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Results: 1-20 of 61954next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 5NQJ Entity 1(prereleased) 377 COG1018 89-374 -62.800 14  [R] COG2234 Predicted aminopeptidases
CSGID 1-376 -80.700 29  IDP01496 aminopeptidase VCA0813 [Vibrio cholerae O1 biovar El Tor str. N16961]
H.sapiens 41-376 -49.400 12  sp|Q969V3|NCLN_HUMAN Nicalin OS=Homo sapiens GN=NCLN PE=1 SV=2
70-373 -59.700 16  sp|Q16769|QPCT_HUMAN(removed signalp:1-28) Glutaminyl-peptide cyclotransferase OS=Homo sapiens GN=QPCT PE=1 SV=1
HGM_OVER 158-250 -2.970 16  HGC00509 gi|162658693|dbj|BAAX01000912.1|3.0 TMP00561;
NEW_HUMAN_DOMAINS 191-258 -5.180 tr|E7ES18|E7ES18_HUMAN Uncharacterized protein OS=Homo sapiens GN=PKD1 PE=4 SV=1 (Range: 484-560)
PDB1018 7-374 -89.100 28  6esl_A mol:protein length:393 Bacterial leucyl aminopeptidase
48-373 -89.100 30  5gne_A mol:protein length:375 Leucine aminopeptidase
PfamA32U 94-373 -46.600 12  PF16254.5; B8J2H8_DESDA/5-344; Domain of unknown function (DUF4910 topsan)
158-365 -62.900 22  PF04389.17; LPQL_MYCTU/252-471; Peptidase family M28
SCOP207 83-375 -88.000 33  d1rtqa_ c.56.5.4 (A:) Aminopeptidase {Aeromonas proteolytica [TaxId: 671]}
VFDB 89-374 -62.800 14  [R] COG2234 Predicted aminopeptidases
2 5OLI Entity 1(prereleased) 327 COG1018 17-325 -98.000 27  [R] COG0354 Predicted aminomethyltransferase related to GcvT
CSGID 4-327 -29.300 15  IDP01830 gene: gcvT; glycine cleavage system aminomethyltransferase T [Francisella tularensis subsp. tularensis SCHU S4] FTT0407 [Francisella tularensis subsp. tularensis SCHU S4]
H.sapiens 2-327 -123.000 100  sp|Q5T440|CA069_HUMAN Putative transferase C1orf69, mitochondrial OS=Homo sapiens GN=C1orf69 PE=1 SV=1
HGM_OVER 24-290 -4.350 13  PB060121 Q64SA7_BACFR/1-251 PB060121; Pfam-B_60121;
NEW_HUMAN_DOMAINS 195-237 -6.090 sp|Q5JXC2|MIIP_HUMAN Migration and invasion-inhibitory protein OS=Homo sapiens GN=MIIP PE=1 SV=3 (Range: 240-323)
PDB1018 2-324 -91.400 17  1vly_A mol:protein length:338 Unknown protein from 2D-page
PfamA32U 10-240 -20.000 13  PF01571.21; A0K1C3_ARTS2/441-725; Aminomethyltransferase folate-binding domain
SCOP207 4-245 -88.400 20  d1vlya2 d.250.1.1 (A:3-243) Hypothetical protein YgfZ, N-terminal domain {Escherichia coli [TaxId: 562]}
247-320 -13.800 d1vlya1 b.44.2.1 (A:244-325) Hypothetical protein YgfZ, C-terminal domain {Escherichia coli [TaxId: 562]}
VFDB 17-325 -98.000 27  [R] COG0354 Predicted aminomethyltransferase related to GcvT
3 5VMA Entity 1(prereleased) 703 COG1018 107-601 -7.770 13  [R] COG2936 Predicted acyl esterases
CSGID 1-675 -7.370 15  CPX_91688_91668 Complex of B1AP14_HUMAN with Q914E0_9ENTO [Undefined organism]
H.sapiens 1-277 -6.340 17  sp|Q92831|KAT2B_HUMAN Histone acetyltransferase KAT2B OS=Homo sapiens GN=KAT2B PE=1 SV=3 (Range: 601-832)
