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Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:

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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 51500next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 2N4O Entity 1(prereleased) 95 COG0516 24-95 -5.910 11  [O] COG1495 Disulfide bond formation protein DsbB
2 2N3I Entity 1(prereleased) 94 COG0516 4-93 -22.700 23  [T] KOG1480 Netrin transmembrane receptor unc-5
3 2NCS Entity 1(prereleased) 36 COG0516 8-36 -5.800 13  [T] KOG3860 Acyltransferase required for palmitoylation of Hedgehog (Hh) family of secreted signaling proteins
4 2N98 Entity 1(prereleased) 90 COG0516 19-86 -17.600 28  [Q] COG3433 Aryl carrier domain
5 2N2G Entity 1(prereleased) 33 COG0516 4-25 -3.850 40  [K] COG3655 Predicted transcriptional regulator
6 2N64 Entity 1(prereleased) 75 COG0516 6-75 -21.200 100  [T] KOG4348 Adaptor protein CMS/SETA
7 4S3U Entity 1(prereleased) 360 COG0516 1-360 -66.500 23  [G] COG3325 Chitinase
8 2N6O Entity 1(prereleased) 35 COG0516 1-33 -4.740 40  [T] KOG3611 Semaphorins
9 2NAZ Entity 1(prereleased) 112 COG0516 2-106 -40.700 36  [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
10 3JB5 Entity 1(prereleased) 315 COG0516 1-307 -33.300 12  [R] COG4653 Predicted phage phi-C31 gp36 major capsid-like protein
11 5A6D Entity 1(prereleased) 249 COG0516 2-249 -98.400 21  [L] KOG1636 DNA polymerase delta processivity factor (proliferating cell nuclear antigen)
12 5A6Q Entity 1(prereleased) 114 COG0516 3-114 -5.580 10  [P] COG5266 ABC-type Co2+ transport system, periplasmic component
13 5A7D Entity 1(prereleased) 382 COG0516 1-382 -79.600 62  [T] KOG1130 Predicted G-alpha GTPase interaction protein, contains GoLoco domain
14 5A7D Entity 2(prereleased) 341 COG0516 26-339 -22.400 12  [U] KOG4224 Armadillo repeat protein VAC8 required for vacuole fusion, inheritance and cytosol-to-vacuole protein targeting
174-339 -25.100 11  [S] KOG4646 Uncharacterized conserved protein, contains ARM repeats
15 5A7E Entity 1(prereleased) 496 COG0516 1-485 -78.200 21  [Q] KOG1263 Multicopper oxidases
16 5A8C Entity 1(prereleased) 320 COG0516 18-306 -26.700 18  [G] COG3507 Beta-xylosidase
17 5A8F Entity 1(prereleased) 219 COG0516 1-205 -6.950 [T] KOG0787 Dehydrogenase kinase
18 5A8F Entity 3(prereleased) 258 COG0516 74-249 -6.630 11  [J] COG1491 Predicted RNA-binding protein
19 5A8F Entity 2(prereleased) 189 COG0516 63-167 -6.280 15  [I] KOG2848 1-acyl-sn-glycerol-3-phosphate acyltransferase
20 5A8K Entity 1(prereleased) 550 COG0516 2-550 -184.000 71  [H] COG4058 Methyl coenzyme M reductase, alpha subunit


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;