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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 2171next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|15675949|ref|NP_273067.1| putative acetyltransferase (NMB0001) [Neisseria meningitidis MC58] 163 PDB1018 6-162 -48.900 16  5wjd_A mol:protein length:159 CG8481, isoform B
2 gi|15675950|ref|NP_273068.1|(removed signalp:1-36) hypothetical protein (NMB0002) [Neisseria meningitidis MC58] 95 PDB1018 3-72 -11.200 11  6a9p_A mol:protein length:106 Glial fibrillary acidic protein
3 gi|15675951|ref|NP_273069.1| glutamyl-tRNA synthetase (NMB0003) [Neisseria meningitidis MC58] 464 PDB1018 1-464 -133.000 51  4g6z_A mol:protein length:490 Glutamate-tRNA ligase
4 gi|15675952|ref|NP_273070.1|(removed signalp:1-37) EpiH/GdmH-related protein (NMB0004) [Neisseria meningitidis MC58] 177 PDB1018 10-141 -34.300 16  3ca8_A mol:protein length:266 Protein ydcF
5 gi|15675953|ref|NP_273071.1| arsenate reductase (NMB0005) [Neisseria meningitidis MC58] 117 PDB1018 1-117 -66.200 52  3rdw_A mol:protein length:121 Putative arsenate reductase
6 gi|15675954|ref|NP_273072.1|(removed signalp:1-22) thioredoxin-related protein (NMB0006) [Neisseria meningitidis MC58] 138 PDB1018 1-138 -74.900 100  3raz_A mol:protein length:151 Thioredoxin-related protein
7 gi|15675955|ref|NP_273073.1| ABC transporter ATP-binding protein (NMB0007) [Neisseria meningitidis MC58] 216 PDB1018 1-216 -94.900 35  5xu1_A mol:protein length:245 ABC transporter ATP-binding protein
8 gi|15675956|ref|NP_273074.1| putative cell division protein FtsX (NMB0008) [Neisseria meningitidis MC58] 305 PDB1018 14-303 -18.600 14  5xu1_M mol:protein length:419 ABC transporter permeae
50-161 -35.200 11  4n8n_A mol:protein length:115 Cell division protein FtsX
9 gi|15675957|ref|NP_273075.1| BolA/YrbA family protein (NMB0009) [Neisseria meningitidis MC58] 82 PDB1018 2-82 -50.200 28  1ny8_A mol:protein length:97 Protein yrbA
10 gi|15675958|ref|NP_273076.1| phosphoglycerate kinase (NMB0010) [Neisseria meningitidis MC58] 403 PDB1018 1-402 -114.000 58  5bt8_A mol:protein length:403 Phosphoglycerate kinase
11 gi|15675959|ref|NP_273077.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase (NMB0011) [Neisseria meningitidis MC58] 417 PDB1018 1-417 -92.800 58  6cn1_A mol:protein length:424 UDP-N-acetylglucosamine 1-carboxyvinyltransferase
12 gi|15675960|ref|NP_273078.1| hypothetical protein (NMB0012) [Neisseria meningitidis MC58] 323 PDB1018 83-315 -5.510 13  4l6r_A mol:protein length:425 Soluble cytochrome b562 and Glucagon receptor chimera
13 gi|15675961|ref|NP_273079.1| hypothetical protein (NMB0013) [Neisseria meningitidis MC58] 149 PDB1018 37-145 -8.330 4gd3_A mol:protein length:235 Ni/Fe-hydrogenase 1 B-type cytochrome subunit
14 gi|15675962|ref|NP_273080.1| 3-deoxy-D-manno-octulosonic-acid transferase (NMB0014) [Neisseria meningitidis MC58] 423 PDB1018 21-413 -85.700 22  2xci_A mol:protein length:374 3-DEOXY-D-MANNO-2-OCTULOSONIC ACID TRANSFERASE
15 gi|15675963|ref|NP_273081.1| 6-phosphogluconate dehydrogenase (NMB0015) [Neisseria meningitidis MC58] 482 PDB1018 1-482 -123.000 62  1pgn_A mol:protein length:482 6-PHOSPHOGLUCONATE DEHYDROGENASE
16 gi|15675964|ref|NP_273082.1| hypothetical protein (NMB0016) [Neisseria meningitidis MC58] 78 PDB1018 13-73 -7.370 13  3ir4_A mol:protein length:218 Glutaredoxin 2
17 gi|15675965|ref|NP_273083.1| UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (NMB0017) [Neisseria meningitidis MC58] 307 PDB1018 1-306 -115.000 48  4mdt_A mol:protein length:305 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
18 gi|15675966|ref|NP_273084.1|(removed signalp:1-27) pilin PilE (NMB0018) [Neisseria meningitidis MC58] 143 PDB1018 2-143 -79.000 99  4v1j_A mol:protein length:142 FIMBRIAL PROTEIN
19 gi|77358699|ref|YP_338284.1| pilS cassette (NMB0019) [Neisseria meningitidis MC58] 136 PDB1018 1-123 -62.900 78  5jw8_A mol:protein length:137 Major pilin PilE
20 gi|77358700|ref|YP_338285.1| pilS cassette (NMB0020) [Neisseria meningitidis MC58] 124 PDB1018 1-123 -64.900 68  5jw8_A mol:protein length:137 Major pilin PilE

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Rychlewski L, Zhang B, Godzik A. Fold predictions for bacterial genomes. J Struct Biol. 2001 May-Jun;134(2-3):219-31. Review.