HGM_OVER 7-99 -4.510 12  PB009661 _Gut.Meta.Jp.0000785_ gi|162567239|dbj|BAAU01000237.1||2 (- 3549:4008~0 complete)
NEW_HUMAN_DOMAINS 180-242 -5.160 12  sp|Q9UHE8|STEA1_HUMAN Metalloreductase STEAP1 OS=Homo sapiens GN=STEAP1 PE=1 SV=1 (Range: 1-72)
PDB1018 1-703 -199.000 100  5bv9_A mol:protein length:709 Cellulose 1,4-beta-cellobiosidase
PfamA32U 3-700 -163.000 48  PF02011.15; D5ULA5_CELFN/52-685; Glycosyl hydrolase family 48
SCOP207 2-701 -163.000 48  d4jjja_ a.102.1.2 (A:) automated matches {Thermobifida fusca [TaxId: 2021]}
VFDB 107-601 -7.770 13  [R] COG2936 Predicted acyl esterases
4 5W1P Entity 1(prereleased) 363 COG1018 17-363 -105.000 33  [I] COG3407 Mevalonate pyrophosphate decarboxylase
CSGID 42-346 -12.300 IDP90543 gene: ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [Vibrio cholerae O1 biovar eltor str. N16961] VC2182 [Vibrio cholerae O1 biovar El Tor str. N16961]
75-346 -22.400 10  IDP02093 gene: thrB; homoserine kinase [Bacillus anthracis str. `Ames Ancestor`] GBAA1970 [Bacillus anthracis str. `Ames Ancestor`]
H.sapiens 1-204 -11.600 sp|Q8N0W3|FUK_HUMAN L-fucose kinase OS=Homo sapiens GN=FUK PE=2 SV=2 (Range: 601-900)
43-346 -85.400 17  sp|P53602|MVD1_HUMAN Diphosphomevalonate decarboxylase OS=Homo sapiens GN=MVD PE=1 SV=1
HGM_OVER 147-195 -2.920 14  HGC00711 gi|162743779|dbj|BAAZ01020484.1|1.0 TMP00907;
NEW_HUMAN_DOMAINS 146-198 -6.810 15  sp|A6NCN2|KT81L_HUMAN Keratin-81-like protein OS=Homo sapiens PE=2 SV=3 (Range: 1-83)
PDB1018 1-347 -87.100 19  4rkp_A mol:protein length:337 Putative uncharacterized protein Ta1305
PfamA32U 137-198 -13.600 18  PF00288.26; ISPE_BACSU/86-144; GHMP kinases N terminal domain
224-347 -34.400 15  PF18376.1; E9G9U6_DAPPU/190-374; Mevalonate 5-diphosphate decarboxylase C-terminal domain
SCOP207 48-224 -73.200 22  d3f0na1 d.14.1.0 (A:7-193) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
224-346 -34.100 11  d3f0na2 d.58.26.0 (A:194-397) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
VFDB 17-363 -105.000 33  [I] COG3407 Mevalonate pyrophosphate decarboxylase
5 5Y8X Entity 1(prereleased) 398 COG1018 35-397 -92.200 30  [E] COG0405 Gamma-glutamyltransferase
CSGID 1-397 -90.100 30  IDP01766 gene: ggt; gamma-glutamyltranspeptidase, (pxo2-55) [Bacillus anthracis str. `Ames Ancestor`] GBAA_pXO2_0063 [Bacillus anthracis str. `Ames Ancestor`]
38-397 -90.900 29  IDP05530 putative gamma-glutamyltranspeptidase [Clostridium difficile 630] CD1534 [Peptoclostridium difficile 630]
H.sapiens 29-397 -88.600 22  sp|P36269|GGT5_HUMAN(removed signalp:1-26) Gamma-glutamyltransferase 5 OS=Homo sapiens GN=GGT5 PE=1 SV=2
HGM_OVER 144-265 -4.650 HGC00962 gi|162759780|dbj|BAAZ01005693.1|3.0 TMP01305;
