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# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|15675949|ref|NP_273067.1| putative acetyltransferase (NMB0001) [Neisseria meningitidis MC58] 163 COG1018 5-161 -36.200 15  [E] COG1246 N-acetylglutamate synthase and related acetyltransferases
CSGID 1-161 -42.400 19  IDP95422 set236a-024 [Undefined organism]
H.sapiens 1-162 -52.400 16  sp|Q93015|NAT6_HUMAN N-acetyltransferase 6 OS=Homo sapiens GN=NAT6 PE=2 SV=2
HGM_OVER 90-149 -2.740 20  PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]
NEW_HUMAN_DOMAINS 75-145 -4.900 14  sp|Q8N5I3|KCNRG_HUMAN Potassium channel regulatory protein OS=Homo sapiens GN=KCNRG PE=1 SV=1 (Range: 145-272)
PDB1018 6-162 -48.900 16  5wjd_A mol:protein length:159 CG8481, isoform B
PfamA32U 9-145 -31.600 17  PF12568.8; Q2NWW2_SODGM/2-130; Acetyltransferase (GNAT) domain, PanZ
45-163 -35.300 16  PF17013.5; R0MKA5_NOSB1/22-236; Putative acetyl-transferase
SCOP207 1-158 -40.300 15  d2gana1 d.108.1.1 (A:1-182) Hypothetical protein PH0736 {Pyrococcus horikoshii [TaxId: 53953]}
VFDB 5-161 -36.200 15  [E] COG1246 N-acetylglutamate synthase and related acetyltransferases
2 gi|15675950|ref|NP_273068.1|(removed signalp:1-36) hypothetical protein (NMB0002) [Neisseria meningitidis MC58] 95 COG1018 4-90 -9.080 12  [S] COG3883 Uncharacterized protein conserved in bacteria
CSGID 15-84 -6.240 11  IDP02689 hypothetical protein FTT0903 [Francisella tularensis subsp. tularensis SCHU S4] FTT0903 [Francisella tularensis subsp. tularensis SCHU S4]
H.sapiens 3-92 -9.020 21  sp|Q96JB1|DYH8_HUMAN Dynein heavy chain 8, axonemal OS=Homo sapiens GN=DNAH8 PE=1 SV=2 (Range: 3151-3450)
HGM_OVER 15-61 -3.650 10  PB012472 gi|62259485|gb|AAX77857.1| unknown protein [synthetic construct]
NEW_HUMAN_DOMAINS 3-85 -6.600 12  sp|Q96ER9|CCD51_HUMAN Coiled-coil domain-containing protein 51 OS=Homo sapiens GN=CCDC51 PE=1 SV=2 (Range: 57-180)
PDB1018 3-72 -11.200 11  6a9p_A mol:protein length:106 Glial fibrillary acidic protein
PfamA32U 4-72 -9.210 11  PF08614.11; K5XJL3_AGABU/10-204; Autophagy protein 16 (ATG16)
SCOP207 23-93 -6.070 16  d5azsa_ f.5.1.0 (A:) automated matches {Pseudomonas aeruginosa [TaxId: 208964]}
VFDB 4-90 -9.080 12  [S] COG3883 Uncharacterized protein conserved in bacteria
3 gi|15675951|ref|NP_273069.1| glutamyl-tRNA synthetase (NMB0003) [Neisseria meningitidis MC58] 464 COG1018 1-464 -129.000 31  [J] KOG1149 Glutamyl-tRNA synthetase (mitochondrial)
CSGID 1-464 -132.000 47  IDP90858 Glutamyl-tRNA synthetase (Glutamate--tRNA ligase) (GluRS) O31153 [Vibrio cholerae]
H.sapiens 1-464 -128.000 29  sp|Q5JPH6|SYEM_HUMAN Probable glutamyl-tRNA synthetase, mitochondrial OS=Homo sapiens GN=EARS2 PE=1 SV=2
HGM_OVER 153-323 -3.050 PB001823 Q5L7Q9_BACFN/1-326 PB001823; Pfam-B_1823;
NEW_HUMAN_DOMAINS 235-314 -6.160 15  tr|E9PIN2|E9PIN2_HUMAN Uncharacterized protein OS=Homo sapiens GN=PDE4DIP PE=4 SV=1 (Range: 1-82)
