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Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:

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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 61940next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 5NQJ Entity 1(prereleased) 377 HGM_OVER 158-250 -2.970 16  HGC00509 gi|162658693|dbj|BAAX01000912.1|3.0 TMP00561;
2 5OLI Entity 1(prereleased) 327 HGM_OVER 24-290 -4.350 13  PB060121 Q64SA7_BACFR/1-251 PB060121; Pfam-B_60121;
3 5VMA Entity 1(prereleased) 703 HGM_OVER 7-99 -4.510 12  PB009661 _Gut.Meta.Jp.0000785_ gi|162567239|dbj|BAAU01000237.1||2 (- 3549:4008~0 complete)
4 5W1P Entity 1(prereleased) 363 HGM_OVER 147-195 -2.920 14  HGC00711 gi|162743779|dbj|BAAZ01020484.1|1.0 TMP00907;
5 5Y8X Entity 1(prereleased) 398 HGM_OVER 144-265 -4.650 HGC00962 gi|162759780|dbj|BAAZ01005693.1|3.0 TMP01305;
6 5Y8X Entity 2(prereleased) 187 HGM_OVER 4-71 -3.560 10  PB000821 Q82P27_STRAW/1-209 PB000821; Pfam-B_821;
7 5YM9 Entity 1(prereleased) 384 HGM_OVER 199-358 -3.340 13  PB000790 _Gut.Meta.Jp.0111831_ gi|163310496|dbj|BABD01000203.1||3 (- 2591:4589~0 complete)
8 5YSG Entity 1(prereleased) 124 HGM_OVER 20-74 -4.850 10  HGC00683 gi|163310582|dbj|BABD01000118.1|4.0 TMP00861;
9 5YTA Entity 1(prereleased) 332 HGM_OVER 15-152 -3.140 14  HGC00672 gi|162843654|dbj|BABA01001055.1|4.0 TMP00845;
10 5YW3 Entity 1(prereleased) 124 HGM_OVER 20-74 -4.890 10  HGC00683 gi|163310582|dbj|BABD01000118.1|4.0 TMP00861;
11 5YXK Entity 1(prereleased) 111 HGM_OVER 1-108 -5.390 PB011023 A7V2G7_BACUN/1-167 PB011023; Pfam-B_11023;
12 5Z0B Entity 1(prereleased) 585 HGM_OVER 456-585 -3.850 PB018258 Q7MT99_PORGI/1-157 PB018258; Pfam-B_18258;
13 5Z0M Entity 1(prereleased) 275 HGM_OVER 17-92 -5.080 20  HGC00928 gi|162868028|dbj|BABB01001979.1|3.0 TMP01255;
14 5Z0M Entity 2(prereleased) 128 HGM_OVER 6-116 -6.790 12  HGC00683 gi|163310582|dbj|BABD01000118.1|4.0 TMP00861;
15 5Z4O Entity 1(prereleased) 208 HGM_OVER 66-188 -3.090 10  HGC00789 gi|163310627|dbj|BABD01000073.1|7.0 TMP01036;
16 5Z4P Entity 3(prereleased) 440 HGM_OVER 120-294 -8.560 13  PB012991 Q2RHT0_MOOTA/1-175 PB012991; Pfam-B_12991;
17 5Z4P Entity 4(prereleased) 431 HGM_OVER 118-292 -8.650 14  PB012991 Q2RHT0_MOOTA/1-175 PB012991; Pfam-B_12991;
18 5Z4P Entity 6(prereleased) 378 HGM_OVER 168-378 -3.880 10  PB000790 _Gut.Meta.Jp.0111831_ gi|163310496|dbj|BABD01000203.1||3 (- 2591:4589~0 complete)
19 5Z4Q Entity 5(prereleased) 186 HGM_OVER 121-184 -4.650 PB003142 Q8DVS6_STRMU/1-162 PB003142; Pfam-B_3142;
20 5Z6B Entity 1(prereleased) 427 HGM_OVER 1-156 -10.100 HGC00683 gi|163310582|dbj|BABD01000118.1|4.0 TMP00861;


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Rychlewski L, Zhang B, Godzik A. Functional insights from structural predictions: analysis of the Escherichia coli genome. Protein Sci. 1999 Mar;8(3):614-24.