NEW_HUMAN_DOMAINS 231-351 -5.510 10  sp|Q8NHR7|CO043_HUMAN Uncharacterized protein C15orf43 OS=Homo sapiens GN=C15orf43 PE=2 SV=1 (Range: 1-107)
PDB1018 1-398 -109.000 99  5y9b_A mol:protein length:398 Gamma glutamyl transpeptidase
PfamA32U 58-397 -86.000 29  PF01019.21; YWRD_BACSU/24-520; Gamma-glutamyltranspeptidase
SCOP207 33-397 -97.100 36  g2dg5.1 d.153.1.6 (A:37-387,B:391-580) Gamma-glutamyltranspeptidase, GGT {Escherichia coli [TaxId: 562]}
VFDB 35-397 -92.200 30  [E] COG0405 Gamma-glutamyltransferase
6 5Y8X Entity 2(prereleased) 187 COG1018 1-180 -62.600 29  [E] COG0405 Gamma-glutamyltransferase
CSGID 1-179 -63.500 26  IDP05530 putative gamma-glutamyltranspeptidase [Clostridium difficile 630] CD1534 [Peptoclostridium difficile 630]
H.sapiens 1-179 -76.700 33  sp|Q9BX51|GGTL1_HUMAN Gamma-glutamyltransferase light chain 1 OS=Homo sapiens GN=GGTLC1 PE=2 SV=2
HGM_OVER 4-71 -3.560 10  PB000821 Q82P27_STRAW/1-209 PB000821; Pfam-B_821;
NEW_HUMAN_DOMAINS 39-111 -6.320 15  sp|O43149|ZZEF1_HUMAN Zinc finger ZZ-type and EF-hand domain-containing protein 1 OS=Homo sapiens GN=ZZEF1 PE=1 SV=6 (Range: 1285-1388)
PDB1018 1-187 -100.000 100  5xlu_B mol:protein length:187 Gamma glutamyl transpeptidase
PfamA32U 1-175 -60.900 28  PF01019.21; YWRD_BACSU/24-520; Gamma-glutamyltranspeptidase
SCOP207 1-179 -66.400 25  d2nlza1 d.153.1.6 (A:3-539) Cephalosporin acylase {Bacillus halodurans [TaxId: 86665]}
VFDB 1-180 -62.600 29  [E] COG0405 Gamma-glutamyltransferase
7 5YM9 Entity 1(prereleased) 384 COG1018 212-383 -4.650 14  [S] COG3101 Uncharacterized protein conserved in bacteria
CSGID 88-204 -4.550 16  IDP90330 hypothetical protein [Chlamydia trachomatis D/UW-3/CX] CT_602 [Chlamydia trachomatis D/UW-3/CX]
H.sapiens 49-80 -6.260 15  sp|O14633|LCE2B_HUMAN Late cornified envelope protein 2B OS=Homo sapiens GN=LCE2B PE=2 SV=1
HGM_OVER 199-358 -3.340 13  PB000790 _Gut.Meta.Jp.0111831_ gi|163310496|dbj|BABD01000203.1||3 (- 2591:4589~0 complete)
NEW_HUMAN_DOMAINS 39-87 -5.450 20  sp|Q8NEX6|WFD11_HUMAN Protein WFDC11 OS=Homo sapiens GN=WFDC11 PE=2 SV=1 (Range: 26-87)
PDB1018 1-384 -168.000 100  5suj_A mol:protein length:400 Uncharacterized protein
PfamA32U 230-342 -6.970 21  PF03076.14; GP3_EAVBU/1-160; Equine arteritis virus GP3
SCOP207 15-360 -5.210 11  d2qcva_ c.72.1.0 (A:) automated matches {Bacillus halodurans [TaxId: 272558]}
VFDB 212-383 -4.650 14  [S] COG3101 Uncharacterized protein conserved in bacteria
8 5YSG Entity 1(prereleased) 124 COG1018 1-94 -51.900 35  [C] COG3794 Plastocyanin
1-124 -9.550 15  [P] COG2822 Predicted periplasmic lipoprotein involved in iron transport
CSGID 1-93 -34.800 25  IDP05418 conserved hypothetical protein [Bacillus anthracis str. Ames] BA_1561 [Bacillus anthracis str. Ames]
