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Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:

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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 51500next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 2N4O Entity 1(prereleased) 95 PfamA30U 19-93 -16.400 28  PF01185.16; E9QT94_ASPFU/42-136; Fungal hydrophobin
2 2N3I Entity 1(prereleased) 94 PfamA30U 3-94 -23.000 13  PF14786.4; B4LWB0_DROVI/27-173; Tube Death domain
3 2NCS Entity 1(prereleased) 36 PfamA30U 2-26 -5.360 28  PF15349.4; D2I3G1_AILME/1-216; DDB1- and CUL4-associated factor 16
4 2N98 Entity 1(prereleased) 90 PfamA30U 19-83 -19.100 18  PF00550.23; Q0V6Q6_PHANO/3569-3638; Phosphopantetheine attachment site
5 2N2G Entity 1(prereleased) 33 PfamA30U 1-30 -6.970 50  PF11406.6; TACA2_TACTR/24-67; Antimicrobial peptide tachystatin A
6 2N64 Entity 1(prereleased) 75 PfamA30U 18-75 -9.630 27  PF10267.7; I3JPH2_ORENI/72-486; Predicted transmembrane and coiled-coil 2 protein
7 4S3U Entity 1(prereleased) 360 PfamA30U 3-337 -67.100 27  PF00704.26; Q9WFU7_9ABAC/160-544; Glycosyl hydrolases family 18
8 2N6O Entity 1(prereleased) 35 PfamA30U 1-30 -5.120 30  PF07740.10; TXHA5_HAPHA/1-33; Ion channel inhibitory toxin
9 2NAZ Entity 1(prereleased) 112 PfamA30U 27-103 -40.000 34  PF00486.26; I0DPC2_PROSM/145-220; Transcriptional regulatory protein, C terminal
10 3JB5 Entity 1(prereleased) 315 PfamA30U 9-303 -38.600 15  PF05065.11; A6VNQ3_ACTSZ/129-407; Phage capsid family
11 5A6D Entity 1(prereleased) 249 PfamA30U 13-245 -56.400 14  PF04139.11; RAD9B_MOUSE/14-271; Rad9
12 5A6Q Entity 1(prereleased) 114 PfamA30U 6-113 -59.100 35  PF07472.9; Q7MZN9_PHOLL/457-563; Fucose-binding lectin II (PA-IIL)
13 5A7D Entity 1(prereleased) 382 PfamA30U 19-382 -27.700 PF12569.6; A9SDC6_PHYPA/187-705; NMDA receptor-regulated protein 1
20-343 -45.400 10  PF17139.2; R7EHD4_9BACE/12-276; Domain of unknown function (DUF5112 topsan)
14 5A7D Entity 2(prereleased) 341 PfamA30U 44-341 -21.600 10  PF05804.10; KIFA3_HUMAN/13-720; Kinesin-associated protein (KAP)
15 5A7E Entity 1(prereleased) 496 PfamA30U 10-131 -50.800 37  PF07732.13; LAC5_ARATH/34-150; Multicopper oxidase
142-283 -62.700 70  PF00394.20; Q9UVU8_PYCCI/165-307; Multicopper oxidase
309-477 -15.400 16  PF06525.9; SOXE_SULAC/49-198; Sulfocyanin (SoxE) domain
346-469 -48.300 29  PF07731.12; Q875H3_PHACH/405-542; Multicopper oxidase
16 5A8C Entity 1(prereleased) 320 PfamA30U 22-308 -33.600 20  PF04616.12; Q9K6P5_BACHD/5-295; Glycosyl hydrolases family 43
17 5A8F Entity 1(prereleased) 219 PfamA30U 38-216 -15.300 11  PF08762.8; O56051_9VIRU/590-790; CRPV capsid protein like
70-213 -21.600 10  PF12264.6; O11979_9SECO/708-904; Waikavirus capsid protein 1
18 5A8F Entity 3(prereleased) 258 PfamA30U 1-258 -50.500 PF00915.18; CAPSD_FCVUR/112-395; Calicivirus coat protein
32-257 -56.200 13  PF12264.6; O11979_9SECO/708-904; Waikavirus capsid protein 1
19 5A8F Entity 2(prereleased) 189 PfamA30U 1-189 -63.300 15  PF00915.18; CAPSD_FCVUR/112-395; Calicivirus coat protein
20 5A8K Entity 1(prereleased) 550 PfamA30U 3-268 -112.000 63  PF02745.13; A0B6N6_METTP/7-276; Methyl-coenzyme M reductase alpha subunit, N-terminal domain
316-441 -45.500 78  PF02249.15; MCRX_METTH/318-443; Methyl-coenzyme M reductase alpha subunit, C-terminal domain


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Reed JC, Doctor KS, Godzik A. The domains of apoptosis: a genomics perspective. Sci STKE. 2004 Jun 22;2004(239):re9. Review.