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Shows best template from each database, and all templates with significant scores covering different query fragments

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# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|16127995|ref|NP_414542.1| thr operon leader peptide (thrL b0001 exp) [Escherichia coli str. K-12 substr. MG1655] 21 NEW_HUMAN_DOMAINS 1-21 -3.040 19  sp|Q86SK9|SCD5_HUMAN Stearoyl-CoA desaturase 5 OS=Homo sapiens GN=SCD5 PE=2 SV=2 (Range: 280-330)
2 gi|16127996|ref|NP_414543.1| fused aspartokinase I and homoserine dehydrogenase I (thrA b0002 exp) [Escherichia coli str. K-12 substr. MG1655] 820 NEW_HUMAN_DOMAINS 226-272 -5.700 15  tr|C9J120|C9J120_HUMAN Uncharacterized protein OS=Homo sapiens GN=ZNF445 PE=4 SV=1 (Range: 127-225)
3 gi|16127997|ref|NP_414544.1| homoserine kinase (thrB b0003 exp) [Escherichia coli str. K-12 substr. MG1655] 310 NEW_HUMAN_DOMAINS 180-263 -5.700 13  tr|E9PFE0|E9PFE0_HUMAN Uncharacterized protein OS=Homo sapiens GN=CIITA PE=4 SV=1 (Range: 286-365)
4 gi|16127998|ref|NP_414545.1| threonine synthase (thrC b0004 exp) [Escherichia coli str. K-12 substr. MG1655] 428 NEW_HUMAN_DOMAINS 130-158 -3.800 20  tr|F8WDD8|F8WDD8_HUMAN Uncharacterized protein OS=Homo sapiens GN=C3orf65 PE=4 SV=1 (Range: 1-114)
5 gi|16127999|ref|NP_414546.1|(removed signal:1-23) predicted protein (yaaX b0005 exp) [Escherichia coli str. K-12 substr. MG1655] 75 NEW_HUMAN_DOMAINS 17-32 -8.100 37  sp|Q14517|FAT1_HUMAN Protocadherin Fat 1 OS=Homo sapiens GN=FAT1 PE=1 SV=2 (Range: 4376-4456)
6 gi|16128000|ref|NP_414547.1| conserved protein, UPF0246 family (yaaA b0006 exp) [Escherichia coli str. K-12 substr. MG1655] 258 NEW_HUMAN_DOMAINS 33-258 -5.760 13  sp|O15259|NPHP1_HUMAN Nephrocystin-1 OS=Homo sapiens GN=NPHP1 PE=1 SV=1 (Range: 548-732)
7 gi|16128001|ref|NP_414548.1| predicted transporter (yaaJ b0007 exp) [Escherichia coli str. K-12 substr. MG1655] 476 NEW_HUMAN_DOMAINS 43-131 -5.620 tr|F8WAF8|F8WAF8_HUMAN Uncharacterized protein OS=Homo sapiens GN=ZNF140 PE=4 SV=1 (Range: 1-77)
8 gi|16128002|ref|NP_414549.1| transaldolase B (talB b0008 exp) [Escherichia coli str. K-12 substr. MG1655] 317 NEW_HUMAN_DOMAINS 122-159 -4.820 18  sp|Q9NQT8|KI13B_HUMAN Kinesin-like protein KIF13B OS=Homo sapiens GN=KIF13B PE=1 SV=1 (Range: 1130-1205)
9 gi|16128003|ref|NP_414550.1| molybdochelatase incorporating molybdenum into molybdopterin (mog b0009 exp) [Escherichia coli str. K-12 substr. MG1655] 195 NEW_HUMAN_DOMAINS 5-94 -6.260 11  sp|Q9NX45|SOLH2_HUMAN Spermatogenesis- and oogenesis-specific basic helix-loop-helix-containing protein 2 OS=Homo sapiens GN=SOHLH2 PE=2 SV=2 (Range: 1-196)
10 gi|16128004|ref|NP_414551.1| inner membrane protein, Grp1_Fun34_YaaH family (yaaH b0010 exp) [Escherichia coli str. K-12 substr. MG1655] 188 NEW_HUMAN_DOMAINS 47-75 -6.970 17  sp|Q7Z404|TMC4_HUMAN Transmembrane channel-like protein 4 OS=Homo sapiens GN=TMC4 PE=2 SV=3 (Range: 193-247)