H.sapiens 1-119 -11.200 sp|P40259|CD79B_HUMAN(removed signalp:1-28) B-cell antigen receptor complex-associated protein beta chain OS=Homo sapiens GN=CD79B PE=1 SV=1
13-101 -16.800 19  sp|P00450|CERU_HUMAN(removed signalp:1-19) Ceruloplasmin OS=Homo sapiens GN=CP PE=1 SV=1 (Range: 751-1046)
HGM_OVER 20-74 -4.850 10  HGC00683 gi|163310582|dbj|BABD01000118.1|4.0 TMP00861;
NEW_HUMAN_DOMAINS 1-100 -8.360 sp|Q8TDX9|PK1L1_HUMAN Polycystic kidney disease protein 1-like 1 OS=Homo sapiens GN=PKD1L1 PE=2 SV=1 (Range: 281-511)
PDB1018 1-124 -75.900 98  5YW3 Entity 1(prereleased)
PfamA32U 5-93 -54.000 37  PF00127.20; PLAS_SILLB/67-165; Copper binding proteins, plastocyanin/azurin family
SCOP207 1-124 -70.300 40  d3ef4a_ b.6.1.0 (A:) automated matches {Hyphomicrobium denitrificans [TaxId: 53399]}
VFDB 1-94 -51.900 35  [C] COG3794 Plastocyanin
1-124 -9.550 15  [P] COG2822 Predicted periplasmic lipoprotein involved in iron transport
9 5YTA Entity 1(prereleased) 332 COG1018 1-331 -94.800 62  [C] KOG1495 Lactate dehydrogenase
CSGID 17-330 -89.800 38  IDP02362 gene: ldh; L-lactate dehydrogenase [Bacillus anthracis str. `Ames Ancestor`] GBAA1923 [Bacillus anthracis str. `Ames Ancestor`]
H.sapiens 1-332 -96.800 97  sp|P07195|LDHB_HUMAN L-lactate dehydrogenase B chain OS=Homo sapiens GN=LDHB PE=1 SV=2
HGM_OVER 15-152 -3.140 14  HGC00672 gi|162843654|dbj|BABA01001055.1|4.0 TMP00845;
NEW_HUMAN_DOMAINS 77-204 -4.890 16  tr|E9PKE1|E9PKE1_HUMAN Uncharacterized protein OS=Homo sapiens PE=4 SV=1 (Range: 25-162)
PDB1018 1-332 -97.500 97  1i0z_A mol:protein length:333 L-LACTATE DEHYDROGENASE H CHAIN
PfamA32U 21-160 -52.500 37  PF00056.23; MDH_CHLAA/3-142; lactate/malate dehydrogenase, NAD binding domain
163-332 -48.000 18  PF02866.18; MDHC_MOUSE/156-331; lactate/malate dehydrogenase, alpha/beta C-terminal domain
SCOP207 1-160 -62.100 77  d4ajjc1 c.2.1.0 (C:1-159) automated matches {Norway rat (Rattus norvegicus) [TaxId: 10116]}
161-331 -66.900 72  d4ajja2 d.162.1.1 (A:160-331) automated matches {Norway rat (Rattus norvegicus) [TaxId: 10116]}
VFDB 1-331 -94.800 62  [C] KOG1495 Lactate dehydrogenase
10 5YW3 Entity 1(prereleased) 124 COG1018 1-94 -51.900 34  [C] COG3794 Plastocyanin
1-124 -9.560 15  [P] COG2822 Predicted periplasmic lipoprotein involved in iron transport
CSGID 1-93 -34.700 26  IDP05418 conserved hypothetical protein [Bacillus anthracis str. Ames] BA_1561 [Bacillus anthracis str. Ames]
H.sapiens 1-119 -11.300 sp|P40259|CD79B_HUMAN(removed signalp:1-28) B-cell antigen receptor complex-associated protein beta chain OS=Homo sapiens GN=CD79B PE=1 SV=1
13-101 -16.700 20  sp|P00450|CERU_HUMAN(removed signalp:1-19) Ceruloplasmin OS=Homo sapiens GN=CP PE=1 SV=1 (Range: 751-1046)
HGM_OVER 20-74 -4.890 10  HGC00683 gi|163310582|dbj|BABD01000118.1|4.0 TMP00861;
