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Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:

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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 51500next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 2N4O Entity 1(prereleased) 95 H.sapiens 1-41 -6.790 24  sp|Q9H8G2|CI082_HUMAN Uncharacterized protein C9orf82 OS=Homo sapiens GN=C9orf82 PE=1 SV=2
2 2N3I Entity 1(prereleased) 94 H.sapiens 3-92 -33.900 27  sp|P53355|DAPK1_HUMAN Death-associated protein kinase 1 OS=Homo sapiens GN=DAPK1 PE=1 SV=6 (Range: 1201-1430)
3 2NCS Entity 1(prereleased) 36 H.sapiens 2-23 -5.620 31  sp|Q9UN88|GBRT_HUMAN(removed signalp:1-21) Gamma-aminobutyric acid receptor subunit theta OS=Homo sapiens GN=GABRQ PE=2 SV=2 (Range: 451-611)
4 2N98 Entity 1(prereleased) 90 H.sapiens 3-90 -24.700 23  sp|P49327|FAS_HUMAN Fatty acid synthase OS=Homo sapiens GN=FASN PE=1 SV=3 (Range: 1951-2250)
5 2N2G Entity 1(prereleased) 33 H.sapiens 4-23 -5.450 35  sp|Q8NDH2|CM040_HUMAN Uncharacterized protein C13orf40 OS=Homo sapiens GN=C13orf40 PE=2 SV=2 (Range: 2101-2400)
6 2N64 Entity 1(prereleased) 75 H.sapiens 4-75 -21.300 100  sp|Q96B97|SH3K1_HUMAN SH3 domain-containing kinase-binding protein 1 OS=Homo sapiens GN=SH3KBP1 PE=1 SV=2 (Range: 451-665)
7 4S3U Entity 1(prereleased) 360 H.sapiens 1-360 -137.000 73  sp|P36222|CH3L1_HUMAN(removed signalp:1-21) Chitinase-3-like protein 1 OS=Homo sapiens GN=CHI3L1 PE=1 SV=2
8 2N6O Entity 1(prereleased) 35 H.sapiens 6-33 -5.580 26  sp|Q92854|SEM4D_HUMAN(removed signalp:1-23) Semaphorin-4D OS=Homo sapiens GN=SEMA4D PE=1 SV=1 (Range: 451-750)
9 2NAZ Entity 1(prereleased) 112 H.sapiens 14-82 -7.190 13  sp|Q12789|TF3C1_HUMAN General transcription factor 3C polypeptide 1 OS=Homo sapiens GN=GTF3C1 PE=1 SV=4 (Range: 151-450)
10 3JB5 Entity 1(prereleased) 315 H.sapiens 14-111 -5.490 10  sp|Q5SZJ8|BEND6_HUMAN BEN domain-containing protein 6 OS=Homo sapiens GN=BEND6 PE=2 SV=2
11 5A6D Entity 1(prereleased) 249 H.sapiens 2-249 -98.800 25  sp|P12004|PCNA_HUMAN Proliferating cell nuclear antigen OS=Homo sapiens GN=PCNA PE=1 SV=1
12 5A6Q Entity 1(prereleased) 114 H.sapiens 3-100 -8.090 sp|Q9Y4D8|K0614_HUMAN Probable E3 ubiquitin-protein ligase C12orf51 OS=Homo sapiens GN=C12orf51 PE=1 SV=5 (Range: 451-750)
13 5A7D Entity 1(prereleased) 382 H.sapiens 2-325 -78.600 50  sp|Q86YR5|GPSM1_HUMAN G-protein-signaling modulator 1 OS=Homo sapiens GN=GPSM1 PE=1 SV=2 (Range: 1-300)
36-350 -81.300 29  sp|Q96AY4|TTC28_HUMAN Tetratricopeptide repeat protein 28 OS=Homo sapiens GN=TTC28 PE=1 SV=4 (Range: 451-750)
81-382 -79.100 26  sp|Q96AY4|TTC28_HUMAN Tetratricopeptide repeat protein 28 OS=Homo sapiens GN=TTC28 PE=1 SV=4 (Range: 901-1200)
14 5A7D Entity 2(prereleased) 341 H.sapiens 1-339 -44.100 17  sp|Q1MX18|INSC_HUMAN Protein inscuteable homolog OS=Homo sapiens GN=INSC PE=1 SV=1
15 5A7E Entity 1(prereleased) 496 H.sapiens 1-464 -29.100 14  sp|P12259|FA5_HUMAN(removed signalp:1-28) Coagulation factor V OS=Homo sapiens GN=F5 PE=1 SV=4 (Range: 1-300)
34-464 -31.600 18  sp|P00451|FA8_HUMAN(removed signalp:1-19) Coagulation factor VIII OS=Homo sapiens GN=F8 PE=1 SV=1 (Range: 451-750)
16 5A8C Entity 1(prereleased) 320 H.sapiens 30-277 -8.320 14  sp|Q9NRN5|OLFL3_HUMAN(removed signalp:1-21) Olfactomedin-like protein 3 OS=Homo sapiens GN=OLFML3 PE=2 SV=1
17 5A8F Entity 1(prereleased) 219 H.sapiens 68-212 -10.000 11  sp|P24394|IL4RA_HUMAN(removed signalp:1-23) Interleukin-4 receptor subunit alpha OS=Homo sapiens GN=IL4R PE=1 SV=1 (Range: 1-300)
18 5A8F Entity 3(prereleased) 258 H.sapiens 101-250 -6.910 10  sp|O95477|ABCA1_HUMAN(removed signalp:1-44) ATP-binding cassette sub-family A member 1 OS=Homo sapiens GN=ABCA1 PE=1 SV=3 (Range: 1051-1350)
19 5A8F Entity 2(prereleased) 189 H.sapiens 63-189 -7.230 10  sp|Q75T13|PGAP1_HUMAN(removed signalp:1-24) GPI inositol-deacylase OS=Homo sapiens GN=PGAP1 PE=2 SV=1 (Range: 451-750)
20 5A8K Entity 1(prereleased) 550 H.sapiens 1-210 -6.600 17  sp|Q9Y6X6|MYO16_HUMAN Myosin-XVI OS=Homo sapiens GN=MYO16 PE=1 SV=3 (Range: 301-600)


FFAS is supported by the NIH grant R01-GM087218-01
1 2 4 1 9 2   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Jaroszewski L, Bierzynski A, Godzik A. Multiple model approach--dealing with alignment ambiguities in protein modeling. Pac Symp Biocomput. 1997;:328-39.