PDB1018 1-464 -133.000 51  4g6z_A mol:protein length:490 Glutamate-tRNA ligase
PfamA32U 2-292 -78.800 23  PF00749.21; SYQ_ECOLI/27-338; tRNA synthetases class I (E and Q), catalytic domain
SCOP207 2-304 -117.000 60  d4g6za1 c.26.1.0 (A:3-304) automated matches {Burkholderia thailandensis [TaxId: 271848]}
305-464 -47.000 36  d4g6za2 a.97.1.0 (A:305-466) automated matches {Burkholderia thailandensis [TaxId: 271848]}
VFDB 1-464 -129.000 31  [J] KOG1149 Glutamyl-tRNA synthetase (mitochondrial)
4 gi|15675952|ref|NP_273070.1|(removed signalp:1-37) EpiH/GdmH-related protein (NMB0004) [Neisseria meningitidis MC58] 177 COG1018 3-168 -51.200 20  [S] COG2949 Uncharacterized membrane protein
CSGID 1-171 -43.400 20  IDP00507 hypothetical protein YPO2511 YPO2511 [Yersinia pestis CO92]
H.sapiens 18-170 -7.510 15  sp|Q7Z444|RASE_HUMAN GTPase ERas OS=Homo sapiens GN=ERAS PE=2 SV=1
HGM_OVER 15-89 -3.080 HGC00166 gi|163579340|dbj|BABE01005762.1|1.0 TMP00473;
NEW_HUMAN_DOMAINS 14-96 -4.990 14  sp|P78559|MAP1A_HUMAN Microtubule-associated protein 1A OS=Homo sapiens GN=MAP1A PE=1 SV=6 (Range: 2693-2803)
PDB1018 10-141 -34.300 16  3ca8_A mol:protein length:266 Protein ydcF
PfamA32U 16-162 -39.200 24  PF02698.17; D5CMM5_SIDLE/81-243; DUF218 topsan domain
SCOP207 12-93 -8.540 13  d1r1ma_ d.79.7.1 (A:) Outer membrane protein class 4, RmpM, C-terminal domain {Neisseria meningitidis [TaxId: 487]}
VFDB 3-168 -51.200 20  [S] COG2949 Uncharacterized membrane protein
5 gi|15675953|ref|NP_273071.1| arsenate reductase (NMB0005) [Neisseria meningitidis MC58] 117 COG1018 4-117 -57.200 24  [P] COG1393 Arsenate reductase and related proteins, glutaredoxin family
CSGID 1-117 -66.500 52  IDP00581 putative arsenate reductase YPO3070 [Yersinia pestis CO92]
H.sapiens 2-94 -10.200 13  sp|Q9NS18|GLRX2_HUMAN(removed signalp:1-21) Glutaredoxin-2, mitochondrial OS=Homo sapiens GN=GLRX2 PE=1 SV=1
HGM_OVER 22-95 -3.740 PB022697 Q5LAY4_BACFN/1-165 PB022697; Pfam-B_22697;
NEW_HUMAN_DOMAINS 33-95 -5.280 14  sp|Q9NRL2|BAZ1A_HUMAN Bromodomain adjacent to zinc finger domain protein 1A OS=Homo sapiens GN=BAZ1A PE=1 SV=2 (Range: 522-611)
PDB1018 1-117 -66.200 52  3rdw_A mol:protein length:121 Putative arsenate reductase
PfamA32U 7-116 -55.500 15  PF03960.15; Q9JZ90_NEIMB/5-114; ArsC family
SCOP207 3-117 -61.300 32  d1j9ba_ c.47.1.12 (A:) Arsenate reductase ArsC {Escherichia coli [TaxId: 562]}
VFDB 4-117 -57.200 24  [P] COG1393 Arsenate reductase and related proteins, glutaredoxin family
6 gi|15675954|ref|NP_273072.1|(removed signalp:1-22) thioredoxin-related protein (NMB0006) [Neisseria meningitidis MC58] 138 COG1018 1-135 -36.700 11  [R] COG3054 Predicted transcriptional regulator
CSGID 1-135 -63.000 25  IDP02519 gene: resA; thiol-disulfide oxidoreductase [Bacillus anthracis str. `Ames Ancestor`] GBAA1494 [Bacillus anthracis str. `Ames Ancestor`]