11 gi|16128005|ref|NP_414552.1| conserved protein, UPF0174 family (yaaW b0011 exp) [Escherichia coli str. K-12 substr. MG1655] 237 NEW_HUMAN_DOMAINS 14-122 -5.360 11  sp|Q9ULG6|CCPG1_HUMAN Cell cycle progression protein 1 OS=Homo sapiens GN=CCPG1 PE=1 SV=3 (Range: 629-736)
12 gi|16128007|ref|NP_414554.1|(removed signal:1-23) conserved protein, UPF0412 family (yaaI b0013 exp) [Escherichia coli str. K-12 substr. MG1655] 111 NEW_HUMAN_DOMAINS 1-111 -6.540 sp|Q8N5W9|F101B_HUMAN Protein FAM101B OS=Homo sapiens GN=FAM101B PE=1 SV=1 (Range: 80-214)
13 gi|16128008|ref|NP_414555.1| chaperone Hsp70, co-chaperone with DnaJ (dnaK b0014 exp) [Escherichia coli str. K-12 substr. MG1655] 638 NEW_HUMAN_DOMAINS 382-502 -8.820 17  sp|O43301|HS12A_HUMAN Heat shock 70 kDa protein 12A OS=Homo sapiens GN=HSPA12A PE=1 SV=2 (Range: 520-675)
14 gi|16128009|ref|NP_414556.1| chaperone Hsp40, co-chaperone with DnaK (dnaJ b0015 exp) [Escherichia coli str. K-12 substr. MG1655] 376 NEW_HUMAN_DOMAINS 108-200 -6.740 20  sp|Q5T197|DCST1_HUMAN DC-STAMP domain-containing protein 1 OS=Homo sapiens GN=DCST1 PE=2 SV=1 (Range: 596-684)
15 gi|16128010|ref|NP_414557.1| IS186 transposase (insL b0016 exp) [Escherichia coli str. K-12 substr. MG1655] 370 NEW_HUMAN_DOMAINS 286-353 -6.780 16  tr|B7Z676|B7Z676_HUMAN Uncharacterized protein OS=Homo sapiens GN=SLC9B2 PE=2 SV=1 (Range: 307-417)
16 gi|16128012|ref|NP_414559.1| regulatory protein for HokC, overlaps CDS of hokC (mokC b0018 exp) [Escherichia coli str. K-12 substr. MG1655] 69 NEW_HUMAN_DOMAINS 3-69 -5.500 sp|O43301|HS12A_HUMAN Heat shock 70 kDa protein 12A OS=Homo sapiens GN=HSPA12A PE=1 SV=2 (Range: 520-675)
17 gi|49175991|ref|YP_025292.1| toxic membrane protein, small (hokC b4412 exp) [Escherichia coli str. K-12 substr. MG1655] 50 NEW_HUMAN_DOMAINS 24-50 -4.610 14  sp|Q6AI39|K0240_HUMAN Uncharacterized protein KIAA0240 OS=Homo sapiens GN=KIAA0240 PE=2 SV=2 (Range: 83-132)
18 gi|16128013|ref|NP_414560.1| sodium-proton antiporter (nhaA b0019 exp) [Escherichia coli str. K-12 substr. MG1655] 388 NEW_HUMAN_DOMAINS 62-133 -5.160 16  sp|A6NCN8|YL021_HUMAN Uncharacterized protein ENSP00000372125 OS=Homo sapiens PE=4 SV=2 (Range: 144-249)
19 gi|16128014|ref|NP_414561.1| DNA-binding transcriptional activator (nhaR b0020 exp) [Escherichia coli str. K-12 substr. MG1655] 301 NEW_HUMAN_DOMAINS 4-91 -6.540 14  sp|O60313|OPA1_HUMAN Dynamin-like 120 kDa protein, mitochondrial OS=Homo sapiens GN=OPA1 PE=1 SV=3 (Range: 825-960)
20 gi|16128015|ref|NP_414562.1| IS1 transposase B (insB b0021 exp) [Escherichia coli str. K-12 substr. MG1655] 167 NEW_HUMAN_DOMAINS 1-58 -6.190 14  sp|Q14153|FA53B_HUMAN Protein FAM53B OS=Homo sapiens GN=FAM53B PE=1 SV=2 (Range: 34-90)


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Rychlewski L, Zhang B, Godzik A. Functional insights from structural predictions: analysis of the Escherichia coli genome. Protein Sci. 1999 Mar;8(3):614-24.