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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 2171next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|15675949|ref|NP_273067.1| putative acetyltransferase (NMB0001) [Neisseria meningitidis MC58] 163 VFDB 5-161 -36.200 15  [E] COG1246 N-acetylglutamate synthase and related acetyltransferases
2 gi|15675950|ref|NP_273068.1|(removed signalp:1-36) hypothetical protein (NMB0002) [Neisseria meningitidis MC58] 95 VFDB 4-90 -9.080 12  [S] COG3883 Uncharacterized protein conserved in bacteria
3 gi|15675951|ref|NP_273069.1| glutamyl-tRNA synthetase (NMB0003) [Neisseria meningitidis MC58] 464 VFDB 1-464 -129.000 31  [J] KOG1149 Glutamyl-tRNA synthetase (mitochondrial)
4 gi|15675952|ref|NP_273070.1|(removed signalp:1-37) EpiH/GdmH-related protein (NMB0004) [Neisseria meningitidis MC58] 177 VFDB 3-168 -51.200 20  [S] COG2949 Uncharacterized membrane protein
5 gi|15675953|ref|NP_273071.1| arsenate reductase (NMB0005) [Neisseria meningitidis MC58] 117 VFDB 4-117 -57.200 24  [P] COG1393 Arsenate reductase and related proteins, glutaredoxin family
6 gi|15675954|ref|NP_273072.1|(removed signalp:1-22) thioredoxin-related protein (NMB0006) [Neisseria meningitidis MC58] 138 VFDB 1-135 -36.700 11  [R] COG3054 Predicted transcriptional regulator
7 gi|15675955|ref|NP_273073.1| ABC transporter ATP-binding protein (NMB0007) [Neisseria meningitidis MC58] 216 VFDB 1-216 -98.100 41  [D] COG2884 Predicted ATPase involved in cell division
8 gi|15675956|ref|NP_273074.1| putative cell division protein FtsX (NMB0008) [Neisseria meningitidis MC58] 305 VFDB 2-304 -92.500 26  [D] COG2177 Cell division protein
9 gi|15675957|ref|NP_273075.1| BolA/YrbA family protein (NMB0009) [Neisseria meningitidis MC58] 82 VFDB 2-82 -50.000 28  [K] COG5007 Predicted transcriptional regulator, BolA superfamily
10 gi|15675958|ref|NP_273076.1| phosphoglycerate kinase (NMB0010) [Neisseria meningitidis MC58] 403 VFDB 1-403 -107.000 58  [G] COG0126 3-phosphoglycerate kinase
11 gi|15675959|ref|NP_273077.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase (NMB0011) [Neisseria meningitidis MC58] 417 VFDB 1-417 -89.400 58  [M] COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase
12 gi|15675960|ref|NP_273078.1| hypothetical protein (NMB0012) [Neisseria meningitidis MC58] 323 VFDB 40-323 -51.200 18  [S] COG2899 Uncharacterized protein conserved in bacteria
72-315 -66.200 13  [P] COG0861 Membrane protein TerC, possibly involved in tellurium resistance
13 gi|15675961|ref|NP_273079.1| hypothetical protein (NMB0013) [Neisseria meningitidis MC58] 149 VFDB 2-147 -69.700 26  [S] COG3399 Uncharacterized protein conserved in bacteria
14 gi|15675962|ref|NP_273080.1| 3-deoxy-D-manno-octulosonic-acid transferase (NMB0014) [Neisseria meningitidis MC58] 423 VFDB 1-420 -102.000 32  [M] COG1519 3-deoxy-D-manno-octulosonic-acid transferase
15 gi|15675963|ref|NP_273081.1| 6-phosphogluconate dehydrogenase (NMB0015) [Neisseria meningitidis MC58] 482 VFDB 1-482 -122.000 82  [G] COG0362 6-phosphogluconate dehydrogenase
16 gi|15675964|ref|NP_273082.1| hypothetical protein (NMB0016) [Neisseria meningitidis MC58] 78 VFDB 16-73 -6.280 12  [O] COG2999 Glutaredoxin 2
17 gi|15675965|ref|NP_273083.1| UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (NMB0017) [Neisseria meningitidis MC58] 307 VFDB 2-305 -112.000 51  [M] COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase
18 gi|15675966|ref|NP_273084.1|(removed signalp:1-27) pilin PilE (NMB0018) [Neisseria meningitidis MC58] 143 VFDB 1-143 -42.800 85  [NU] COG4969 Tfp pilus assembly protein, major pilin PilA
19 gi|77358699|ref|YP_338284.1| pilS cassette (NMB0019) [Neisseria meningitidis MC58] 136 VFDB 1-123 -28.000 75  [NU] COG4969 Tfp pilus assembly protein, major pilin PilA
20 gi|77358700|ref|YP_338285.1| pilS cassette (NMB0020) [Neisseria meningitidis MC58] 124 VFDB 1-123 -28.900 77  [NU] COG4969 Tfp pilus assembly protein, major pilin PilA

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Lukasz Jaroszewski, Zhanwen Li, S. Sri Krishna, Constantina Bakolitsa, John Wooley, Ashley M. Deacon, Ian A. Wilson, Adam Godzik, Exploration of Uncharted Regions of the Protein Universe. Plos Biology. 2009 Sep. 7(9):e1000205