H.sapiens 6-138 -44.900 13  sp|Q8NBF2|NHLC2_HUMAN NHL repeat-containing protein 2 OS=Homo sapiens GN=NHLRC2 PE=1 SV=1 (Range: 1-300)
HGM_OVER 35-86 -4.680 PB046158 _JGI.0336690_ 2004028347 [Human Gut Community Subject 8]
NEW_HUMAN_DOMAINS 9-34 -6.080 11  sp|A6NFU0|F187A_HUMAN Ig-like V-type domain-containing protein FAM187A OS=Homo sapiens GN=FAM187A PE=3 SV=1 (Range: 142-237)
PDB1018 1-138 -74.900 100  3raz_A mol:protein length:151 Thioredoxin-related protein
PfamA32U 1-116 -55.600 19  PF00578.21; B8CZ50_HALOH/40-156; AhpC/TSA family
SCOP207 1-135 -68.900 28  d3or5a_ c.47.1.0 (A:) automated matches {Chlorobaculum tepidum [TaxId: 1097]}
VFDB 1-135 -36.700 11  [R] COG3054 Predicted transcriptional regulator
7 gi|15675955|ref|NP_273073.1| ABC transporter ATP-binding protein (NMB0007) [Neisseria meningitidis MC58] 216 COG1018 1-216 -98.100 41  [D] COG2884 Predicted ATPase involved in cell division
CSGID 1-216 -102.000 50  IDP00547 gene: ftsE; cell division protein FtsE YPO3813 [Yersinia pestis CO92]
H.sapiens 2-215 -54.200 22  sp|Q86UQ4|ABCAD_HUMAN ATP-binding cassette sub-family A member 13 OS=Homo sapiens GN=ABCA13 PE=2 SV=2 (Range: 4651-4950)
HGM_OVER 30-189 -2.980 PB005684 gi|160884252|ref|ZP_02065255.1| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]gi|156109991|gb|EDO11736.1| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]
NEW_HUMAN_DOMAINS 22-45 -7.140 16  sp|Q6P2S7|GNN_HUMAN Tetratricopeptide repeat protein GNN OS=Homo sapiens GN=GNN PE=2 SV=3 (Range: 217-335)
PDB1018 1-216 -94.900 35  5xu1_A mol:protein length:245 ABC transporter ATP-binding protein
PfamA32U 14-215 -33.200 12  PF09818.9; Q10V01_TRIEI/4-493; Predicted ATPase of the ABC class
18-166 -45.000 28  PF00005.27; YTFR_ECOLI/25-174; ABC transporter
SCOP207 1-216 -94.700 36  d2pcja_ c.37.1.0 (A:) automated matches {Aquifex aeolicus [TaxId: 224324]}
VFDB 1-216 -98.100 41  [D] COG2884 Predicted ATPase involved in cell division
8 gi|15675956|ref|NP_273074.1| putative cell division protein FtsX (NMB0008) [Neisseria meningitidis MC58] 305 COG1018 2-304 -92.500 26  [D] COG2177 Cell division protein
CSGID 7-299 -89.300 24  IDP91938 cell division ABC transporter, permease protein FtsX [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100009513 [Streptococcus pneumoniae str. Canada MDR_19A]
H.sapiens 1-243 -10.400 sp|Q8IUA7|ABCA9_HUMAN ATP-binding cassette sub-family A member 9 OS=Homo sapiens GN=ABCA9 PE=1 SV=1 (Range: 1-300)
HGM_OVER 37-206 -4.210 PB007740 Q89YT2_BACTN/1-193 PB007740; Pfam-B_7740;
NEW_HUMAN_DOMAINS 51-126 -5.400 10  sp|Q96PP4|TSG13_HUMAN Testis-specific gene 13 protein OS=Homo sapiens GN=TSGA13 PE=1 SV=1 (Range: 30-120)
PDB1018 14-303 -18.600 14  5xu1_M mol:protein length:419 ABC transporter permeae
50-161 -35.200 11  4n8n_A mol:protein length:115 Cell division protein FtsX
PfamA32U 64-156 -32.600 17  PF18075.1; A0A0G0SNI0_9BACT/62-154; FtsX extracellular domain
