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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 539next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|108885075|ref|NP_072661.2| DNA polymerase III, beta subunit (MG_001) [Mycoplasma genitalium G37] 380 JCSG0516 1-380 -93.400 20  XB5465A NP_344555.1 358603 PDB-2005-08-31
2 gi|108885076|ref|NP_072662.2| DnaJ domain-containing protein (MG_002) [Mycoplasma genitalium G37] 310 JCSG0516 2-308 -109.000 19  TM0849 TM0849 282719 Selected-2001-10-12
3 gi|12044853|ref|NP_072663.1| DNA gyrase subunit B (MG_003) [Mycoplasma genitalium G37] 650 JCSG0516 8-650 -198.000 48  TM0833 TM0833 282703 Purified-2005-04-05
4 gi|12044854|ref|NP_072664.1| DNA gyrase subunit A (MG_004) [Mycoplasma genitalium G37] 836 JCSG0516 17-817 -205.000 40  TM1084 TM1084 282951 Purified-2001-04-24
5 gi|12044855|ref|NP_072665.1| seryl-tRNA synthetase (MG_005) [Mycoplasma genitalium G37] 417 JCSG0516 1-416 -136.000 41  TM1379 TM1379 283240 Crystal|NMR-2004-06-10
6 gi|12044856|ref|NP_072666.1| thymidylate kinase (MG_006) [Mycoplasma genitalium G37] 210 JCSG0516 5-207 -85.800 28  TM1099 TM1099 282965 Purified-2003-11-26
7 gi|12044857|ref|NP_072667.1| DNA polymerase III subunit delta' (MG_007) [Mycoplasma genitalium G37] 254 JCSG0516 2-254 -83.000 15  TM0686 TM0686 282556 Purified-2001-02-28
8 gi|12044858|ref|NP_072668.1| tRNA modification GTPase TrmE (MG_008) [Mycoplasma genitalium G37] 442 JCSG0516 26-427 -25.100 12  TT0527A YP_322606.1 404770 Selected-2009-08-14
220-362 -25.400 23  MJ12771A YP_137184.1 403034 Purified-2009-10-17
9 gi|12044859|ref|NP_072669.1| TatD family deoxyribonuclease (MG_009) [Mycoplasma genitalium G37] 262 JCSG0516 3-261 -105.000 31  TM0667 TM0667 282539 PDB-2002-07-09
10 gi|12044860|ref|NP_072670.1| DNA primase-related protein (MG_010) [Mycoplasma genitalium G37] 218 JCSG0516 5-217 -64.300 19  TM1452 TM1452 283310 Selected-2001-10-12
11 gi|12044861|ref|NP_072671.1| hypothetical protein (MG_011) [Mycoplasma genitalium G37] 287 JCSG0516 9-287 -69.700 16  PU9803J YP_001095162.1 381332 Crystal|NMR-2007-12-14
12 gi|12044862|ref|NP_072672.1| alpha-L-glutamate ligase (MG_012) [Mycoplasma genitalium G37] 287 JCSG0516 8-287 -73.900 18  PU9803C NP_873685.1 381379 Purified-2007-10-11
13 gi|108885077|ref|NP_072673.2| methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase (MG_013) [Mycoplasma genitalium G37] 273 JCSG0516 1-267 -105.000 28  TM1767 TM1767 283621 Purified-2001-12-11
14 gi|12044864|ref|NP_072674.1|(removed signalp:1-25) ABC transporter, ATP-binding/permease protein (MG_014) [Mycoplasma genitalium G37] 598 JCSG0516 1-596 -142.000 30  TM0287 TM0287 282163 Purified-2001-02-27
15 gi|12044865|ref|NP_072675.1|(removed signalp:1-25) ABC transporter, ATP-binding/permease protein (MG_015) [Mycoplasma genitalium G37] 564 JCSG0516 3-564 -157.000 34  TM0288 TM0288 282164 Purified-2001-02-27
16 gi|108885078|ref|NP_072678.2| SNF2 family helicase putative (MG_018) [Mycoplasma genitalium G37] (Range: 1-500) 500 JCSG0516 430-498 -6.290 13  GS13881A YP_001300746.1 384506 Purified-2008-05-17
17 gi|108885078|ref|NP_072678.2| SNF2 family helicase putative (MG_018) [Mycoplasma genitalium G37] (Range: 251-750) 500 JCSG0516 125-500 -38.100 12  FR15026A NP_905257.1 392915 Crystal|NMR-2009-05-13
298-500 -43.800 29  RF3866A.HELLS BC100394 421236 Purified-2011-02-13
18 gi|108885078|ref|NP_072678.2| SNF2 family helicase putative (MG_018) [Mycoplasma genitalium G37] (Range: 501-1000) 500 JCSG0516 48-500 -84.500 29  RF3866A.HELLS BC100394 421236 Purified-2011-02-13
19 gi|108885078|ref|NP_072678.2| SNF2 family helicase putative (MG_018) [Mycoplasma genitalium G37] (Range: 751-1031) 281 JCSG0516 1-281 -54.700 28  RF3866A.HELLS BC100394 421236 Purified-2011-02-13
20 gi|12044869|ref|NP_072679.1| chaperone protein DnaJ (MG_019) [Mycoplasma genitalium G37] 389 JCSG0516 1-378 -136.000 32  TM0849 TM0849 282719 Selected-2001-10-12


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Zmasek CM, Zhang Q, Ye Y, Godzik A. Surprising complexity of the ancestral apoptosis network. Genome Biol. 2007 Oct 24;8(10):R226 [Epub ahead of print]