NEW_HUMAN_DOMAINS 1-100 -8.370 sp|Q8TDX9|PK1L1_HUMAN Polycystic kidney disease protein 1-like 1 OS=Homo sapiens GN=PKD1L1 PE=2 SV=1 (Range: 281-511)
PDB1018 1-124 -75.900 98  5YSG Entity 1(prereleased)
PfamA32U 5-93 -53.800 37  PF00127.20; PLAS_SILLB/67-165; Copper binding proteins, plastocyanin/azurin family
SCOP207 1-124 -69.900 97  d2ux6a_ b.6.1.1 (A:) automated matches {Achromobacter cycloclastes [TaxId: 223]}
VFDB 1-94 -51.900 34  [C] COG3794 Plastocyanin
1-124 -9.560 15  [P] COG2822 Predicted periplasmic lipoprotein involved in iron transport
11 5YXK Entity 1(prereleased) 111 COG1018 1-109 -15.200 19  [R] KOG3515 Predicted transmembrane protein of the immunoglobulin family of cell adhesion molecules
CSGID 1-111 -28.500 20  IDP06410 K14 [Human herpesvirus 8] YP_001129432 [Human herpesvirus 8]
H.sapiens 1-111 -52.900 98  sp|P42081|CD86_HUMAN(removed signalp:1-23) T-lymphocyte activation antigen CD86 OS=Homo sapiens GN=CD86 PE=1 SV=2
HGM_OVER 1-108 -5.390 PB011023 A7V2G7_BACUN/1-167 PB011023; Pfam-B_11023;
NEW_HUMAN_DOMAINS 1-107 -21.600 sp|Q8IZF5|GP113_HUMAN Probable G-protein coupled receptor 113 OS=Homo sapiens GN=GPR113 PE=2 SV=1 (Range: 234-351)
PDB1018 4-111 -72.100 100  1i85_A mol:protein length:110 T LYMPHOCYTE ACTIVATION ANTIGEN CD86
PfamA32U 1-109 -45.900 12  PF07686.17; A2BGB5_DANRE/30-142; Immunoglobulin V-set domain
SCOP207 4-111 -72.100 100  d1ncna_ b.1.1.1 (A:) CD86 (b7-2), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
VFDB 1-109 -15.200 19  [R] KOG3515 Predicted transmembrane protein of the immunoglobulin family of cell adhesion molecules
12 5Z0B Entity 1(prereleased) 585 COG1018 6-566 -9.380 10  [IG] KOG1340 Prosaposin
CSGID 13-300 -8.880 14  IDP06013 LCCL-related multimodular protein CCp1C [Toxoplasma gondii] ACJ45039 [Toxoplasma gondii]
H.sapiens 1-585 -161.000 100  sp|P02768|ALBU_HUMAN(removed signalp:1-18) Serum albumin OS=Homo sapiens GN=ALB PE=1 SV=2
HGM_OVER 456-585 -3.850 PB018258 Q7MT99_PORGI/1-157 PB018258; Pfam-B_18258;
NEW_HUMAN_DOMAINS 52-292 -9.110 11  sp|Q7RTU9|STRC_HUMAN Stereocilin OS=Homo sapiens GN=STRC PE=2 SV=1 (Range: 350-571)
PDB1018 1-584 -165.000 74  5ori_A mol:protein length:583 Albumin
PfamA32U 29-512 -39.700 12  PF05782.11; H0WRX2_OTOGA/1-562; Extracellular matrix protein 1 (ECM1)
390-568 -58.200 74  PF00273.20; L9L5M3_TUPCH/432-610; Serum albumin family
SCOP207 2-196 -63.200 100  d1n5ua1 a.126.1.1 (A:2-196) Serum albumin {Human (Homo sapiens) [TaxId: 9606]}
389-584 -62.200 100  d1n5ua3 a.126.1.1 (A:389-584) Serum albumin {Human (Homo sapiens) [TaxId: 9606]}
VFDB 6-566 -9.380 10  [IG] KOG1340 Prosaposin
13 5Z0M Entity 1(prereleased) 275 COG1018 10-238 -7.020 10  [S] COG5619 Uncharacterized conserved protein
CSGID 5-83 -5.150 10  IDP93884 secretion system chaperone SscB [Yersinia enterocolitica subsp. palearctica Y11] YP_006007028 [Yersinia enterocolitica subsp. palearctica Y11]
