current user: public

Please be advised that we have recently moved our server to a new location. We tried our best to fully test all functions on the website, but if something does not work for you please let us know.

Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:

Page size:   Sort by score   Show only entries containing string:

Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 55674next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 sp|Q29940|1B59_HUMAN(removed signalp:1-24) HLA class I histocompatibility antigen, B-59 alpha chain OS=Homo sapiens GN=HLA-B PE=2 SV=1 338 PfamA32U 1-179 -62.800 73  PF00129.18; HA10_MOUSE/25-203; Class I Histocompatibility antigen, domains alpha 1 and 2
181-287 -33.600 15  PF15028.6; A0A2I3G3P5_NOMLE/20-146; Pre-T-cell antigen receptor
190-266 -36.100 23  PF07654.15; H9GZQ9_HORSE/236-322; Immunoglobulin C1-set domain
2 sp|P08908|5HT1A_HUMAN 5-hydroxytryptamine receptor 1A OS=Homo sapiens GN=HTR1A PE=1 SV=3 422 PfamA32U 32-422 -27.600 PF04789.15; E3LU62_CAERE/638-942; Protein of unknown function (DUF621 topsan)
53-400 -90.500 36  PF00001.21; HRH2_CANLF/35-288; 7 transmembrane receptor (rhodopsin family)
3 sp|Q15758|AAAT_HUMAN Neutral amino acid transporter B(0) OS=Homo sapiens GN=SLC1A5 PE=1 SV=2 541 PfamA32U 54-484 -89.600 36  PF00375.18; Q8EU68_OCEIH/3-398; Sodium:dicarboxylate symporter family
4 sp|P61221|ABCE1_HUMAN ATP-binding cassette sub-family E member 1 OS=Homo sapiens GN=ABCE1 PE=1 SV=1 599 PfamA32U 70-279 -11.400 12  PF13175.6; I1YS32_PREI7/1-378; AAA ATPase domain
100-245 -31.700 19  PF00005.27; YTFR_ECOLI/25-174; ABC transporter
116-545 -23.500 PF09818.9; Q10V01_TRIEI/4-493; Predicted ATPase of the ABC class
5 sp|P07108|ACBP_HUMAN Acyl-CoA-binding protein OS=Homo sapiens GN=DBI PE=1 SV=2 87 PfamA32U 3-83 -60.100 34  PF00887.19; B7PHH9_IXOSC/19-99; Acyl CoA binding protein
6 sp|O15254|ACOX3_HUMAN Peroxisomal acyl-coenzyme A oxidase 3 OS=Homo sapiens GN=ACOX3 PE=1 SV=2 (Range: 1-300) 300 PfamA32U 31-153 -28.000 11  PF14749.6; F1R3V9_DANRE/15-133; Acyl-coenzyme A oxidase N-terminal
155-266 -28.200 26  PF02770.19; Q7MW70_PORGI/172-269; Acyl-CoA dehydrogenase, middle domain
7 sp|O15254|ACOX3_HUMAN Peroxisomal acyl-coenzyme A oxidase 3 OS=Homo sapiens GN=ACOX3 PE=1 SV=2 (Range: 151-450) 300 PfamA32U 5-116 -28.100 26  PF02770.19; Q7MW70_PORGI/172-269; Acyl-CoA dehydrogenase, middle domain
144-300 -25.500 17  PF00441.24; I6XFA9_MYCTU/253-403; Acyl-CoA dehydrogenase, C-terminal domain
8 sp|O15254|ACOX3_HUMAN Peroxisomal acyl-coenzyme A oxidase 3 OS=Homo sapiens GN=ACOX3 PE=1 SV=2 (Range: 301-600) 300 PfamA32U 1-166 -35.100 19  PF00441.24; I6XFA9_MYCTU/253-403; Acyl-CoA dehydrogenase, C-terminal domain
210-300 -26.800 42  PF01756.19; K1PYL9_CRAGI/349-534; Acyl-CoA oxidase
9 sp|O15254|ACOX3_HUMAN Peroxisomal acyl-coenzyme A oxidase 3 OS=Homo sapiens GN=ACOX3 PE=1 SV=2 (Range: 451-700) 250 PfamA32U 60-242 -74.500 48  PF01756.19; K1PYL9_CRAGI/349-534; Acyl-CoA oxidase
10 sp|Q9H013|ADA19_HUMAN(removed signalp:1-25) Disintegrin and metalloproteinase domain-containing protein 19 OS=Homo sapiens GN=ADAM19 PE=1 SV=3 (Range: 1-300) 300 PfamA32U 2-137 -52.000 14  PF01562.19; F4WTG8_ACREC/43-191; Reprolysin family propeptide