205-296 -12.100 13  PF02687.21; Q7V1V4_PROMP/299-384; FtsX-like permease family
SCOP207 76-206 -6.280 d1n1fa_ a.26.1.3 (A:) Interleukin-19 {Human (Homo sapiens) [TaxId: 9606]}
VFDB 2-304 -92.500 26  [D] COG2177 Cell division protein
9 gi|15675957|ref|NP_273075.1| BolA/YrbA family protein (NMB0009) [Neisseria meningitidis MC58] 82 COG1018 2-82 -50.000 28  [K] COG5007 Predicted transcriptional regulator, BolA superfamily
CSGID 2-82 -42.700 32  IDP01322 bolA protein VC2296 [Vibrio cholerae O1 biovar El Tor str. N16961]
H.sapiens 2-82 -43.300 34  sp|Q9H3K6|BOLA2_HUMAN BolA-like protein 2 OS=Homo sapiens GN=BOLA2 PE=1 SV=1
HGM_OVER 36-80 -2.680 11  PB027498 Q7MTK6_PORGI/1-146 PB027498; Pfam-B_27498;
NEW_HUMAN_DOMAINS 7-80 -5.760 13  sp|O75717|WDHD1_HUMAN WD repeat and HMG-box DNA-binding protein 1 OS=Homo sapiens GN=WDHD1 PE=1 SV=1 (Range: 441-531)
PDB1018 2-82 -50.200 28  1ny8_A mol:protein length:97 Protein yrbA
PfamA32U 2-76 -42.700 33  PF01722.18; G4T8V3_SERID/11-92; BolA-like protein
SCOP207 2-82 -50.000 28  d1ny8a1 d.52.6.1 (A:1-89) Hypothetical protein YrbA {Escherichia coli [TaxId: 562]}
VFDB 2-82 -50.000 28  [K] COG5007 Predicted transcriptional regulator, BolA superfamily
10 gi|15675958|ref|NP_273076.1| phosphoglycerate kinase (NMB0010) [Neisseria meningitidis MC58] 403 COG1018 1-403 -107.000 58  [G] COG0126 3-phosphoglycerate kinase
CSGID 1-403 -113.000 57  IDP02760 gene: pgk; phosphogylcerate kinase [Francisella tularensis subsp. tularensis SCHU S4] FTT1367c [Francisella tularensis subsp. tularensis SCHU S4]
H.sapiens 2-400 -98.600 40  sp|P00558|PGK1_HUMAN Phosphoglycerate kinase 1 OS=Homo sapiens GN=PGK1 PE=1 SV=3
HGM_OVER 44-259 -3.250 13  PB002776 gi|157737147|ref|YP_001489830.1| hypothetical protein Abu_0901 [Arcobacter butzleri RM4018]gi|157699001|gb|ABV67161.1| hypothetical protein Abu_0901 [Arcobacter butzleri RM4018]
NEW_HUMAN_DOMAINS 306-360 -5.850 18  sp|Q5MNZ6|WIPI3_HUMAN WD repeat domain phosphoinositide-interacting protein 3 OS=Homo sapiens GN=WDR45L PE=2 SV=2 (Range: 1-78)
PDB1018 1-402 -114.000 58  5bt8_A mol:protein length:403 Phosphoglycerate kinase
PfamA32U 10-390 -107.000 45  PF00162.19; K9V4L4_9CYAN/12-388; Phosphoglycerate kinase
SCOP207 2-403 -107.000 59  d1zmra_ c.86.1.1 (A:) Phosphoglycerate kinase {Escherichia coli [TaxId: 562]}
VFDB 1-403 -107.000 58  [G] COG0126 3-phosphoglycerate kinase
11 gi|15675959|ref|NP_273077.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase (NMB0011) [Neisseria meningitidis MC58] 417 COG1018 1-417 -89.400 58  [M] COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase
CSGID 1-416 -92.900 46  IDP00022 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 (Enoylpyruvate transferase 2) (UDP-N-acetylglucosamine enolpyruvyl transferase 2) (EPT 2) BA_5578 [Bacillus anthracis str. Ames]
H.sapiens 131-416 -8.220 10  sp|O75762|TRPA1_HUMAN Transient receptor potential cation channel subfamily A member 1 OS=Homo sapiens GN=TRPA1 PE=2 SV=3 (Range: 151-450)
