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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 7012next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 sp|A0AUZ9|CB067_HUMAN Uncharacterized protein C2orf67 OS=Homo sapiens GN=C2orf67 PE=1 SV=2 (Range: 142-330) 189 PDB1018 89-189 -7.520 11  6bh8_A mol:protein length:483 CAAX prenyl protease 1 homolog
2 sp|A0AUZ9|CB067_HUMAN Uncharacterized protein C2orf67 OS=Homo sapiens GN=C2orf67 PE=1 SV=2 (Range: 362-412) 51 PDB1018 11-42 -5.760 21  2ovc_A mol:protein length:33 Potassium voltage-gated channel subfamily KQT member 4
3 sp|A0AVF1|TTC26_HUMAN Tetratricopeptide repeat protein 26 OS=Homo sapiens GN=TTC26 PE=2 SV=1 (Range: 486-554) 69 PDB1018 10-69 -6.540 20  2yay_A mol:protein length:271 DUTPASE
4 tr|A0AVG2|A0AVG2_HUMAN TRPM8 protein OS=Homo sapiens GN=TRPM8 PE=2 SV=1 (Range: 1-215) 215 PDB1018 1-202 -45.500 31  6bqv_A mol:protein length:1218 Transient receptor potential cation channel subfamily M member 4
5 tr|A0AVG2|A0AVG2_HUMAN TRPM8 protein OS=Homo sapiens GN=TRPM8 PE=2 SV=1 (Range: 240-290) 51 PDB1018 1-51 -22.000 31  6bcj_B mol:protein length:1254 Transient receptor potential cation channel subfamily M member 4
6 tr|A0AVG2|A0AVG2_HUMAN TRPM8 protein OS=Homo sapiens GN=TRPM8 PE=2 SV=1 (Range: 311-360) 50 PDB1018 1-50 -22.400 42  6bcj_B mol:protein length:1254 Transient receptor potential cation channel subfamily M member 4
7 sp|A0AVI2|FR1L5_HUMAN Fer-1-like protein 5 OS=Homo sapiens GN=FER1L5 PE=2 SV=2 (Range: 431-614) 184 PDB1018 6-184 -7.450 5al7_A mol:protein length:219 SPINDLE ASSEMBLY ABNORMAL PROTEIN 6 HOMOLOG
8 sp|A0AVI2|FR1L5_HUMAN Fer-1-like protein 5 OS=Homo sapiens GN=FER1L5 PE=2 SV=2 (Range: 1641-1750) 110 PDB1018 1-66 -9.700 16  1whn_A mol:protein length:128 hypothetical protein RIKEN cDNA 2310016K04
9 sp|A0AVI2|FR1L5_HUMAN Fer-1-like protein 5 OS=Homo sapiens GN=FER1L5 PE=2 SV=2 (Range: 2018-2093) 76 PDB1018 1-56 -8.090 17  5fn8_A mol:protein length:190 RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE C
10 sp|A0AVK6|E2F8_HUMAN Transcription factor E2F8 OS=Homo sapiens GN=E2F8 PE=1 SV=1 (Range: 470-543) 74 PDB1018 21-72 -6.730 19  5m0j_D mol:protein length:328 SWI5-dependent HO expression protein 2,SWI5-dependent HO expression protein 3
11 sp|A0JNW5|UH1BL_HUMAN UHRF1-binding protein 1-like OS=Homo sapiens GN=UHRF1BP1L PE=1 SV=2 (Range: 117-259) 143 PDB1018 1-143 -11.900 14  6cbc_A mol:protein length:336 Vacuolar protein sorting-associated protein
12 sp|A0JNW5|UH1BL_HUMAN UHRF1-binding protein 1-like OS=Homo sapiens GN=UHRF1BP1L PE=1 SV=2 (Range: 309-401) 93 PDB1018 17-93 -6.800 18  2yux_A mol:protein length:120 Myosin-binding protein C, slow-type
13 sp|A0JNW5|UH1BL_HUMAN UHRF1-binding protein 1-like OS=Homo sapiens GN=UHRF1BP1L PE=1 SV=2 (Range: 488-662) 175 PDB1018 1-158 -6.900 2zf3_A mol:protein length:194 Hypothetical protein VioE
14 sp|A0JNW5|UH1BL_HUMAN UHRF1-binding protein 1-like OS=Homo sapiens GN=UHRF1BP1L PE=1 SV=2 (Range: 1275-1361) 87 PDB1018 28-85 -7.530 24  4eag_B mol:protein length:85 5`-AMP-activated protein kinase subunit beta-1
15 sp|A0PJM3|GORL_HUMAN Putative exonuclease GOR-like protein OS=Homo sapiens GN=REXO1L2P PE=5 SV=2 (Range: 195-290) 96 PDB1018 3-78 -15.100 4d7x_A mol:protein length:86 MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15
16 sp|A0PJM3|GORL_HUMAN Putative exonuclease GOR-like protein OS=Homo sapiens GN=REXO1L2P PE=5 SV=2 (Range: 322-408) 87 PDB1018 1-59 -15.500 15  2xcm_E mol:protein length:74 RAR1
17 sp|A0PJW6|TM223_HUMAN Transmembrane protein 223 OS=Homo sapiens GN=TMEM223 PE=1 SV=1 (Range: 119-202) 84 PDB1018 2-68 -8.020 10  5yqr_A mol:protein length:276 Endolysin/Membrane-anchored lipid-binding protein LAM6 fusion protein
18 sp|A0PJX8|TMM82_HUMAN Transmembrane protein 82 OS=Homo sapiens GN=TMEM82 PE=2 SV=2 (Range: 97-285) 189 PDB1018 5-78 -7.980 17  2kr1_A mol:protein length:82 Ubiquitin protein ligase E3A
19 sp|A0PJY2|FEZF1_HUMAN Fez family zinc finger protein 1 OS=Homo sapiens GN=FEZF1 PE=2 SV=1 (Range: 106-243) 138 PDB1018 19-133 -9.140 13  3omd_A mol:protein length:145 Uncharacterized protein
20 sp|A0ZSE6|CC50C_HUMAN Cell cycle control protein 50C OS=Homo sapiens GN=TMEM30C PE=2 SV=2 (Range: 58-113) 56 PDB1018 7-34 -5.150 17  6atw_A mol:protein length:38 Chlorotoxin


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Godzik A., Rychlewski L. A support vector machine approach to the identification of phosphorylation sites. Cell Mol Biol Lett. 2005;10(1):73-89.