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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 7012next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 sp|A0AUZ9|CB067_HUMAN Uncharacterized protein C2orf67 OS=Homo sapiens GN=C2orf67 PE=1 SV=2 (Range: 142-330) 189 CSGID 13-189 -6.510 IDP91521 C2 domain-containing protein [Toxoplasma gondii ME49] TGME49_040910 [Toxoplasma gondii ME49]
2 sp|A0AUZ9|CB067_HUMAN Uncharacterized protein C2orf67 OS=Homo sapiens GN=C2orf67 PE=1 SV=2 (Range: 362-412) 51 CSGID 11-51 -5.250 12  IDP90335 hypothetical protein [Chlamydia trachomatis D/UW-3/CX] CT_652.1 [Chlamydia trachomatis D/UW-3/CX]
3 sp|A0AVF1|TTC26_HUMAN Tetratricopeptide repeat protein 26 OS=Homo sapiens GN=TTC26 PE=2 SV=1 (Range: 486-554) 69 CSGID 13-68 -6.010 17  IDP02222 heme-degrading monooxygenase IsdG [Listeria monocytogenes EGD-e] lmo0484 [Listeria monocytogenes EGD-e]
4 tr|A0AVG2|A0AVG2_HUMAN TRPM8 protein OS=Homo sapiens GN=TRPM8 PE=2 SV=1 (Range: 1-215) 215 CSGID 9-173 -5.760 IDP90121 ankyrin-like protein [Monkeypox virus] MPXV_ZAI1979_005_031 [Monkeypox virus]
5 tr|A0AVG2|A0AVG2_HUMAN TRPM8 protein OS=Homo sapiens GN=TRPM8 PE=2 SV=1 (Range: 240-290) 51 CSGID 22-51 -4.420 16  IDP01876 gene: secE; preprotein translocase subunit SecE [Bacillus anthracis str. `Ames Ancestor`] GBAA0095 [Bacillus anthracis str. `Ames Ancestor`]
6 tr|A0AVG2|A0AVG2_HUMAN TRPM8 protein OS=Homo sapiens GN=TRPM8 PE=2 SV=1 (Range: 311-360) 50 CSGID 3-50 -3.490 10  IDP05724 ribonuclease [Bacillus anthracis str. Ames] BA_3370 [Bacillus anthracis str. Ames]
7 sp|A0AVI2|FR1L5_HUMAN Fer-1-like protein 5 OS=Homo sapiens GN=FER1L5 PE=2 SV=2 (Range: 431-614) 184 CSGID 16-172 -5.660 IDP90372 hypothetical protein [Chlamydia trachomatis D/UW-3/CX] CT_253 [Chlamydia trachomatis D/UW-3/CX]
8 sp|A0AVI2|FR1L5_HUMAN Fer-1-like protein 5 OS=Homo sapiens GN=FER1L5 PE=2 SV=2 (Range: 1641-1750) 110 CSGID 38-86 -8.710 20  IDP00115 gene: VPA0551; hypothetical protein VPA0551 (gi 28900406) NT01VPA0514 [Vibrio parahaemolyticus RIMD 2210633]
9 sp|A0AVI2|FR1L5_HUMAN Fer-1-like protein 5 OS=Homo sapiens GN=FER1L5 PE=2 SV=2 (Range: 2018-2093) 76 CSGID 5-67 -4.960 20  IDP91622 gene: ECs2227; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB35650 [Escherichia coli O157:H7 str. Sakai]
10 sp|A0AVK6|E2F8_HUMAN Transcription factor E2F8 OS=Homo sapiens GN=E2F8 PE=1 SV=1 (Range: 470-543) 74 CSGID 25-65 -5.090 17  IDP91998 bacteriocin, lactococcin 972 family protein [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100004262 [Streptococcus pneumoniae str. Canada MDR_19A]