HGM_OVER 274-416 -2.860 15  HGC00816 gi|163609134|dbj|BABG01026932.1|1.0 TMP01075;
NEW_HUMAN_DOMAINS 380-416 -4.140 13  tr|F8WA61|F8WA61_HUMAN Uncharacterized protein OS=Homo sapiens GN=KIF9 PE=3 SV=1 (Range: 493-567)
PDB1018 1-417 -92.800 58  6cn1_A mol:protein length:424 UDP-N-acetylglucosamine 1-carboxyvinyltransferase
PfamA32U 6-405 -86.700 59  PF00275.20; MURA_ECOLI/6-406; EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
SCOP207 1-416 -90.000 60  d5u4ha1 d.68.2.0 (A:1-418) automated matches {Acinetobacter baumannii [TaxId: 470]}
VFDB 1-417 -89.400 58  [M] COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase
12 gi|15675960|ref|NP_273078.1| hypothetical protein (NMB0012) [Neisseria meningitidis MC58] 323 COG1018 40-323 -51.200 18  [S] COG2899 Uncharacterized protein conserved in bacteria
72-315 -66.200 13  [P] COG0861 Membrane protein TerC, possibly involved in tellurium resistance
CSGID 45-314 -18.300 12  IDP95135 putative transmembrane protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] YP_002920370 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
H.sapiens 82-291 -15.200 13  sp|Q9HC07|TM165_HUMAN(removed signalp:1-33) Transmembrane protein 165 OS=Homo sapiens GN=TMEM165 PE=1 SV=1
HGM_OVER 90-238 -3.990 11  PB038151 Q8A4A5_BACTN/1-178 PB038151; Pfam-B_38151;
NEW_HUMAN_DOMAINS 90-120 -4.590 tr|E7EUG5|E7EUG5_HUMAN Uncharacterized protein OS=Homo sapiens GN=THUMPD2 PE=4 SV=1 (Range: 1-85)
PDB1018 83-315 -5.510 13  4l6r_A mol:protein length:425 Soluble cytochrome b562 and Glucagon receptor chimera
PfamA32U 85-286 -87.100 50  PF03741.16; Q8EG61_SHEON/77-283; Integral membrane protein TerC family
97-321 -36.400 23  PF04332.15; Q9RSA1_DEIRA/56-346; Protein of unknown function (DUF475 topsan)
SCOP207 85-277 -5.720 10  d1pb7a_ c.94.1.1 (A:) N-methyl-D-aspartate receptor subunit 1 {Norway rat (Rattus norvegicus) [TaxId: 10116]}
VFDB 40-323 -51.200 18  [S] COG2899 Uncharacterized protein conserved in bacteria
72-315 -66.200 13  [P] COG0861 Membrane protein TerC, possibly involved in tellurium resistance
13 gi|15675961|ref|NP_273079.1| hypothetical protein (NMB0013) [Neisseria meningitidis MC58] 149 COG1018 2-147 -69.700 26  [S] COG3399 Uncharacterized protein conserved in bacteria
CSGID 7-110 -6.260 10  IDP04529 gene: acrD; aminoglycoside/multidrug efflux system [Salmonella typhimurium LT2] STM2481_1_1037 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
H.sapiens 1-149 -11.500 13  sp|Q96Q45|AL2S4_HUMAN Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 4 protein OS=Homo sapiens GN=ALS2CR4 PE=1 SV=1
HGM_OVER 43-145 -6.620 PB001708 Q3IRP6_NATPD/1-505 PB001708; Pfam-B_1708;
NEW_HUMAN_DOMAINS 13-148 -5.890 sp|Q53T94|TAF1B_HUMAN TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Homo sapiens GN=TAF1B PE=1 SV=1 (Range: 212-452)
PDB1018 37-145 -8.330 4gd3_A mol:protein length:235 Ni/Fe-hydrogenase 1 B-type cytochrome subunit
