FFAS03 list of results E.rectale / PDB0516

Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 3770 next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|238922433|ref|YP_002935946.1| chromosomal replication initiation protein (EUBREC_0001) [Eubacterium rectale ATCC 33656] 453 PDB0516 7-453 -128.000 34 2z4r_A mol:protein length:440 Chromosomal replication initiator protein dna
2 gi|238922434|ref|YP_002935947.1| DNA polymerase III, beta subunit (EUBREC_0002) [Eubacterium rectale ATCC 33656] 370 PDB0516 1-370 -114.000 100 3t0p_A mol:protein length:371 DNA polymerase III, beta subunit
3 gi|238922435|ref|YP_002935948.1| hypothetical protein (EUBREC_0003) [Eubacterium rectale ATCC 33656] 71 PDB0516 9-70 -41.600 35 1p9k_A mol:protein length:79 orf, hypothetical protein
4 gi|238922436|ref|YP_002935949.1| DNA replication and repair protein RecF (EUBREC_0004) [Eubacterium rectale ATCC 33656] 362 PDB0516 1-362 -118.000 28 2o5v_A mol:protein length:359 DNA replication and repair protein recF
5 gi|238922437|ref|YP_002935950.1| DNA gyrase, B subunit (EUBREC_0005) [Eubacterium rectale ATCC 33656] 645 PDB0516 3-644 -186.000 54 4juo_C mol:protein length:670 DNA topoisomerase 4 subunit B
6 gi|238922438|ref|YP_002935951.1| DNA gyrase, A subunit (EUBREC_0006) [Eubacterium rectale ATCC 33656] 852 PDB0516 1-505 -145.000 60 4ddq_A mol:protein length:502 DNA gyrase subunit A
31-739 -124.000 37 1zvu_A mol:protein length:716 Topoisomerase IV subunit A
505-811 -65.200 38 1zi0_A mol:protein length:307 DNA gyrase subunit A
7 gi|238922439|ref|YP_002935952.1| hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit (EUBREC_0007) [Eubacterium rectale ATCC 33656] 281 PDB0516 4-186 -6.410 14 1q6u_A mol:protein length:245 FKBP-type peptidyl-prolyl cis-trans isomerase
8 gi|238922440|ref|YP_002935953.1| hypothetical protein (EUBREC_0008) [Eubacterium rectale ATCC 33656] 47 PDB0516 33-47 -5.510 26 2lsm_A mol:protein length:61 DNA-packaging protein FI
9 gi|238922441|ref|YP_002935954.1| fumarate hydratase subunit B (EUBREC_0009) [Eubacterium rectale ATCC 33656] 183 PDB0516 1-175 -83.100 42 2isb_A mol:protein length:192 Fumarase
10 gi|238922442|ref|YP_002935955.1| putative oxidoreductase (EUBREC_0016) [Eubacterium rectale ATCC 33656] 329 PDB0516 1-324 -105.000 23 3evn_A mol:protein length:329 Oxidoreductase, Gfo/Idh/MocA family
11 gi|238922443|ref|YP_002935956.1| transcription repressor of fructose operon FruR (EUBREC_0017) [Eubacterium rectale ATCC 33656] 247 PDB0516 1-57 -19.700 21 4hob_A mol:protein length:69 Putative uncharacterized protein
3-167 -11.000 12 3sqn_A mol:protein length:485 Conserved domain protein
79-212 -10.700 23 3ixq_A mol:protein length:226 Ribose-5-phosphate isomerase A
12 gi|238922444|ref|YP_002935957.1| fructose-1-phosphate kinase (EUBREC_0018) [Eubacterium rectale ATCC 33656] 305 PDB0516 1-304 -113.000 43 2jg5_A mol:protein length:306 FRUCTOSE 1-PHOSPHATE KINASE
13 gi|238922445|ref|YP_002935958.1| PTS system, fructose-specific, IIABC component (EUBREC_0019) [Eubacterium rectale ATCC 33656] 642 PDB0516 1-636 -9.910 12 4yzf_A mol:protein length:911 Band 3 anion transport protein
2-149 -48.500 28 2a0j_A mol:protein length:149 PTS system, nitrogen regulatory IIA protein
173-278 -66.000 51 2r4q_A mol:protein length:106 Phosphotransferase system (PTS) fructose-spec
14 gi|238922446|ref|YP_002935959.1| chaperone protein DnaK (EUBREC_0020) [Eubacterium rectale ATCC 33656] 586 PDB0516 1-585 -178.000 52 2kho_A mol:protein length:605 Heat shock protein 70
