FFAS03 list of results COG0516 / HGM

Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 8581 next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 [H] COG0001 Glutamate-1-semialdehyde aminotransferase 411 HGM_OVER 259-405 -3.560 11 PB007843 JCVI_PEP_1096682172521 /source_dna_id=JCVI_ORF_1096682172520 /offset=0 /translation_table=11 /length=152 /full_length=152
2 [E] COG0002 Acetylglutamate semialdehyde dehydrogenase 336 HGM_OVER 18-307 -2.860 11 PB076697 gi|160881556|ref|YP_001560524.1| hypothetical protein Cphy_3432 [Clostridium phytofermentans ISDg]gi|160430222|gb|ABX43785.1| conserved hypothetical protein [Clostridium phytofermentans ISDg]
3 [P] COG0003 Oxyanion-translocating ATPase 396 HGM_OVER 14-286 -4.650 8 PB022506 Q11RP6_CYTH3/1-298 PB022506; Pfam-B_22506;
4 [P] COG0004 Ammonia permease 470 HGM_OVER 310-437 -3.310 14 PB032242 Q8FLW6_COREF/1-257 PB032242; Pfam-B_32242;
5 [F] COG0005 Purine nucleoside phosphorylase 271 HGM_OVER 43-160 -4.060 13 HGC00789 gi|163310627|dbj|BABD01000073.1|7.0 TMP01036;
6 [E] COG0006 Xaa-Pro aminopeptidase 356 HGM_OVER 117-304 -3.150 10 HGC00166 gi|163579340|dbj|BABE01005762.1|1.0 TMP00473;
7 [H] COG0007 Uroporphyrinogen-III methylase 292 HGM_OVER 44-167 -3.900 12 HGC00044 gi|162658718|dbj|BAAX01000887.1|1.0 TMP00920;
8 [J] COG0008 Glutamyl- and glutaminyl-tRNA synthetases 554 HGM_OVER 109-204 -4.280 16 PB027498 Q7MTK6_PORGI/1-146 PB027498; Pfam-B_27498;
9 [J] COG0009 Putative translation factor (SUA5) 346 HGM_OVER 1-200 -3.180 12 PB000119 Q6KIT1_MYCMO/1-381 PB000119; Pfam-B_119;
10 [E] COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family 306 HGM_OVER 89-243 -3.500 12 HGC00164 gi|163636082|dbj|BABG01000191.1|4.0 TMP00833;
11 [S] COG0011 Uncharacterized conserved protein 94 HGM_OVER 21-80 -4.140 20 PB009661 _Gut.Meta.Jp.0000785_ gi|162567239|dbj|BAAU01000237.1||2 (- 3549:4008~0 complete)
12 [J] COG0012 Predicted GTPase, probable translation factor 397 HGM_OVER 165-397 -3.250 5 PB005346 A0R807_PELPD/1-258 PB005346; Pfam-B_5346;
13 [J] COG0013 Alanyl-tRNA synthetase 872 HGM_OVER 322-434 -5.070 10 PB011130 gi|88806557|ref|ZP_01122074.1| hypothetical protein RB2501_00756 [Robiginitalea biformata HTCC2501]gi|88783389|gb|EAR14561.1| hypothetical protein RB2501_00756 [Robiginitalea biformata HTCC2501]
14 [E] COG0014 Gamma-glutamyl phosphate reductase 417 HGM_OVER 173-364 -3.460 7 PB012386 gi|82541244|ref|XP_724876.1| blood-stage membrane protein Ag-1 [Plasmodium yoelii yoelii str. 17XNL]gi|23479680|gb|EAA16441.1| blood-stage membrane protein Ag-1 [Plasmodium yoelii yoelii]
15 [F] COG0015 Adenylosuccinate lyase 431 HGM_OVER 175-294 -2.740 14 PB038401 Q8RFH0_FUSNN/1-210 PB038401; Pfam-B_38401;
16 [J] COG0016 Phenylalanyl-tRNA synthetase alpha subunit 344 HGM_OVER 1-145 -2.870 13 PB044822 Q89ZL7_BACTN/1-147 PB044822; Pfam-B_44822;
17 [J] COG0017 Aspartyl/asparaginyl-tRNA synthetases 430 HGM_OVER 221-335 -3.290 12 HGC00993 gi|163626727|dbj|BABG01009540.1|1.0 TMP01352;
18 [J] COG0018 Arginyl-tRNA synthetase 556 HGM_OVER 368-478 -3.330 18 PB004996 Q5NNS6_ZYMMO/1-150 PB004996; Pfam-B_4996;
19 [E] COG0019 Diaminopimelate decarboxylase 436 HGM_OVER 328-428 -3.580 11 PB035451 Q3Z7G7_DEHE1/1-135 PB035451; Pfam-B_35451;
20 [I] COG0020 Undecaprenyl pyrophosphate synthase 248 HGM_OVER 68-212 -4.590 13 PB028090 gi|167758043|ref|ZP_02430170.1| hypothetical protein CLOSCI_00381 [Clostridium scindens ATCC 35704]gi|167663940|gb|EDS08070.1| hypothetical protein CLOSCI_00381 [Clostridium scindens ATCC 35704]

