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Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:

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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 51500next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 2N4O Entity 1(prereleased) 95 PDB0516 1-94 -39.700 21  2nbh_A mol:protein length:107 Fungal hydrophobin
2 2N3I Entity 1(prereleased) 94 PDB0516 2-94 -45.800 100  2n83_A mol:protein length:98 Tumor necrosis factor receptor superfamily me
3 2NCS Entity 1(prereleased) 36 PDB0516 3-31 -27.700 65  3g9r_A mol:protein length:42 Fusion complex of HIV-1 Envelope glycoprotein
4 2N98 Entity 1(prereleased) 90 PDB0516 1-87 -47.600 28  2afd_A mol:protein length:88 protein Asl1650
5 2N2G Entity 1(prereleased) 33 PDB0516 1-33 -28.500 97  2lzy_A mol:protein length:35 ABU8-3
6 2N64 Entity 1(prereleased) 75 PDB0516 15-72 -8.090 13  4etp_B mol:protein length:333 Spindle pole body-associated protein VIK1
7 4S3U Entity 1(prereleased) 360 PDB0516 1-360 -137.000 73  1hjv_A mol:protein length:362 CHITINASE-3 LIKE PROTEIN 1
8 2N6O Entity 1(prereleased) 35 PDB0516 1-35 -25.100 77  1d1h_A mol:protein length:35 HANATOXIN TYPE 1
9 2NAZ Entity 1(prereleased) 112 PDB0516 2-109 -68.100 47  2mlk_A mol:protein length:119 RstA
10 3JB5 Entity 1(prereleased) 315 PDB0516 1-307 -40.900 15  3qpr_A mol:protein length:385 Major capsid protein
11 5A6D Entity 1(prereleased) 249 PDB0516 1-249 -108.000 82  1ge8_A mol:protein length:249 PROLIFERATION CELL NUCLEAR ANTIGEN
12 5A6Q Entity 1(prereleased) 114 PDB0516 1-114 -77.600 91  4ut5_A mol:protein length:114 LECB LECTIN
13 5A7D Entity 1(prereleased) 382 PDB0516 13-349 -88.100 67  4g2v_A mol:protein length:340 G-protein-signaling modulator 2
17-382 -87.500 62  5a6c_A mol:protein length:374 G-PROTEIN-SIGNALING MODULATOR 2, AFADIN
14 5A7D Entity 2(prereleased) 341 PDB0516 18-66 -20.800 26  3sf4_D mol:protein length:52 Protein inscuteable homolog
26-311 -20.800 14  3au3_A mol:protein length:344 Adenomatous polyposis coli protein
179-341 -21.700 10  3sla_A mol:protein length:168 Catenin beta-1
15 5A7E Entity 1(prereleased) 496 PDB0516 1-496 -158.000 99  4a2f_A mol:protein length:497 LACCASE
16 5A8C Entity 1(prereleased) 320 PDB0516 13-320 -98.800 37  3qed_A mol:protein length:314 Beta-xylosidase/alpha-L-arabinfuranosidase, g
17 5A8F Entity 1(prereleased) 219 PDB0516 1-219 -85.300 52  1tme_1 mol:protein length:274 THEILER`S MURINE ENCEPHALOMYELITIS VIRUS (SUB
18 5A8F Entity 3(prereleased) 258 PDB0516 1-257 -113.000 40  3cji_C mol:protein length:284 Polyprotein
19 5A8F Entity 2(prereleased) 189 PDB0516 1-189 -81.800 81  1tmf_3 mol:protein length:232 THEILER`S MURINE ENCEPHALOMYELITIS VIRUS (SUB
20 5A8K Entity 1(prereleased) 550 PDB0516 1-550 -190.000 99  3pot_A mol:protein length:550 Methyl-coenzyme M reductase I subunit alpha


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Reed JC, Doctor KS, Godzik A. The domains of apoptosis: a genomics perspective. Sci STKE. 2004 Jun 22;2004(239):re9. Review.