 gi|15604730|ref|NP_219514.1| hypothetical protein (CT012) [Chlamydia trachomatis D/UW-3/CX] 264 VFDB 122-225 -5.020 15 VFG001397(gi:15609168) (hspX) Heat shock protein HspX (alpha-crystallin homolog) (14 kDa antigen) (HSP16.3) [HspX (VF0301)] [Mycobacterium tuberculosis H37Rv]
14 gi|15604731|ref|NP_219515.1| cytochrome d ubiquinol oxidase subunit I (CT013) [Chlamydia trachomatis D/UW-3/CX] 446 VFDB 35-181 -4.960 15 VFG001357(gi:15901997) (cbpA) choline binding protein A [CbpA/PspC (VF0150)] [Streptococcus pneumoniae TIGR4]
15 gi|15604732|ref|NP_219516.1| cytochrome d ubiquinol oxidase subunit II (CT014) [Chlamydia trachomatis D/UW-3/CX] 353 VFDB 12-340 -5.490 13 VFG032992(gi:16803331) (oatA) peptidoglycan O-acetyltransferase [OatA (VF0441)] [Listeria monocytogenes EGD-e]
16 gi|15604733|ref|NP_219517.1| ATPase (CT015) [Chlamydia trachomatis D/UW-3/CX] 434 VFDB 241-434 -8.710 13 VFG000109(gi:15641469) (zot) zona occludens toxin [Zot (VF0129)] [Vibrio cholerae O1 biovar El Tor str. N16961]
17 gi|15604734|ref|NP_219518.1| hypothetical protein (CT016) [Chlamydia trachomatis D/UW-3/CX] 242 VFDB 141-240 -6.910 12 VFG041030(gi:15597041) (tse1) type VI secretion system effector Tse1, peptidoglycanhydrolase [HSI-1 (Hcp-secretion island 1) (SS178)] [Pseudomonas aeruginosa PAO1]
18 gi|15604735|ref|NP_219519.1| hypothetical protein (CT017) [Chlamydia trachomatis D/UW-3/CX] 433 VFDB 4-156 -13.800 15 VFG002159(gi:16803116) (aut) autolysin [Auto (VF0348)] [Listeria monocytogenes EGD-e]
9-306 -11.600 13 VFG000078(gi:16804596) (ami) autolysin amidase, adhesin [Ami (VF0071)] [Listeria monocytogenes EGD-e]
19 gi|15604736|ref|NP_219520.1| hypothetical protein (CT018) [Chlamydia trachomatis D/UW-3/CX] 157 VFDB 24-121 -5.470 15 VFG034880(gi:15804911) (espX6) Type III secretion system effector EspX6 [LEE encoded T3SS (SS020)] [Escherichia coli O157:H7 str. EDL933]
20 gi|15604737|ref|NP_219521.1| isoleucyl-tRNA synthetase (CT019) [Chlamydia trachomatis D/UW-3/CX] (Range: 1-500) 500 VFDB 1-493 -4.490 12 VFG002033(gi:13507880) (p1/MgPa/gapA) ADP1_MYCPN adhesin P1 [Cytadherence organelle (VF0330)] [Mycoplasma pneumoniae M129]

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

Comments and questions to: webmaster

#	Query	Length	Result vs.	Range	Score	%id	Covered by template(s)
1	`gi\|15604718\|ref\|NP_219502.1\| hypothetical protein (CT875) [Chlamydia trachomatis D/UW-3/CX]`	`591`	`VFDB`	`60-586`	`-4.870`	`11`	`VFG000938(gi:26249460) (iucC) aerobactin siderophore biosynthesis protein IucC [Aerobactin (VF0229)] [Escherichia coli CFT073]`