11 sp|A0JNW5|UH1BL_HUMAN UHRF1-binding protein 1-like OS=Homo sapiens GN=UHRF1BP1L PE=1 SV=2 (Range: 117-259) 143 CSGID 3-113 -6.140 IDP05048 conserved hypothetical protein [Bacillus anthracis str. Ames] BA_4771 [Bacillus anthracis str. Ames]
12 sp|A0JNW5|UH1BL_HUMAN UHRF1-binding protein 1-like OS=Homo sapiens GN=UHRF1BP1L PE=1 SV=2 (Range: 309-401) 93 CSGID 1-53 -5.770 15  IDP04101 gene: minE; cell division topological specificity factor MinE [Clostridium perfringens ATCC 13124] CPF_2392 [Clostridium perfringens ATCC 13124]
13 sp|A0JNW5|UH1BL_HUMAN UHRF1-binding protein 1-like OS=Homo sapiens GN=UHRF1BP1L PE=1 SV=2 (Range: 488-662) 175 CSGID 16-119 -5.040 10  IDP06005 histone H2B, putative [Toxoplasma gondii ME49] EEB03170 [Toxoplasma gondii ME49]
14 sp|A0JNW5|UH1BL_HUMAN UHRF1-binding protein 1-like OS=Homo sapiens GN=UHRF1BP1L PE=1 SV=2 (Range: 1275-1361) 87 CSGID 34-87 -5.440 IDP95320 conserved hypothetical protein [Vibrio cholerae MAK 757] EFH77921 [Vibrio cholerae MAK 757]
15 sp|A0PJM3|GORL_HUMAN Putative exonuclease GOR-like protein OS=Homo sapiens GN=REXO1L2P PE=5 SV=2 (Range: 195-290) 96 CSGID 15-96 -5.820 12  IDP91908 hypothetical protein SpneCM_07251 [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100007251 [Streptococcus pneumoniae str. Canada MDR_19A]
16 sp|A0PJM3|GORL_HUMAN Putative exonuclease GOR-like protein OS=Homo sapiens GN=REXO1L2P PE=5 SV=2 (Range: 322-408) 87 CSGID 4-85 -7.250 13  IDP92720 hypothetical lipoprotein [Francisella tularensis subsp. tularensis SCHU S4] FTT0289c [Francisella tularensis subsp. tularensis SCHU S4]
17 sp|A0PJW6|TM223_HUMAN Transmembrane protein 223 OS=Homo sapiens GN=TMEM223 PE=1 SV=1 (Range: 119-202) 84 CSGID 60-84 -5.550 28  IDP04565 putative lipoprotein [Clostridium perfringens ATCC 13124] CPF_1805 [Clostridium perfringens ATCC 13124]
18 sp|A0PJX8|TMM82_HUMAN Transmembrane protein 82 OS=Homo sapiens GN=TMEM82 PE=2 SV=2 (Range: 97-285) 189 CSGID 2-184 -6.810 14  IDP06035 NMD3 protein [Toxoplasma gondii ME49] XP_002370958 [Toxoplasma gondii ME49]
19 sp|A0PJY2|FEZF1_HUMAN Fez family zinc finger protein 1 OS=Homo sapiens GN=FEZF1 PE=2 SV=1 (Range: 106-243) 138 CSGID 19-138 -7.500 11  IDP01516 gene: sspA; stringent starvation protein A VC0576 [Vibrio cholerae O1 biovar El Tor str. N16961]
20 sp|A0ZSE6|CC50C_HUMAN Cell cycle control protein 50C OS=Homo sapiens GN=TMEM30C PE=2 SV=2 (Range: 58-113) 56 CSGID 5-45 -6.260 24  IDP91321 hypothetical protein VV2_0305 [Vibrio vulnificus CMCP6] VV2_0305 [Vibrio vulnificus CMCP6]


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Godzik A., Rychlewski L. A support vector machine approach to the identification of phosphorylation sites. Cell Mol Biol Lett. 2005;10(1):73-89.