current user: public

Please be advised that we have recently moved our server to a new location. We tried our best to fully test all functions on the website, but if something does not work for you please let us know.

Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:

Page size:   Sort by score   Show only entries containing string:

Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 182next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 HGC00024 gi|162813637|dbj|BABA01031072.1|2.0 TMP01508; 217 HGM_OVER 1-217 -24.300 13  PB001404 Q2S5L8_SALRD/1-256 PB001404; Pfam-B_1404;
2 HGC00044 gi|162658718|dbj|BAAX01000887.1|1.0 TMP00920; 360 HGM_OVER 61-183 -9.730 10  HGC01213 gi|163579070|dbj|BABE01006032.1|2.0 TMP01709;
3 HGC00106 gi|162841414|dbj|BABA01003295.1|1.0 TMP01000; 81 HGM_OVER 1-81 -2.680 18  PB017610 Q11T14_CYTH3/22-188 PB017610; Pfam-B_17610;
4 HGC00150 gi|162733542|dbj|BAAZ01030454.1|1.0 TMP01074; 227 HGM_OVER 10-225 -3.720 10  PB034679 gi|150005530|ref|YP_001300274.1| hypothetical protein BVU_3014 [Bacteroides vulgatus ATCC 8482]gi|149933954|gb|ABR40652.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
5 HGC00164 gi|163636082|dbj|BABG01000191.1|4.0 TMP00833; 173 HGM_OVER 72-146 -4.860 13  PB045813 Q5LF03_BACFN/1-275 PB045813; Pfam-B_45813;
6 HGC00166 gi|163579340|dbj|BABE01005762.1|1.0 TMP00473; 223 HGM_OVER 1-208 -13.200 10  PB001025 Q1QFV3_NITHX/1-288 PB001025; Pfam-B_1025;
7 HGC00248 gi|162576253|dbj|BAAV01029229.1|2.0 TMP00024; 121 HGM_OVER 96-121 -3.020 23  HGC00915 gi|162810474|dbj|BABA01034235.1|2.0 TMP01234;
8 HGC00267 gi|163310129|dbj|BABD01000566.1|6.0 TMP00066; 164 HGM_OVER 2-101 -3.950 10  PB029229 gi|150007903|ref|YP_001302646.1| hypothetical protein BDI_1263 [Parabacteroides distasonis ATCC 8503]gi|149936327|gb|ABR43024.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503]
9 HGC00311 gi|163635536|dbj|BABG01000737.1|2.0 TMP00178; 122 HGM_OVER 1-95 -10.300 21  HGC00509 gi|162658693|dbj|BAAX01000912.1|3.0 TMP00561;
10 HGC00374 gi|162831834|dbj|BABA01012875.1|1.0 TMP00304; 200 HGM_OVER 9-38 -3.730 16  PB011051 Q8A0P0_BACTN/1-227 PB011051; Pfam-B_11051;
11 HGC00422 gi|163631722|dbj|BABG01004545.1|2.0 TMP00397; 274 HGM_OVER 174-274 -4.430 PB006205 Q3F123_BACTI/1-181 PB006205; Pfam-B_6205;
12 HGC00429 gi|162734516|dbj|BAAZ01029480.1|1.0 TMP00411; 255 HGM_OVER 191-255 -5.220 PB006154 _JGI.0331794_ 2004021056 [Human Gut Community Subject 7]
13 HGC00485 gi|163636056|dbj|BABG01000217.1|3.0 TMP00523; 127 HGM_OVER 56-127 -5.440 15  PB008806 Q5L9W8_BACFN/1-127 PB008806; Pfam-B_8806;
14 HGC00509 gi|162658693|dbj|BAAX01000912.1|3.0 TMP00561; 136 HGM_OVER 33-127 -10.300 21  HGC00311 gi|163635536|dbj|BABG01000737.1|2.0 TMP00178;
15 HGC00518 gi|162728471|dbj|BAAY01000490.1|2.0 TMP00574; 92 HGM_OVER 58-92 -4.170 14  PB006154 _JGI.0331794_ 2004021056 [Human Gut Community Subject 7]
16 HGC00522 gi|163636101|dbj|BABG01000172.1|3.0 TMP00580; 203 HGM_OVER 2-201 -4.710 11  PB001823 Q5L7Q9_BACFN/1-326 PB001823; Pfam-B_1823;
17 HGC00552 gi|162599220|dbj|BAAV01006262.1|2.0 TMP00636; 115 HGM_OVER 1-109 -8.770 PB042013 A7V626_BACUN/1-162 PB042013; Pfam-B_42013;
18 HGC00573 gi|163306732|dbj|BABD01003960.1|2.0 TMP00669; 125 HGM_OVER 12-123 -3.920 12  HGC00870 gi|163286116|dbj|BABD01024572.1|2.0 TMP01154;
19 HGC00579 gi|163284429|dbj|BABD01026259.1|2.0 TMP00679; 172 HGM_OVER 131-169 -4.540 20  PB012954 Q5LF97_BACFN/1-383 PB012954; Pfam-B_12954;
20 HGC00593 gi|162858151|dbj|BABB01011554.1|1.0 TMP00709; 112 HGM_OVER 25-112 -8.160 20  PB001708 Q3IRP6_NATPD/1-505 PB001708; Pfam-B_1708;


FFAS is supported by the NIH grant R01-GM087218-01
1 2 5 9 7 1   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;