2	`gi\|15604719\|ref\|NP_219503.1\| hypothetical protein (CT001) [Chlamydia trachomatis D/UW-3/CX]`	`90`	`VFDB`	`3-63`	`-7.110`	`15`	`VFG017059(gi:15604954) (incC) Inclusion Membrane Protein C [Type III secretion apparatus and effectors (CVF619)] [Chlamydia trachomatis D/UW-3/CX]`
3	`gi\|15604720\|ref\|NP_219504.1\| aspartyl/glutamyl-tRNA amidotransferase subunit C (CT002) [Chlamydia trachomatis D/UW-3/CX]`	`100`	`VFDB`	`5-59`	`-5.440`	`14`	`VFG000401(gi:16082739) (yscB) chaperone for YopN [TTSS (VF0140)] [Yersinia pestis CO92]`
4	`gi\|15604721\|ref\|NP_219505.1\| aspartyl/glutamyl-tRNA amidotransferase subunit A (CT003) [Chlamydia trachomatis D/UW-3/CX]`	`491`	`VFDB`	`160-470`	`-4.750`	`12`	`VFG001381(gi:57116734) (icl) Isocitrate lyase Icl (isocitrase) (isocitratase) [Isocitrate lyase (VF0253)] [Mycobacterium tuberculosis H37Rv]`
5	`gi\|15604722\|ref\|NP_219506.1\| aspartyl/glutamyl-tRNA amidotransferase subunit B (CT004) [Chlamydia trachomatis D/UW-3/CX]`	`488`	`VFDB`	`391-486`	`-5.530`	`13`	`VFG045566(gi:52842569) (lpg2359) Dot/Icm type IV secretion system effector [Dot/Icm (VF0156)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]`
6	`gi\|15604723\|ref\|NP_219507.1\| hypothetical protein (CT005) [Chlamydia trachomatis D/UW-3/CX]`	`363`	`VFDB`	`31-169`	`-7.330`	`18`	`VFG000506(gi:16764755) (sseG) type III secretion system effector SseG [TTSS(SPI-2 encode) (VF0321)] [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`
7	`gi\|15604724\|ref\|NP_219508.1\| hypothetical protein (CT006) [Chlamydia trachomatis D/UW-3/CX]`	`189`	`VFDB`	`21-189`	`-6.280`	`10`	`VFG001850(gi:52842892) (dotA) Dot/Icm type IV secretion system protein DotA [Dot/Icm (VF0156)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]`
8	`gi\|15604725\|ref\|NP_219509.1\| hypothetical protein (CT007) [Chlamydia trachomatis D/UW-3/CX]`	`316`	`VFDB`	`1-316`	`-24.100`	`9`	`VFG000240(gi:15676939) (opc) class 5 outer membrane protein [Opc (VF0077)] [Neisseria meningitidis MC58]`
9	`gi\|15604726\|ref\|NP_219510.1\| ribonuclease HIII (CT008) [Chlamydia trachomatis D/UW-3/CX]`	`300`	`VFDB`	`88-282`	`-5.030`	`12`	`VFG002382(gi:15611006) (eccCa1) ESX-1 type VII secretion system FtsK/SpoIIIE family protein EccCa1 [ESX-1 (VF0315)] [Mycobacterium tuberculosis H37Rv]`
10	`gi\|15604727\|ref\|NP_219511.1\| HTH transcriptional regulator (CT009) [Chlamydia trachomatis D/UW-3/CX]`	`143`	`VFDB`	`12-77`	`-9.360`	`16`	`VFG045470(gi:21693300) (cylR2) cytolysin regulator R2 [Cytolysin (VF0356)] [Enterococcus faecalis str. MMH594]`
11	`gi\|15604728\|ref\|NP_219512.1\| lipid A biosynthesis lauroyl acyltransferase (CT010) [Chlamydia trachomatis D/UW-3/CX]`	`455`	`VFDB`	`11-324`	`-79.700`	`19`	`VFG002025(gi:15792459) (htrB) lipid A biosynthesis lauroyl acyltransferase [LOS (VF0326)] [Campylobacter jejuni subsp. jejuni NCTC 11168]`