PfamA32U 1-141 -19.300 PF03653.13; Q9A210_CAUVC/4-152; Uncharacterised protein family (UPF0093 topsan)
SCOP207 6-127 -5.780 13  d1kqfc_ f.21.1.1 (C:) Formate dehydrogenase N, cytochrome (gamma) subunit {Escherichia coli [TaxId: 562]}
VFDB 2-147 -69.700 26  [S] COG3399 Uncharacterized protein conserved in bacteria
14 gi|15675962|ref|NP_273080.1| 3-deoxy-D-manno-octulosonic-acid transferase (NMB0014) [Neisseria meningitidis MC58] 423 COG1018 1-420 -102.000 32  [M] COG1519 3-deoxy-D-manno-octulosonic-acid transferase
CSGID 2-422 -104.000 34  IDP95140 3-deoxy-D-manno-octulosonic-acid transferase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] YP_001337624 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
H.sapiens 16-418 -10.200 11  sp|Q2TAA5|ALG11_HUMAN(removed signalp:1-32) Asparagine-linked glycosylation protein 11 homolog OS=Homo sapiens GN=ALG11 PE=1 SV=2
47-420 -12.600 10  sp|Q9BT22|ALG1_HUMAN(removed signalp:1-31) Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Homo sapiens GN=ALG1 PE=1 SV=2
83-422 -16.400 sp|Q96MS3|GL1D1_HUMAN(removed signalp:1-16) Glycosyltransferase 1 domain-containing protein 1 OS=Homo sapiens GN=GLT1D1 PE=2 SV=2
HGM_OVER 90-422 -3.050 PB022815 A4DEQ0_LISMO/1-452 PB022815; Pfam-B_22815;
NEW_HUMAN_DOMAINS 121-204 -6.460 18  tr|C9JKX0|C9JKX0_HUMAN Uncharacterized protein OS=Homo sapiens GN=KIAA0430 PE=4 SV=1 (Range: 1-169)
PDB1018 21-413 -85.700 22  2xci_A mol:protein length:374 3-DEOXY-D-MANNO-2-OCTULOSONIC ACID TRANSFERASE
PfamA32U 33-208 -70.800 39  PF04413.16; B3PCK7_CELJU/37-215; 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
51-418 -14.700 14  PF04007.12; O26874_METTH/16-355; Protein of unknown function (DUF354 topsan)
SCOP207 59-420 -15.300 12  d2iw1a_ c.87.1.8 (A:) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]}
VFDB 1-420 -102.000 32  [M] COG1519 3-deoxy-D-manno-octulosonic-acid transferase
15 gi|15675963|ref|NP_273081.1| 6-phosphogluconate dehydrogenase (NMB0015) [Neisseria meningitidis MC58] 482 COG1018 1-482 -122.000 82  [G] COG0362 6-phosphogluconate dehydrogenase
CSGID 2-472 -113.000 52  IDP06299 6-phosphogluconate dehydrogenase [Streptococcus pneumoniae TIGR4] NP_344902 [Streptococcus pneumoniae TIGR4]
H.sapiens 1-482 -115.000 62  sp|P52209|6PGD_HUMAN 6-phosphogluconate dehydrogenase, decarboxylating OS=Homo sapiens GN=PGD PE=1 SV=3
HGM_OVER 1-163 -3.160 10  PB046158 _JGI.0336690_ 2004028347 [Human Gut Community Subject 8]
NEW_HUMAN_DOMAINS 96-362 -7.900 14  sp|Q9NZQ8|TRPM5_HUMAN Transient receptor potential cation channel subfamily M member 5 OS=Homo sapiens GN=TRPM5 PE=1 SV=1 (Range: 174-435)
PDB1018 1-482 -123.000 62  1pgn_A mol:protein length:482 6-PHOSPHOGLUCONATE DEHYDROGENASE
PfamA32U 4-174 -64.700 51  PF03446.15; Q8FTI1_COREF/15-184; NAD binding domain of 6-phosphogluconate dehydrogenase