185-300 -54.300 24  PF01421.19; ADAM2_BOVIN/178-375; Reprolysin (M12B) family zinc metalloprotease
11 sp|Q9H013|ADA19_HUMAN(removed signalp:1-25) Disintegrin and metalloproteinase domain-containing protein 19 OS=Homo sapiens GN=ADAM19 PE=1 SV=3 (Range: 151-450) 300 PfamA32U 35-233 -77.100 23  PF01421.19; ADAM2_BOVIN/178-375; Reprolysin (M12B) family zinc metalloprotease
250-300 -25.500 49  PF00200.23; G3I9D8_CRIGR/417-489; Disintegrin
12 sp|Q9H013|ADA19_HUMAN(removed signalp:1-25) Disintegrin and metalloproteinase domain-containing protein 19 OS=Homo sapiens GN=ADAM19 PE=1 SV=3 (Range: 301-600) 300 PfamA32U 1-83 -28.100 24  PF01421.19; ADAM2_BOVIN/178-375; Reprolysin (M12B) family zinc metalloprotease
100-172 -38.100 49  PF00200.23; G3I9D8_CRIGR/417-489; Disintegrin
177-293 -42.100 32  PF08516.12; F7FQP8_MONDO/502-619; ADAM cysteine-rich
13 sp|Q9H013|ADA19_HUMAN(removed signalp:1-25) Disintegrin and metalloproteinase domain-containing protein 19 OS=Homo sapiens GN=ADAM19 PE=1 SV=3 (Range: 451-750) 300 PfamA32U 12-248 -10.600 PF06656.11; GLYC_RSVT/41-824; Tenuivirus PVC2 protein
27-148 -38.200 29  PF08516.12; F7FQP8_MONDO/502-619; ADAM cysteine-rich
14 sp|Q9H013|ADA19_HUMAN(removed signalp:1-25) Disintegrin and metalloproteinase domain-containing protein 19 OS=Homo sapiens GN=ADAM19 PE=1 SV=3 (Range: 601-900) 300 PfamA32U 2-299 -13.000 PF15782.5; H2M7V5_ORYLA/1-1933; Gene regulated by oestrogen in breast cancer
15 sp|Q9H013|ADA19_HUMAN(removed signalp:1-25) Disintegrin and metalloproteinase domain-containing protein 19 OS=Homo sapiens GN=ADAM19 PE=1 SV=3 (Range: 751-930) 180 PfamA32U 2-180 -20.300 12  PF11725.8; Q887C9_PSESM/17-1794; AvrE-family Type-III effector proteins (T3Es)
16 sp|P11766|ADHX_HUMAN Alcohol dehydrogenase class-3 OS=Homo sapiens GN=ADH5 PE=1 SV=4 374 PfamA32U 32-160 -35.400 37  PF08240.12; A9CHB7_AGRFC/24-130; Alcohol dehydrogenase GroES-like domain
182-374 -22.900 14  PF16912.5; I7BJ28_NATSJ/144-370; Glucose dehydrogenase C-terminus
202-333 -27.500 21  PF00107.26; ADH_SULSO/182-311; Zinc-binding dehydrogenase
17 sp|Q99490|AGAP2_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=AGAP2 PE=1 SV=2 (Range: 1-300) 300 PfamA32U 2-254 -15.200 PF11725.8; Q887C9_PSESM/17-1794; AvrE-family Type-III effector proteins (T3Es)
122-298 -13.400 10  PF05934.11; CLCC1_RAT/3-541; Mid-1-related chloride channel (MCLC)
18 sp|Q99490|AGAP2_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=AGAP2 PE=1 SV=2 (Range: 151-450) 300 PfamA32U 17-299 -10.400 12  PF11725.8; Q887C9_PSESM/17-1794; AvrE-family Type-III effector proteins (T3Es)
19 sp|Q99490|AGAP2_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=AGAP2 PE=1 SV=2 (Range: 301-600) 300 PfamA32U 89-292 -12.800 11  PF05049.13; Q9DCE9_MOUSE/50-412; Interferon-inducible GTPase (IIGP)
108-268 -56.200 28  PF00071.22; RAB9A_CANLF/9-174; Ras family
20 sp|Q99490|AGAP2_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=AGAP2 PE=1 SV=2 (Range: 451-750) 300 PfamA32U 1-118 -45.200 25  PF00071.22; RAB9A_CANLF/9-174; Ras family


FFAS is supported by the NIH grant R01-GM087218-01
1 2 5 3 1 0   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Godzik A., Rychlewski L. A support vector machine approach to the identification of phosphorylation sites. Cell Mol Biol Lett. 2005;10(1):73-89.