current user: public

Please be advised that we have recently moved our server to a new location. We tried our best to fully test all functions on the website, but if something does not work for you please let us know.

Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:

Page size:   Sort by score   Show only entries containing string:

Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 21-40 of 8581< prev pagenext page >

# Query Length Result vs. Range Score %id Covered by template(s)
21 [G] COG0021 Transketolase 659 PDB0516 2-659 -221.000 63  4xeu_A mol:protein length:673 Transketolase
22 [C] COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 335 PDB0516 6-334 -121.000 56  1ni4_B mol:protein length:341 Pyruvate dehydrogenase E1 component: Beta sub
23 [J] COG0023 Translation initiation factor 1 (eIF-1/SUI1) and related proteins 108 PDB0516 1-108 -66.100 89  1d1r_A mol:protein length:116 HYPOTHETICAL 11.4 KD PROTEIN YCIH IN PYRF-OSM
24 [J] COG0024 Methionine aminopeptidase 275 PDB0516 17-272 -121.000 42  1o0x_A mol:protein length:262 Methionine aminopeptidase
25 [P] COG0025 NhaP-type Na+/H+ and K+/H+ antiporters 549 PDB0516 7-426 -36.800 18  4cz8_A mol:protein length:422 NA+/H+ ANTIPORTER, PUTATIVE
420-548 -11.900 13  4yto_A mol:protein length:148 Synaptonemal complex protein 1
26 [F] COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) 363 PDB0516 1-363 -130.000 41  3q2o_A mol:protein length:389 Phosphoribosylaminoimidazole carboxylase, ATP
27 [F] COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) 393 PDB0516 1-392 -133.000 64  1eyz_A mol:protein length:392 PHOSPHORIBOSYLGLYCINAMIDE FORMYLTRANSFERASE 2
28 [EH] COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 583 PDB0516 24-578 -140.000 33  4rji_A mol:protein length:587 Acetolactate synthase
29 [H] COG0029 Aspartate oxidase 536 PDB0516 7-523 -151.000 41  1chu_A mol:protein length:540 PROTEIN (L-ASPARTATE OXIDASE)
30 [J] COG0030 Dimethyladenosine transferase (rRNA methylation) 307 PDB0516 25-307 -114.000 62  1zq9_A mol:protein length:285 Probable dimethyladenosine transferase
31 [E] COG0031 Cysteine synthase 324 PDB0516 1-324 -119.000 70  5J43 Entity 1(prereleased)
32 [G] COG0033 Phosphoglucomutase 542 PDB0516 1-542 -165.000 56  5epc_A mol:protein length:585 Phosphoglucomutase-1
33 [F] COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase 499 PDB0516 34-492 -131.000 46  1gph_1 mol:protein length:465 GLUTAMINE PHOSPHORIBOSYL-PYROPHOSPHATE AMIDOT
34 [F] COG0035 Uracil phosphoribosyltransferase 209 PDB0516 1-209 -121.000 70  1i5e_A mol:protein length:209 URACIL PHOSPHORIBOSYLTRANSFERASE
35 [G] COG0036 Pentose-5-phosphate-3-epimerase 225 PDB0516 1-222 -110.000 64  3inp_A mol:protein length:246 D-ribulose-phosphate 3-epimerase
36 [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 472 PDB0516 1-467 -124.000 47  3a2k_A mol:protein length:464 tRNA(Ile)-lysidine synthase
37 [P] COG0038 Chloride channel protein EriC 451 PDB0516 1-451 -110.000 100  3nd0_A mol:protein length:466 Sll0855 protein
38 [C] COG0039 Malate/lactate dehydrogenases 317 PDB0516 1-317 -119.000 99  3d0o_A mol:protein length:317 L-lactate dehydrogenase 1
39 [E] COG0040 ATP phosphoribosyltransferase 213 PDB0516 1-213 -114.000 100  2vd2_A mol:protein length:214 ATP PHOSPHORIBOSYLTRANSFERASE
40 [F] COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 162 PDB0516 1-161 -88.600 78  1xmp_A mol:protein length:170 phosphoribosylaminoimidazole carboxylase


FFAS is supported by the NIH grant R01-GM087218-01
1 2 4 1 8 9   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Sasin JM, Godzik A, Bujnicki JM. SURF'S UP! - protein classification by surface comparisons. J Biosci. 2007 Jan;32(1):97-100.