H.sapiens 1-273 -75.300 26  sp|P17643|TYRP1_HUMAN(removed signalp:1-24) 5,6-dihydroxyindole-2-carboxylic acid oxidase OS=Homo sapiens GN=TYRP1 PE=1 SV=2
HGM_OVER 17-92 -5.080 20  HGC00928 gi|162868028|dbj|BABB01001979.1|3.0 TMP01255;
NEW_HUMAN_DOMAINS 3-78 -6.280 16  tr|C9JUH3|C9JUH3_HUMAN Uncharacterized protein OS=Homo sapiens GN=CCM2 PE=4 SV=1 (Range: 200-292)
PDB1018 1-275 -122.000 99  1wx2_A mol:protein length:281 tyrosinase
PfamA32U 28-228 -72.800 28  PF00264.20; A2QUC2_ASPNC/107-337; Common central domain of tyrosinase
SCOP207 2-273 -119.000 99  d3awua1 a.86.1.3 (A:2-273) Tyrosinase {Streptomyces castaneoglobisporus [TaxId: 79261]}
VFDB 10-238 -7.020 10  [S] COG5619 Uncharacterized conserved protein
14 5Z0M Entity 2(prereleased) 128 COG1018 1-128 -8.440 15  [Q] COG2132 Putative multicopper oxidases
CSGID 3-111 -7.800 14  IDP00435 gene: sufI; repressor protein for FtsI YPO0673 [Yersinia pestis CO92]
H.sapiens 1-115 -7.010 10  sp|Q9H5V8|CDCP1_HUMAN(removed signalp:1-29) CUB domain-containing protein 1 OS=Homo sapiens GN=CDCP1 PE=1 SV=3 (Range: 451-750)
HGM_OVER 6-116 -6.790 12  HGC00683 gi|163310582|dbj|BABD01000118.1|4.0 TMP00861;
NEW_HUMAN_DOMAINS 76-94 -5.740 28  sp|O60663|LMX1B_HUMAN LIM homeobox transcription factor 1-beta OS=Homo sapiens GN=LMX1B PE=1 SV=2 (Range: 259-379)
PDB1018 1-128 -82.900 98  1wx2_B mol:protein length:134 MelC
PfamA32U 12-122 -61.500 45  PF06236.11; B5GYP9_STRC2/21-149; Tyrosinase co-factor MelC1
SCOP207 1-116 -9.540 13  d3en8a1 d.17.4.20 (A:1-127) Uncharacterized protein BxeB2092 {Burkholderia xenovorans [TaxId: 36873]}
40-122 -57.800 100  d3awub_ d.386.1.1 (B:) Tyrosinase cofactor MelC1 {Streptomyces castaneoglobisporus [TaxId: 79261]}
VFDB 1-128 -8.440 15  [Q] COG2132 Putative multicopper oxidases
15 5Z4O Entity 1(prereleased) 208 COG1018 1-208 -79.700 83  [L] COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
CSGID 1-208 -84.600 88  IDP90819 gene: gyrB; DNA gyrase subunit B [Yersinia pestis CO92] YPO4094 [Yersinia pestis CO92]
H.sapiens 1-207 -82.100 23  sp|Q02880|TOP2B_HUMAN DNA topoisomerase 2-beta OS=Homo sapiens GN=TOP2B PE=1 SV=3 (Range: 1-300)
HGM_OVER 66-188 -3.090 10  HGC00789 gi|163310627|dbj|BABD01000073.1|7.0 TMP01036;
NEW_HUMAN_DOMAINS 10-93 -5.810 10  sp|Q9NT68|TEN2_HUMAN Teneurin-2 OS=Homo sapiens GN=ODZ2 PE=1 SV=3 (Range: 2403-2499)
PDB1018 2-207 -105.000 100  4hyp_A mol:protein length:215 DNA gyrase subunit B
PfamA32U 22-126 -13.400 16  PF13589.6; A5G4D8_GEOUR/22-165; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SCOP207 2-205 -101.000 55  d4k4oa1 d.122.1.0 (A:18-224) automated matches {Enterococcus faecalis [TaxId: 226185]}
VFDB 1-208 -79.700 83  [L] COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
