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Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:

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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 55674next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 sp|Q29940|1B59_HUMAN(removed signalp:1-24) HLA class I histocompatibility antigen, B-59 alpha chain OS=Homo sapiens GN=HLA-B PE=2 SV=1 338 PDB1018 1-338 -130.000 84  6eny_F mol:protein length:341 HLA class I histocompatibility antigen, A-3 alpha chain
2 sp|P08908|5HT1A_HUMAN 5-hydroxytryptamine receptor 1A OS=Homo sapiens GN=HTR1A PE=1 SV=3 422 PDB1018 17-421 -106.000 35  4iaq_A mol:protein length:403 Chimera protein of human 5-hydroxytryptamine receptor 1B and E. Coli soluble cytochrome b562
3 sp|Q15758|AAAT_HUMAN Neutral amino acid transporter B(0) OS=Homo sapiens GN=SLC1A5 PE=1 SV=2 541 PDB1018 1-541 -125.000 100  6gct_A mol:protein length:541 Neutral amino acid transporter B(0)
4 sp|P61221|ABCE1_HUMAN ATP-binding cassette sub-family E member 1 OS=Homo sapiens GN=ABCE1 PE=1 SV=1 599 PDB1018 1-599 -109.000 65  3j16_B mol:protein length:608 Rli1p
5 sp|P07108|ACBP_HUMAN Acyl-CoA-binding protein OS=Homo sapiens GN=DBI PE=1 SV=2 87 PDB1018 1-87 -65.000 100  2cb8_A mol:protein length:87 ACYL-COA-BINDING PROTEIN
6 sp|O15254|ACOX3_HUMAN Peroxisomal acyl-coenzyme A oxidase 3 OS=Homo sapiens GN=ACOX3 PE=1 SV=2 (Range: 1-300) 300 PDB1018 18-300 -91.000 29  1is2_A mol:protein length:661 acyl-CoA oxidase
7 sp|O15254|ACOX3_HUMAN Peroxisomal acyl-coenzyme A oxidase 3 OS=Homo sapiens GN=ACOX3 PE=1 SV=2 (Range: 151-450) 300 PDB1018 1-300 -112.000 37  5y9d_A mol:protein length:709 Acyl-coenzyme A oxidase 1
8 sp|O15254|ACOX3_HUMAN Peroxisomal acyl-coenzyme A oxidase 3 OS=Homo sapiens GN=ACOX3 PE=1 SV=2 (Range: 301-600) 300 PDB1018 1-300 -77.700 25  5ys9_A mol:protein length:708 Acyl-coenzyme A oxidase 3
9 sp|O15254|ACOX3_HUMAN Peroxisomal acyl-coenzyme A oxidase 3 OS=Homo sapiens GN=ACOX3 PE=1 SV=2 (Range: 451-700) 250 PDB1018 1-250 -58.300 23  1is2_A mol:protein length:661 acyl-CoA oxidase
10 sp|Q9H013|ADA19_HUMAN(removed signalp:1-25) Disintegrin and metalloproteinase domain-containing protein 19 OS=Homo sapiens GN=ADAM19 PE=1 SV=3 (Range: 1-300) 300 PDB1018 1-300 -12.500 3p24_A mol:protein length:397 BFT-3
179-300 -57.900 49  1r54_A mol:protein length:214 ADAM 33
11 sp|Q9H013|ADA19_HUMAN(removed signalp:1-25) Disintegrin and metalloproteinase domain-containing protein 19 OS=Homo sapiens GN=ADAM19 PE=1 SV=3 (Range: 151-450) 300 PDB1018 20-300 -94.900 39  2ero_A mol:protein length:427 vascular apoptosis-inducing protein 1
12 sp|Q9H013|ADA19_HUMAN(removed signalp:1-25) Disintegrin and metalloproteinase domain-containing protein 19 OS=Homo sapiens GN=ADAM19 PE=1 SV=3 (Range: 301-600) 300 PDB1018 1-259 -81.000 40  2dw0_A mol:protein length:419 Catrocollastatin
1-299 -80.900 35  3g5c_A mol:protein length:510 ADAM 22
13 sp|Q9H013|ADA19_HUMAN(removed signalp:1-25) Disintegrin and metalloproteinase domain-containing protein 19 OS=Homo sapiens GN=ADAM19 PE=1 SV=3 (Range: 451-750) 300 PDB1018 1-227 -74.400 31  3g5c_A mol:protein length:510 ADAM 22
14 sp|Q9H013|ADA19_HUMAN(removed signalp:1-25) Disintegrin and metalloproteinase domain-containing protein 19 OS=Homo sapiens GN=ADAM19 PE=1 SV=3 (Range: 601-900) 300 PDB1018 1-77 -31.100 31  3g5c_A mol:protein length:510 ADAM 22
53-299 -13.100 11  5ife_C mol:protein length:1304 Splicing factor 3B subunit 1
15 sp|Q9H013|ADA19_HUMAN(removed signalp:1-25) Disintegrin and metalloproteinase domain-containing protein 19 OS=Homo sapiens GN=ADAM19 PE=1 SV=3 (Range: 751-930) 180 PDB1018 1-180 -25.500 3jcm_A mol:protein length:2413 Pre-mRNA-splicing factor 8
16 sp|P11766|ADHX_HUMAN Alcohol dehydrogenase class-3 OS=Homo sapiens GN=ADH5 PE=1 SV=4 374 PDB1018 1-374 -114.000 100  1mc5_A mol:protein length:374 Alcohol dehydrogenase class III chi chain
17 sp|Q99490|AGAP2_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=AGAP2 PE=1 SV=2 (Range: 1-300) 300 PDB1018 2-300 -25.600 5ife_C mol:protein length:1304 Splicing factor 3B subunit 1
18 sp|Q99490|AGAP2_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=AGAP2 PE=1 SV=2 (Range: 151-450) 300 PDB1018 2-288 -11.700 10  5ife_C mol:protein length:1304 Splicing factor 3B subunit 1
244-300 -20.500 45  3ihw_A mol:protein length:184 CENTG3
19 sp|Q99490|AGAP2_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=AGAP2 PE=1 SV=2 (Range: 301-600) 300 PDB1018 92-300 -59.700 16  5ub8_A mol:protein length:222 Likely rab family GTP-binding protein
100-277 -72.900 98  2bmj_A mol:protein length:178 CENTAURIN GAMMA 1
20 sp|Q99490|AGAP2_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=AGAP2 PE=1 SV=2 (Range: 451-750) 300 PDB1018 1-127 -57.900 100  2bmj_A mol:protein length:178 CENTAURIN GAMMA 1


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Godzik A., Rychlewski L. A support vector machine approach to the identification of phosphorylation sites. Cell Mol Biol Lett. 2005;10(1):73-89.