179-468 -77.300 51  PF00393.19; K8GH81_9CYAN/178-467; 6-phosphogluconate dehydrogenase, C-terminal domain
SCOP207 1-176 -67.100 65  d4gwga1 c.2.1.0 (A:1-176) automated matches {Human (Homo sapiens) [TaxId: 9606]}
177-469 -79.700 61  d4gwga2 a.100.1.1 (A:177-469) automated matches {Human (Homo sapiens) [TaxId: 9606]}
VFDB 1-482 -122.000 82  [G] COG0362 6-phosphogluconate dehydrogenase
16 gi|15675964|ref|NP_273082.1| hypothetical protein (NMB0016) [Neisseria meningitidis MC58] 78 COG1018 16-73 -6.280 12  [O] COG2999 Glutaredoxin 2
CSGID 7-62 -7.280 23  IDP06124 hypothetical protein jhp0592 [Helicobacter pylori J99] NP_223310 [Helicobacter pylori J99]
H.sapiens 1-71 -6.890 25  sp|Q9Y4G2|PKHM1_HUMAN Pleckstrin homology domain-containing family M member 1 OS=Homo sapiens GN=PLEKHM1 PE=1 SV=3 (Range: 301-600)
HGM_OVER 45-75 -2.900 29  HGC00311 gi|163635536|dbj|BABG01000737.1|2.0 TMP00178;
NEW_HUMAN_DOMAINS 24-70 -5.780 17  sp|Q9H1P6|CT085_HUMAN Uncharacterized protein C20orf85 OS=Homo sapiens GN=C20orf85 PE=2 SV=1 (Range: 73-137)
PDB1018 13-73 -7.370 13  3ir4_A mol:protein length:218 Glutaredoxin 2
PfamA32U 19-69 -7.250 21  PF16239.5; Q97WR8_SULSO/16-95; Domain of unknown function (DUF4898 topsan)
SCOP207 11-67 -6.490 21  d2gtta1 a.260.1.1 (A:6-448) Nucleoprotein {Rabies virus [TaxId: 11292]}
VFDB 16-73 -6.280 12  [O] COG2999 Glutaredoxin 2
17 gi|15675965|ref|NP_273083.1| UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (NMB0017) [Neisseria meningitidis MC58] 307 COG1018 2-305 -112.000 51  [M] COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase
CSGID 1-305 -115.000 49  IDP00307 gene: lpxC; UDP-3-0-acyl N-acetylglucosamine deacetylase CBU_0142 [Coxiella burnetii RSA 493]
H.sapiens 11-284 -7.210 sp|O60229|KALRN_HUMAN(removed signalp:1-25) Kalirin OS=Homo sapiens GN=KALRN PE=1 SV=2 (Range: 2401-2700)
HGM_OVER 5-164 -2.430 16  PB000119 Q6KIT1_MYCMO/1-381 PB000119; Pfam-B_119;
NEW_HUMAN_DOMAINS 92-226 -4.850 12  tr|F5GY20|F5GY20_HUMAN Uncharacterized protein OS=Homo sapiens GN=GPNMB PE=4 SV=1 (Range: 52-191)
PDB1018 1-306 -115.000 48  4mdt_A mol:protein length:305 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
PfamA32U 3-278 -112.000 57  PF03331.13; D5CP16_SIDLE/4-276; UDP-3-O-acyl N-acetylglycosamine deacetylase
SCOP207 2-134 -59.500 32  d4u3da1 d.14.1.7 (A:2-127) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC {Aquifex aeolicus [TaxId: 63363]}
135-281 -69.600 38  d4u3da2 d.14.1.7 (A:128-268) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC {Aquifex aeolicus [TaxId: 63363]}
VFDB 2-305 -112.000 51  [M] COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase
18 gi|15675966|ref|NP_273084.1|(removed signalp:1-27) pilin PilE (NMB0018) [Neisseria meningitidis MC58] 143 COG1018 1-143 -42.800 85  [NU] COG4969 Tfp pilus assembly protein, major pilin PilA
CSGID 1-143 -24.800 12  IDP01460 fimbrial protein VC2423 [Vibrio cholerae O1 biovar El Tor str. N16961]