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

Comments and questions to: webmaster

#	Query	Length	Result vs.	Range	Score	%id	Covered by template(s)
1	`[H] COG0001 Glutamate-1-semialdehyde aminotransferase`	`411`	`HGM_OVER`	`259-405`	`-3.560`	`11`	`PB007843 JCVI_PEP_1096682172521 /source_dna_id=JCVI_ORF_1096682172520 /offset=0 /translation_table=11 /length=152 /full_length=152`
2	`[E] COG0002 Acetylglutamate semialdehyde dehydrogenase`	`336`	`HGM_OVER`	`18-307`	`-2.860`	`11`	`PB076697 gi\|160881556\|ref\|YP_001560524.1\| hypothetical protein Cphy_3432 [Clostridium phytofermentans ISDg]gi\|160430222\|gb\|ABX43785.1\| conserved hypothetical protein [Clostridium phytofermentans ISDg]`
3	`[P] COG0003 Oxyanion-translocating ATPase`	`396`	`HGM_OVER`	`14-286`	`-4.650`	`8`	`PB022506 Q11RP6_CYTH3/1-298 PB022506; Pfam-B_22506;`
4	`[P] COG0004 Ammonia permease`	`470`	`HGM_OVER`	`310-437`	`-3.310`	`14`	`PB032242 Q8FLW6_COREF/1-257 PB032242; Pfam-B_32242;`
5	`[F] COG0005 Purine nucleoside phosphorylase`	`271`	`HGM_OVER`	`43-160`	`-4.060`	`13`	`HGC00789 gi\|163310627\|dbj\|BABD01000073.1\|7.0 TMP01036;`
6	`[E] COG0006 Xaa-Pro aminopeptidase`	`356`	`HGM_OVER`	`117-304`	`-3.150`	`10`	`HGC00166 gi\|163579340\|dbj\|BABE01005762.1\|1.0 TMP00473;`
7	`[H] COG0007 Uroporphyrinogen-III methylase`	`292`	`HGM_OVER`	`44-167`	`-3.900`	`12`	`HGC00044 gi\|162658718\|dbj\|BAAX01000887.1\|1.0 TMP00920;`
8	`[J] COG0008 Glutamyl- and glutaminyl-tRNA synthetases`	`554`	`HGM_OVER`	`109-204`	`-4.280`	`16`	`PB027498 Q7MTK6_PORGI/1-146 PB027498; Pfam-B_27498;`
9	`[J] COG0009 Putative translation factor (SUA5)`	`346`	`HGM_OVER`	`1-200`	`-3.180`	`12`	`PB000119 Q6KIT1_MYCMO/1-381 PB000119; Pfam-B_119;`
10	`[E] COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family`	`306`	`HGM_OVER`	`89-243`	`-3.500`	`12`	`HGC00164 gi\|163636082\|dbj\|BABG01000191.1\|4.0 TMP00833;`
11	`[S] COG0011 Uncharacterized conserved protein`	`94`	`HGM_OVER`	`21-80`	`-4.140`	`20`	`PB009661 _Gut.Meta.Jp.0000785_ gi\|162567239\|dbj\|BAAU01000237.1\|\|2 (- 3549:4008~0 complete)`
12	`[J] COG0012 Predicted GTPase, probable translation factor`	`397`	`HGM_OVER`	`165-397`	`-3.250`	`5`	`PB005346 A0R807_PELPD/1-258 PB005346; Pfam-B_5346;`
13	`[J] COG0013 Alanyl-tRNA synthetase`	`872`	`HGM_OVER`	`322-434`	`-5.070`	`10`	`PB011130 gi\|88806557\|ref\|ZP_01122074.1\| hypothetical protein RB2501_00756 [Robiginitalea biformata HTCC2501]gi\|88783389\|gb\|EAR14561.1\| hypothetical protein RB2501_00756 [Robiginitalea biformata HTCC2501]`
14	`[E] COG0014 Gamma-glutamyl phosphate reductase`	`417`	`HGM_OVER`	`173-364`	`-3.460`	`7`	`PB012386 gi\|82541244\|ref\|XP_724876.1\| blood-stage membrane protein Ag-1 [Plasmodium yoelii yoelii str. 17XNL]gi\|23479680\|gb\|EAA16441.1\| blood-stage membrane protein Ag-1 [Plasmodium yoelii yoelii]`
15	`[F] COG0015 Adenylosuccinate lyase`	`431`	`HGM_OVER`	`175-294`	`-2.740`	`14`	`PB038401 Q8RFH0_FUSNN/1-210 PB038401; Pfam-B_38401;`
16	`[J] COG0016 Phenylalanyl-tRNA synthetase alpha subunit`	`344`	`HGM_OVER`	`1-145`	`-2.870`	`13`	`PB044822 Q89ZL7_BACTN/1-147 PB044822; Pfam-B_44822;`
17	`[J] COG0017 Aspartyl/asparaginyl-tRNA synthetases`	`430`	`HGM_OVER`	`221-335`	`-3.290`	`12`	`HGC00993 gi\|163626727\|dbj\|BABG01009540.1\|1.0 TMP01352;`
18	`[J] COG0018 Arginyl-tRNA synthetase`	`556`	`HGM_OVER`	`368-478`	`-3.330`	`18`	`PB004996 Q5NNS6_ZYMMO/1-150 PB004996; Pfam-B_4996;`
19	`[E] COG0019 Diaminopimelate decarboxylase`	`436`	`HGM_OVER`	`328-428`	`-3.580`	`11`	`PB035451 Q3Z7G7_DEHE1/1-135 PB035451; Pfam-B_35451;`
20	`[I] COG0020 Undecaprenyl pyrophosphate synthase`	`248`	`HGM_OVER`	`68-212`	`-4.590`	`13`	`PB028090 gi\|167758043\|ref\|ZP_02430170.1\| hypothetical protein CLOSCI_00381 [Clostridium scindens ATCC 35704]gi\|167663940\|gb\|EDS08070.1\| hypothetical protein CLOSCI_00381 [Clostridium scindens ATCC 35704]`