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Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:

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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 182next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 HGC00024 gi|162813637|dbj|BABA01031072.1|2.0 TMP01508; 217 VFDB 1-212 -8.200 [R] COG4105 DNA uptake lipoprotein
2 HGC00044 gi|162658718|dbj|BAAX01000887.1|1.0 TMP00920; 360 VFDB 61-171 -10.000 [U] KOG3317 Translocon-associated complex TRAP, beta subunit
3 HGC00106 gi|162841414|dbj|BABA01003295.1|1.0 TMP01000; 81 VFDB 1-63 -7.140 15  [S] COG3007 Uncharacterized paraquat-inducible protein B
4 HGC00150 gi|162733542|dbj|BAAZ01030454.1|1.0 TMP01074; 227 VFDB 2-150 -6.530 10  [P] COG0783 DNA-binding ferritin-like protein (oxidative damage protectant)
5 HGC00164 gi|163636082|dbj|BABG01000191.1|4.0 TMP00833; 173 VFDB 1-173 -40.100 15  [R] COG3550 Uncharacterized protein related to capsule biosynthesis enzymes
6 HGC00166 gi|163579340|dbj|BABE01005762.1|1.0 TMP00473; 223 VFDB 24-220 -19.900 14  [K] COG5340 Predicted transcriptional regulator
7 HGC00248 gi|162576253|dbj|BAAV01029229.1|2.0 TMP00024; 121 VFDB 76-121 -7.540 17  [R] COG5545 Predicted P-loop ATPase and inactivated derivatives
8 HGC00267 gi|163310129|dbj|BABD01000566.1|6.0 TMP00066; 164 VFDB 1-117 -6.990 17  [G] COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID
9 HGC00311 gi|163635536|dbj|BABG01000737.1|2.0 TMP00178; 122 VFDB 16-109 -5.830 10  [M] COG0818 Diacylglycerol kinase
10 HGC00374 gi|162831834|dbj|BABA01012875.1|1.0 TMP00304; 200 VFDB 4-200 -44.900 41  [R] COG3943 Virulence protein
11 HGC00422 gi|163631722|dbj|BABG01004545.1|2.0 TMP00397; 274 VFDB 126-230 -5.340 15  [S] COG5652 Predicted integral membrane protein
12 HGC00429 gi|162734516|dbj|BAAZ01029480.1|1.0 TMP00411; 255 VFDB 1-254 -6.130 10  [J] KOG0875 60S ribosomal protein L5
13 HGC00485 gi|163636056|dbj|BABG01000217.1|3.0 TMP00523; 127 VFDB 1-119 -5.680 11  [R] KOG2714 SETA binding protein SB1 and related proteins, contain BTB/POZ domain
14 HGC00509 gi|162658693|dbj|BAAX01000912.1|3.0 TMP00561; 136 VFDB 42-119 -6.920 14  [O] COG5380 Lipase chaperone
15 HGC00518 gi|162728471|dbj|BAAY01000490.1|2.0 TMP00574; 92 VFDB 1-91 -26.600 19  [S] COG1598 Uncharacterized conserved protein
16 HGC00522 gi|163636101|dbj|BABG01000172.1|3.0 TMP00580; 203 VFDB 12-184 -11.200 12  [R] COG4914 Predicted nucleotidyltransferase
17 HGC00552 gi|162599220|dbj|BAAV01006262.1|2.0 TMP00636; 115 VFDB 12-112 -7.940 17  [S] KOG4610 Uncharacterized conserved protein
18 HGC00573 gi|163306732|dbj|BABD01003960.1|2.0 TMP00669; 125 VFDB 41-109 -15.800 10  [K] COG3311 Predicted transcriptional regulator
19 HGC00579 gi|163284429|dbj|BABD01026259.1|2.0 TMP00679; 172 VFDB 1-145 -11.200 [M] COG4571 Outer membrane protease
20 HGC00593 gi|162858151|dbj|BABB01011554.1|1.0 TMP00709; 112 VFDB 3-57 -7.680 17  [K] COG5149 Transcription initiation factor IIA, large chain


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Igarashi Y, Eroshkin A, Gramatikova S, Gramatikoff K, Zhang Y, Smith JW,Osterman AL, Godzik A. CutDB: a proteolytic event database. Nucleic Acids Res. 2007 Jan;35(Database issue):D546-9. Epub 2006 Nov 16.