H.sapiens 1-36 -8.070 19  sp|Q8WW14|CJ082_HUMAN Uncharacterized protein C10orf82 OS=Homo sapiens GN=C10orf82 PE=2 SV=2
HGM_OVER 1-29 -6.890 13  PB067216 JCVI_PEP_1096676511767 /source_dna_id=JCVI_ORF_1096676511766 /offset=0 /translation_table=11 /length=256 /full_length=256
NEW_HUMAN_DOMAINS 1-31 -10.000 22  sp|Q8WW14|CJ082_HUMAN Uncharacterized protein C10orf82 OS=Homo sapiens GN=C10orf82 PE=2 SV=2 (Range: 69-138)
PDB1018 2-143 -79.000 99  4v1j_A mol:protein length:142 FIMBRIAL PROTEIN
PfamA32U 9-136 -35.700 12  PF00114.19; Q60163_MORBO/35-157; Pilin (bacterial filament)
SCOP207 9-143 -49.100 33  d1qvea1 d.24.1.1 (A:29-150) Pilin P1 {Pseudomonas aeruginosa [TaxId: 287]}
VFDB 1-143 -42.800 85  [NU] COG4969 Tfp pilus assembly protein, major pilin PilA
19 gi|77358699|ref|YP_338284.1| pilS cassette (NMB0019) [Neisseria meningitidis MC58] 136 COG1018 1-123 -28.000 75  [NU] COG4969 Tfp pilus assembly protein, major pilin PilA
CSGID 2-121 -10.500 12  IDP01460 fimbrial protein VC2423 [Vibrio cholerae O1 biovar El Tor str. N16961]
H.sapiens 1-127 -8.680 11  sp|Q86X10|RLGPB_HUMAN Ral GTPase-activating protein subunit beta OS=Homo sapiens GN=RALGAPB PE=1 SV=1 (Range: 751-1050)
HGM_OVER 1-67 -4.700 11  PB128892 A6TNK2_9CLOT/1-174 PB128892; Pfam-B_128892;
NEW_HUMAN_DOMAINS 3-83 -8.760 13  sp|Q86X10|RLGPB_HUMAN Ral GTPase-activating protein subunit beta OS=Homo sapiens GN=RALGAPB PE=1 SV=1 (Range: 896-990)
PDB1018 1-123 -62.900 78  5jw8_A mol:protein length:137 Major pilin PilE
PfamA32U 1-116 -28.800 15  PF00114.19; Q60163_MORBO/35-157; Pilin (bacterial filament)
SCOP207 1-124 -42.400 28  d1qvea1 d.24.1.1 (A:29-150) Pilin P1 {Pseudomonas aeruginosa [TaxId: 287]}
VFDB 1-123 -28.000 75  [NU] COG4969 Tfp pilus assembly protein, major pilin PilA
20 gi|77358700|ref|YP_338285.1| pilS cassette (NMB0020) [Neisseria meningitidis MC58] 124 COG1018 1-123 -28.900 77  [NU] COG4969 Tfp pilus assembly protein, major pilin PilA
CSGID 2-123 -11.900 10  IDP01460 fimbrial protein VC2423 [Vibrio cholerae O1 biovar El Tor str. N16961]
H.sapiens 1-124 -9.390 12  sp|Q86X10|RLGPB_HUMAN Ral GTPase-activating protein subunit beta OS=Homo sapiens GN=RALGAPB PE=1 SV=1 (Range: 751-1050)
HGM_OVER 1-67 -5.120 14  PB128892 A6TNK2_9CLOT/1-174 PB128892; Pfam-B_128892;
NEW_HUMAN_DOMAINS 3-83 -8.580 13  sp|Q86X10|RLGPB_HUMAN Ral GTPase-activating protein subunit beta OS=Homo sapiens GN=RALGAPB PE=1 SV=1 (Range: 896-990)
PDB1018 1-123 -64.900 68  5jw8_A mol:protein length:137 Major pilin PilE
PfamA32U 1-116 -29.500 12  PF00114.19; Q60163_MORBO/35-157; Pilin (bacterial filament)
SCOP207 1-123 -44.000 29  d1qvea1 d.24.1.1 (A:29-150) Pilin P1 {Pseudomonas aeruginosa [TaxId: 287]}
VFDB 1-123 -28.900 77  [NU] COG4969 Tfp pilus assembly protein, major pilin PilA


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Li W, Godzik A. In search for more accurate alignments in the twilight zone. Protein Sci. 2002 Jul;11(7):1702-13.