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Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:

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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 21-40 of 7012< prev pagenext page >

# Query Length Result vs. Range Score %id Covered by template(s)
21 sp|A1A4V9|CP093_HUMAN Coiled-coil domain-containing protein C16orf93 OS=Homo sapiens GN=C16orf93 PE=2 SV=1 (Range: 59-230) 172 SCOP207 22-171 -7.090 d5c6ka_ d.163.1.1 (A:) Integrase (Int) {Enterobacteria phage [TaxId: 10679]}
22 sp|A1A519|F170A_HUMAN Protein FAM170A OS=Homo sapiens GN=FAM170A PE=2 SV=1 (Range: 219-271) 53 SCOP207 5-41 -10.800 18  d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}
23 sp|A1A5B4|ANO9_HUMAN Anoctamin-9 OS=Homo sapiens GN=ANO9 PE=2 SV=2 (Range: 1-178) 178 SCOP207 110-174 -6.670 d5ii8a_ a.19.1.1 (A:) automated matches {Red abalone (Haliotis rufescens) [TaxId: 6454]}
24 sp|A1A5C7|S22AN_HUMAN Solute carrier family 22 member 23 OS=Homo sapiens GN=SLC22A23 PE=2 SV=2 (Range: 79-162) 84 SCOP207 2-46 -6.890 11  d3bula1 a.46.1.1 (A:651-740) Methionine synthase domain {Escherichia coli [TaxId: 562]}
25 sp|A1A5C7|S22AN_HUMAN Solute carrier family 22 member 23 OS=Homo sapiens GN=SLC22A23 PE=2 SV=2 (Range: 634-686) 53 SCOP207 1-53 -5.020 13  d1x3xa_ d.120.1.0 (A:) automated matches {Pig roundworm (Ascaris suum) [TaxId: 6253]}
26 sp|A1KZ92|PXDNL_HUMAN Peroxidasin-like protein OS=Homo sapiens GN=PXDNL PE=2 SV=3 (Range: 639-703) 65 SCOP207 1-36 -4.800 11  d2gmha2 d.16.1.8 (A:237-335) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]}
27 sp|A1L162|YB051_HUMAN Uncharacterized protein LOC285141 OS=Homo sapiens PE=2 SV=1 (Range: 57-113) 57 SCOP207 18-57 -12.900 17  d3o48a1 a.118.8.1 (A:5-127) automated matches {Baker`s yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
28 sp|A1YPR0|ZBT7C_HUMAN Zinc finger and BTB domain-containing protein 7C OS=Homo sapiens GN=ZBTB7C PE=1 SV=1 (Range: 219-284) 66 SCOP207 2-65 -7.090 12  d4xdqa_ b.29.1.0 (A:) automated matches {Mycobacterium thermoresistibile [TaxId: 1078020]}
29 tr|A2A296|A2A296_HUMAN BCL2-associated athanogene 2 (Fragment) OS=Homo sapiens GN=BAG2 PE=4 SV=1 (Range: 1-53) 53 SCOP207 6-48 -4.800 d2bjoa_ d.227.1.0 (A:) automated matches {Bacillus subtilis [TaxId: 1423]}
30 tr|A2A2F5|A2A2F5_HUMAN Prostate transmembrane protein, androgen induced 1 (Fragment) OS=Homo sapiens GN=PMEPA1 PE=4 SV=1 (Range: 175-227) 53 SCOP207 24-47 -4.590 16  d2cqla1 d.141.1.1 (A:1-87) Ribosomal protein L6 {Human (Homo sapiens) [TaxId: 9606]}
31 sp|A2A2Y4|FRMD3_HUMAN FERM domain-containing protein 3 OS=Homo sapiens GN=FRMD3 PE=2 SV=1 (Range: 439-495) 57 SCOP207 1-57 -7.410 28  d2a8aa_ d.92.1.7 (A:) automated matches {Clostridium botulinum [TaxId: 1491]}
32 tr|A2A393|A2A393_HUMAN Novel protein (FLJ46082) OS=Homo sapiens GN=RP11-738I14.8 PE=4 SV=1 (Range: 24-144) 121 SCOP207 8-118 -6.120 14  d1flca1 b.19.1.3 (A:151-306) Hemagglutinin domain of haemagglutinin-esterase-fusion glycoprotein HEF1 {Influenza C virus [TaxId: 11552]}
33 sp|A2A3K4|PTPC1_HUMAN Protein tyrosine phosphatase domain-containing protein 1 OS=Homo sapiens GN=PTPDC1 PE=2 SV=1 (Range: 396-482) 87 SCOP207 4-81 -8.270 19  d1wnya_ b.51.1.1 (A:) automated matches {Thermus thermophilus [TaxId: 274]}
34 sp|A2AJT9|CX023_HUMAN Uncharacterized protein CXorf23 OS=Homo sapiens GN=CXorf23 PE=1 SV=1 (Range: 653-711) 59 SCOP207 15-51 -7.320 13  d1rl6a1 d.141.1.1 (A:7-81) Ribosomal protein L6 {Bacillus stearothermophilus [TaxId: 1422]}
35 tr|A2BH96|A2BH96_HUMAN Neuroblastoma breakpoint family, member 10 OS=Homo sapiens GN=NBPF10 PE=4 SV=1 (Range: 1-72) 72 SCOP207 16-72 -6.180 21  d4efae2 d.81.4.1 (E:98-226) V-type ATPase subunit E C-terminal domain {Baker`s yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
36 tr|A2BH96|A2BH96_HUMAN Neuroblastoma breakpoint family, member 10 OS=Homo sapiens GN=NBPF10 PE=4 SV=1 (Range: 95-158) 64 SCOP207 19-64 -4.700 19  d1bw5a_ a.4.1.1 (A:) Insulin gene enhancer protein isl-1 {Norway rat (Rattus norvegicus) [TaxId: 10116]}
37 sp|A2RRH5|WDR27_HUMAN WD repeat-containing protein 27 OS=Homo sapiens GN=WDR27 PE=2 SV=3 (Range: 328-417) 90 SCOP207 1-70 -6.570 11  d2g87a_ f.13.1.2 (A:) automated matches {Cow (Bos taurus) [TaxId: 9913]}
38 sp|A2RRP1|NBAS_HUMAN Neuroblastoma-amplified sequence OS=Homo sapiens GN=NBAS PE=1 SV=2 (Range: 390-450) 61 SCOP207 1-60 -5.900 15  d5aoha_ d.169.1.0 (A:) automated matches {Serratia sp. [TaxId: 104623]}
39 sp|A2RRP1|NBAS_HUMAN Neuroblastoma-amplified sequence OS=Homo sapiens GN=NBAS PE=1 SV=2 (Range: 483-641) 159 SCOP207 39-76 -7.110 13  d1biaa1 a.4.5.1 (A:1-63) Biotin repressor, N-terminal domain {Escherichia coli [TaxId: 562]}
40 sp|A2RRP1|NBAS_HUMAN Neuroblastoma-amplified sequence OS=Homo sapiens GN=NBAS PE=1 SV=2 (Range: 666-720) 55 SCOP207 7-50 -5.020 11  d1tbge_ a.137.3.1 (E:) Transducin (heterotrimeric G protein), gamma chain {Cow (Bos taurus) [TaxId: 9913]}


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Osterman A, Overbeek R, Godzik A. Automatic detection of subsystem/pathway variants in genome analysis. Bioinformatics. 2005 Jun 1;21 Suppl 1:i478-i486.