15 gi|238922447|ref|YP_002935960.1| hypothetical protein (EUBREC_0021) [Eubacterium rectale ATCC 33656] 290 PDB0516 2-275 -7.690 9 4m0m_A mol:protein length:756 Putative uncharacterized protein
16 gi|238922448|ref|YP_002935961.1| DNA-binding response regulator (EUBREC_0022) [Eubacterium rectale ATCC 33656] 230 PDB0516 2-227 -88.500 32 2oqr_A mol:protein length:230 Sensory transduction protein regX3
17 gi|238922449|ref|YP_002935962.1|(removed signalp:1-29) hypothetical protein (EUBREC_0023) [Eubacterium rectale ATCC 33656] 428 PDB0516 126-427 -34.700 18 4biu_A mol:protein length:298 SENSOR PROTEIN CPXA
182-423 -41.700 21 4q20_A mol:protein length:268 Sensor protein DivL
18 gi|238922450|ref|YP_002935963.1| hypothetical protein (EUBREC_0024) [Eubacterium rectale ATCC 33656] 761 PDB0516 17-761 -148.000 21 1aco_A mol:protein length:754 ACONITASE
19 gi|238922451|ref|YP_002935964.1| hypothetical protein (EUBREC_0025) [Eubacterium rectale ATCC 33656] 437 PDB0516 277-405 -7.890 13 4hzu_S mol:protein length:166 Predicted membrane protein
20 gi|238922452|ref|YP_002935965.1| hypothetical protein (EUBREC_0026) [Eubacterium rectale ATCC 33656] 877 PDB0516 1-169 -17.100 14 5aio_A mol:protein length:448 TRANSCRIPTION FACTOR TAU 131 KDA SUBUNIT
1-208 -14.000 13 3qky_A mol:protein length:261 Outer membrane assembly lipoprotein YfiO
1-241 -13.200 13 4rg6_A mol:protein length:560 Cell division cycle protein 27 homolog
605-877 -40.200 17 3syk_A mol:protein length:309 Protein CbbX

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

Comments and questions to: webmaster

#	Query	Length	Result vs.	Range	Score	%id	Covered by template(s)
1	`gi\|238922433\|ref\|YP_002935946.1\| chromosomal replication initiation protein (EUBREC_0001) [Eubacterium rectale ATCC 33656]`	`453`	`PDB0516`	`7-453`	`-128.000`	`34`	`2z4r_A mol:protein length:440 Chromosomal replication initiator protein dna`
2	`gi\|238922434\|ref\|YP_002935947.1\| DNA polymerase III, beta subunit (EUBREC_0002) [Eubacterium rectale ATCC 33656]`	`370`	`PDB0516`	`1-370`	`-114.000`	`100`	`3t0p_A mol:protein length:371 DNA polymerase III, beta subunit`
3	`gi\|238922435\|ref\|YP_002935948.1\| hypothetical protein (EUBREC_0003) [Eubacterium rectale ATCC 33656]`	`71`	`PDB0516`	`9-70`	`-41.600`	`35`	`1p9k_A mol:protein length:79 orf, hypothetical protein`
4	`gi\|238922436\|ref\|YP_002935949.1\| DNA replication and repair protein RecF (EUBREC_0004) [Eubacterium rectale ATCC 33656]`	`362`	`PDB0516`	`1-362`	`-118.000`	`28`	`2o5v_A mol:protein length:359 DNA replication and repair protein recF`
5	`gi\|238922437\|ref\|YP_002935950.1\| DNA gyrase, B subunit (EUBREC_0005) [Eubacterium rectale ATCC 33656]`	`645`	`PDB0516`	`3-644`	`-186.000`	`54`	`4juo_C mol:protein length:670 DNA topoisomerase 4 subunit B`
6	`gi\|238922438\|ref\|YP_002935951.1\| DNA gyrase, A subunit (EUBREC_0006) [Eubacterium rectale ATCC 33656]`	`852`	`PDB0516`	`1-505`	`-145.000`	`60`	`4ddq_A mol:protein length:502 DNA gyrase subunit A`
				`31-739`	`-124.000`	`37`	`1zvu_A mol:protein length:716 Topoisomerase IV subunit A`
				`505-811`	`-65.200`	`38`	`1zi0_A mol:protein length:307 DNA gyrase subunit A`
7	`gi\|238922439\|ref\|YP_002935952.1\| hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit (EUBREC_0007) [Eubacterium rectale ATCC 33656]`	`281`	`PDB0516`	`4-186`	`-6.410`	`14`	`1q6u_A mol:protein length:245 FKBP-type peptidyl-prolyl cis-trans isomerase`