16 5Z4P Entity 3(prereleased) 440 COG1018 1-439 -125.000 84  [Z] KOG1376 Alpha tubulin
CSGID 3-259 -11.800 15  IDP02166 gene: ftsZ; cell division protein FtsZ [Francisella tularensis subsp. tularensis SCHU S4] FTT0188 [Francisella tularensis subsp. tularensis SCHU S4]
H.sapiens 1-440 -129.000 96  sp|Q6PEY2|TBA3E_HUMAN Tubulin alpha-3E chain OS=Homo sapiens GN=TUBA3E PE=1 SV=2
HGM_OVER 120-294 -8.560 13  PB012991 Q2RHT0_MOOTA/1-175 PB012991; Pfam-B_12991;
NEW_HUMAN_DOMAINS 374-434 -14.800 13  sp|Q9BUK6|MSTO1_HUMAN Protein misato homolog 1 OS=Homo sapiens GN=MSTO1 PE=1 SV=1 (Range: 505-570)
PDB1018 1-440 -127.000 99  1z2b_A mol:protein length:448 Tubulin alpha chain
PfamA32U 3-214 -42.100 15  PF00091.25; CETZ_METTP/3-184; Tubulin/FtsZ family, GTPase domain
55-244 -38.400 17  PF14881.6; C5FUZ2_ARTOC/120-304; Tubulin domain
263-391 -38.300 69  PF03953.17; S7XG08_SPRLO/260-389; Tubulin C-terminal domain
SCOP207 1-245 -98.100 100  d3ryca1 c.32.1.1 (A:1-245) automated matches {Sheep (Ovis aries) [TaxId: 9940]}
246-438 -61.600 100  d3ryca2 d.79.2.1 (A:246-438) automated matches {Sheep (Ovis aries) [TaxId: 9940]}
VFDB 1-439 -125.000 84  [Z] KOG1376 Alpha tubulin
17 5Z4P Entity 4(prereleased) 431 COG1018 1-431 -119.000 41  [Z] KOG1376 Alpha tubulin
CSGID 3-257 -11.800 17  IDP02166 gene: ftsZ; cell division protein FtsZ [Francisella tularensis subsp. tularensis SCHU S4] FTT0188 [Francisella tularensis subsp. tularensis SCHU S4]
H.sapiens 1-431 -120.000 82  sp|Q99867|TBB4Q_HUMAN Putative tubulin beta-4q chain OS=Homo sapiens GN=TUBB4Q PE=5 SV=1
HGM_OVER 118-292 -8.650 14  PB012991 Q2RHT0_MOOTA/1-175 PB012991; Pfam-B_12991;
NEW_HUMAN_DOMAINS 364-424 -15.000 13  sp|Q9BUK6|MSTO1_HUMAN Protein misato homolog 1 OS=Homo sapiens GN=MSTO1 PE=1 SV=1 (Range: 505-570)
PDB1018 1-426 -121.000 97  5n5n_B mol:protein length:426 Tubulin beta chain
PfamA32U 3-212 -41.600 18  PF00091.25; CETZ_METTP/3-184; Tubulin/FtsZ family, GTPase domain
53-242 -37.400 16  PF14881.6; C5FUZ2_ARTOC/120-304; Tubulin domain
261-381 -35.900 36  PF03953.17; S7XG08_SPRLO/260-389; Tubulin C-terminal domain
SCOP207 1-243 -94.300 45  d3ryca1 c.32.1.1 (A:1-245) automated matches {Sheep (Ovis aries) [TaxId: 9940]}
244-431 -63.200 98  d3rycb2 d.79.2.1 (B:246-442) automated matches {Sheep (Ovis aries) [TaxId: 9940]}
VFDB 1-431 -119.000 41  [Z] KOG1376 Alpha tubulin
18 5Z4P Entity 6(prereleased) 378 COG1018 3-374 -66.800 18  [O] KOG2158 Tubulin-tyrosine ligase-related protein
CSGID 148-363 -11.200 17  IDP00575 gene: ddl; D-alanine--D-alanine ligase YPO0557 [Yersinia pestis CO92]
H.sapiens 1-378 -123.000 88  sp|Q8NG68|TTL_HUMAN Tubulin--tyrosine ligase OS=Homo sapiens GN=TTL PE=1 SV=2
HGM_OVER 168-378 -3.880 10  PB000790 _Gut.Meta.Jp.0111831_ gi|163310496|dbj|BABD01000203.1||3 (- 2591:4589~0 complete)