12	`gi\|15604729\|ref\|NP_219513.1\| hypothetical protein (CT011) [Chlamydia trachomatis D/UW-3/CX]`	`418`	`VFDB`	`1-191`	`-5.540`	`6`	`VFG000183(gi:15598300) (xcpP) secretion protein XcpP [xcp secretion system (VF0084)] [Pseudomonas aeruginosa PAO1]`
13	`gi\|15604730\|ref\|NP_219514.1\| hypothetical protein (CT012) [Chlamydia trachomatis D/UW-3/CX]`	`264`	`VFDB`	`122-225`	`-5.020`	`15`	`VFG001397(gi:15609168) (hspX) Heat shock protein HspX (alpha-crystallin homolog) (14 kDa antigen) (HSP16.3) [HspX (VF0301)] [Mycobacterium tuberculosis H37Rv]`
14	`gi\|15604731\|ref\|NP_219515.1\| cytochrome d ubiquinol oxidase subunit I (CT013) [Chlamydia trachomatis D/UW-3/CX]`	`446`	`VFDB`	`35-181`	`-4.960`	`15`	`VFG001357(gi:15901997) (cbpA) choline binding protein A [CbpA/PspC (VF0150)] [Streptococcus pneumoniae TIGR4]`
15	`gi\|15604732\|ref\|NP_219516.1\| cytochrome d ubiquinol oxidase subunit II (CT014) [Chlamydia trachomatis D/UW-3/CX]`	`353`	`VFDB`	`12-340`	`-5.490`	`13`	`VFG032992(gi:16803331) (oatA) peptidoglycan O-acetyltransferase [OatA (VF0441)] [Listeria monocytogenes EGD-e]`
16	`gi\|15604733\|ref\|NP_219517.1\| ATPase (CT015) [Chlamydia trachomatis D/UW-3/CX]`	`434`	`VFDB`	`241-434`	`-8.710`	`13`	`VFG000109(gi:15641469) (zot) zona occludens toxin [Zot (VF0129)] [Vibrio cholerae O1 biovar El Tor str. N16961]`
17	`gi\|15604734\|ref\|NP_219518.1\| hypothetical protein (CT016) [Chlamydia trachomatis D/UW-3/CX]`	`242`	`VFDB`	`141-240`	`-6.910`	`12`	`VFG041030(gi:15597041) (tse1) type VI secretion system effector Tse1, peptidoglycanhydrolase [HSI-1 (Hcp-secretion island 1) (SS178)] [Pseudomonas aeruginosa PAO1]`
18	`gi\|15604735\|ref\|NP_219519.1\| hypothetical protein (CT017) [Chlamydia trachomatis D/UW-3/CX]`	`433`	`VFDB`	`4-156`	`-13.800`	`15`	`VFG002159(gi:16803116) (aut) autolysin [Auto (VF0348)] [Listeria monocytogenes EGD-e]`
				`9-306`	`-11.600`	`13`	`VFG000078(gi:16804596) (ami) autolysin amidase, adhesin [Ami (VF0071)] [Listeria monocytogenes EGD-e]`
19	`gi\|15604736\|ref\|NP_219520.1\| hypothetical protein (CT018) [Chlamydia trachomatis D/UW-3/CX]`	`157`	`VFDB`	`24-121`	`-5.470`	`15`	`VFG034880(gi:15804911) (espX6) Type III secretion system effector EspX6 [LEE encoded T3SS (SS020)] [Escherichia coli O157:H7 str. EDL933]`
20	`gi\|15604737\|ref\|NP_219521.1\| isoleucyl-tRNA synthetase (CT019) [Chlamydia trachomatis D/UW-3/CX] (Range: 1-500)`	`500`	`VFDB`	`1-493`	`-4.490`	`12`	`VFG002033(gi:13507880) (p1/MgPa/gapA) ADP1_MYCPN adhesin P1 [Cytadherence organelle (VF0330)] [Mycoplasma pneumoniae M129]`