8	`gi\|238922440\|ref\|YP_002935953.1\| hypothetical protein (EUBREC_0008) [Eubacterium rectale ATCC 33656]`	`47`	`PDB0516`	`33-47`	`-5.510`	`26`	`2lsm_A mol:protein length:61 DNA-packaging protein FI`
9	`gi\|238922441\|ref\|YP_002935954.1\| fumarate hydratase subunit B (EUBREC_0009) [Eubacterium rectale ATCC 33656]`	`183`	`PDB0516`	`1-175`	`-83.100`	`42`	`2isb_A mol:protein length:192 Fumarase`
10	`gi\|238922442\|ref\|YP_002935955.1\| putative oxidoreductase (EUBREC_0016) [Eubacterium rectale ATCC 33656]`	`329`	`PDB0516`	`1-324`	`-105.000`	`23`	`3evn_A mol:protein length:329 Oxidoreductase, Gfo/Idh/MocA family`
11	`gi\|238922443\|ref\|YP_002935956.1\| transcription repressor of fructose operon FruR (EUBREC_0017) [Eubacterium rectale ATCC 33656]`	`247`	`PDB0516`	`1-57`	`-19.700`	`21`	`4hob_A mol:protein length:69 Putative uncharacterized protein`
				`3-167`	`-11.000`	`12`	`3sqn_A mol:protein length:485 Conserved domain protein`
				`79-212`	`-10.700`	`23`	`3ixq_A mol:protein length:226 Ribose-5-phosphate isomerase A`
12	`gi\|238922444\|ref\|YP_002935957.1\| fructose-1-phosphate kinase (EUBREC_0018) [Eubacterium rectale ATCC 33656]`	`305`	`PDB0516`	`1-304`	`-113.000`	`43`	`2jg5_A mol:protein length:306 FRUCTOSE 1-PHOSPHATE KINASE`
13	`gi\|238922445\|ref\|YP_002935958.1\| PTS system, fructose-specific, IIABC component (EUBREC_0019) [Eubacterium rectale ATCC 33656]`	`642`	`PDB0516`	`1-636`	`-9.910`	`12`	`4yzf_A mol:protein length:911 Band 3 anion transport protein`
				`2-149`	`-48.500`	`28`	`2a0j_A mol:protein length:149 PTS system, nitrogen regulatory IIA protein`
				`173-278`	`-66.000`	`51`	`2r4q_A mol:protein length:106 Phosphotransferase system (PTS) fructose-spec`
14	`gi\|238922446\|ref\|YP_002935959.1\| chaperone protein DnaK (EUBREC_0020) [Eubacterium rectale ATCC 33656]`	`586`	`PDB0516`	`1-585`	`-178.000`	`52`	`2kho_A mol:protein length:605 Heat shock protein 70`
15	`gi\|238922447\|ref\|YP_002935960.1\| hypothetical protein (EUBREC_0021) [Eubacterium rectale ATCC 33656]`	`290`	`PDB0516`	`2-275`	`-7.690`	`9`	`4m0m_A mol:protein length:756 Putative uncharacterized protein`
16	`gi\|238922448\|ref\|YP_002935961.1\| DNA-binding response regulator (EUBREC_0022) [Eubacterium rectale ATCC 33656]`	`230`	`PDB0516`	`2-227`	`-88.500`	`32`	`2oqr_A mol:protein length:230 Sensory transduction protein regX3`
17	`gi\|238922449\|ref\|YP_002935962.1\|(removed signalp:1-29) hypothetical protein (EUBREC_0023) [Eubacterium rectale ATCC 33656]`	`428`	`PDB0516`	`126-427`	`-34.700`	`18`	`4biu_A mol:protein length:298 SENSOR PROTEIN CPXA`
				`182-423`	`-41.700`	`21`	`4q20_A mol:protein length:268 Sensor protein DivL`
18	`gi\|238922450\|ref\|YP_002935963.1\| hypothetical protein (EUBREC_0024) [Eubacterium rectale ATCC 33656]`	`761`	`PDB0516`	`17-761`	`-148.000`	`21`	`1aco_A mol:protein length:754 ACONITASE`
19	`gi\|238922451\|ref\|YP_002935964.1\| hypothetical protein (EUBREC_0025) [Eubacterium rectale ATCC 33656]`	`437`	`PDB0516`	`277-405`	`-7.890`	`13`	`4hzu_S mol:protein length:166 Predicted membrane protein`
20	`gi\|238922452\|ref\|YP_002935965.1\| hypothetical protein (EUBREC_0026) [Eubacterium rectale ATCC 33656]`	`877`	`PDB0516`	`1-169`	`-17.100`	`14`	`5aio_A mol:protein length:448 TRANSCRIPTION FACTOR TAU 131 KDA SUBUNIT`
				`1-208`	`-14.000`	`13`	`3qky_A mol:protein length:261 Outer membrane assembly lipoprotein YfiO`
				`1-241`	`-13.200`	`13`	`4rg6_A mol:protein length:560 Cell division cycle protein 27 homolog`
				`605-877`	`-40.200`	`17`	`3syk_A mol:protein length:309 Protein CbbX`