NEW_HUMAN_DOMAINS 1-83 -21.300 97  sp|Q8NG68|TTL_HUMAN Tubulin--tyrosine ligase OS=Homo sapiens GN=TTL PE=1 SV=2 (Range: 1-84)
PDB1018 1-378 -126.000 100  5jcb_F mol:protein length:388 Tubulin-Tyrosine Ligase
PfamA32U 54-367 -90.200 24  PF03133.15; Q9VX74_DROME/100-420; Tubulin-tyrosine ligase family
SCOP207 1-76 -18.500 100  d4tv9f1 c.30.1.9 (F:1-76) Tubulin tyrosine ligase (TTL) N-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
71-378 -111.000 95  d4tv9f2 d.142.1.10 (F:77-378) Tubulin tyrosine ligase (TTL) C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
VFDB 3-374 -66.800 18  [O] KOG2158 Tubulin-tyrosine ligase-related protein
19 5Z4Q Entity 5(prereleased) 186 COG1018 111-186 -7.300 17  [S] COG5374 Uncharacterized conserved protein
CSGID 90-186 -6.130 IDP06003 SF-assemblin, putative [Toxoplasma gondii ME49] EEB00658 [Toxoplasma gondii ME49]
H.sapiens 1-186 -100.000 99  sp|Q9H169|STMN4_HUMAN Stathmin-4 OS=Homo sapiens GN=STMN4 PE=2 SV=1
HGM_OVER 121-184 -4.650 PB003142 Q8DVS6_STRMU/1-162 PB003142; Pfam-B_3142;
NEW_HUMAN_DOMAINS 58-104 -6.440 17  sp|Q96EK2|PF21B_HUMAN PHD finger protein 21B OS=Homo sapiens GN=PHF21B PE=2 SV=1 (Range: 144-233)
PDB1018 1-186 -100.000 100  5xaf_E mol:protein length:189 Stathmin-4
PfamA32U 49-184 -73.200 99  PF00836.19; G3VYK5_SARHA/49-184; Stathmin family
SCOP207 49-186 -73.600 98  d3ryce1 a.137.10.1 (E:5-145) Stathmin 4 {Norway rat (Rattus norvegicus) [TaxId: 10116]}
VFDB 111-186 -7.300 17  [S] COG5374 Uncharacterized conserved protein
20 5Z6B Entity 1(prereleased) 427 COG1018 1-421 -67.100 15  [G] COG2182 Maltose-binding periplasmic proteins/domains
CSGID 1-426 -86.900 20  IDP95187 gene: lmo0181; lmo0181 [Listeria monocytogenes EGD-e] CAC98396 [Listeria monocytogenes EGD-e]
H.sapiens 61-367 -5.540 sp|Q75VX8|FA59B_HUMAN Protein FAM59B OS=Homo sapiens GN=FAM59B PE=2 SV=3 (Range: 1-300)
HGM_OVER 1-156 -10.100 HGC00683 gi|163310582|dbj|BABD01000118.1|4.0 TMP00861;
NEW_HUMAN_DOMAINS 88-181 -5.340 sp|Q96FT9|IFT43_HUMAN Intraflagellar transport protein 43 homolog OS=Homo sapiens GN=IFT43 PE=1 SV=3 (Range: 101-185)
PDB1018 6-427 -111.000 96  4r6k_A mol:protein length:428 SOLUTE-BINDING PROTEIN
PfamA32U 1-374 -18.800 11  PF02030.15; Y045_MYCGE/1-482; Hypothetical lipoprotein (MG045 family)
51-353 -44.700 12  PF13416.6; R5SZY1_9CLOT/78-401; Bacterial extracellular solute-binding protein
SCOP207 31-426 -107.000 100  d4r6ka_ c.94.1.0 (A:) automated matches {Bacillus subtilis [TaxId: 224308]}
VFDB 1-421 -67.100 15  [G] COG2182 Maltose-binding periplasmic proteins/domains


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Godzik A., Rychlewski L. A support vector machine approach to the identification of phosphorylation sites. Cell Mol Biol Lett. 2005;10(1):73-89.