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Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:

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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 61954next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 5NQJ Entity 1(prereleased) 377 PDB1018 7-374 -89.100 28  6esl_A mol:protein length:393 Bacterial leucyl aminopeptidase
48-373 -89.100 30  5gne_A mol:protein length:375 Leucine aminopeptidase
2 5OLI Entity 1(prereleased) 327 PDB1018 2-324 -91.400 17  1vly_A mol:protein length:338 Unknown protein from 2D-page
3 5VMA Entity 1(prereleased) 703 PDB1018 1-703 -199.000 100  5bv9_A mol:protein length:709 Cellulose 1,4-beta-cellobiosidase
4 5W1P Entity 1(prereleased) 363 PDB1018 1-347 -87.100 19  4rkp_A mol:protein length:337 Putative uncharacterized protein Ta1305
5 5Y8X Entity 1(prereleased) 398 PDB1018 1-398 -109.000 99  5y9b_A mol:protein length:398 Gamma glutamyl transpeptidase
6 5Y8X Entity 2(prereleased) 187 PDB1018 1-187 -100.000 100  5xlu_B mol:protein length:187 Gamma glutamyl transpeptidase
7 5YM9 Entity 1(prereleased) 384 PDB1018 1-384 -168.000 100  5suj_A mol:protein length:400 Uncharacterized protein
8 5YSG Entity 1(prereleased) 124 PDB1018 1-124 -75.900 98  5YW3 Entity 1(prereleased)
9 5YTA Entity 1(prereleased) 332 PDB1018 1-332 -97.500 97  1i0z_A mol:protein length:333 L-LACTATE DEHYDROGENASE H CHAIN
10 5YW3 Entity 1(prereleased) 124 PDB1018 1-124 -75.900 98  5YSG Entity 1(prereleased)
11 5YXK Entity 1(prereleased) 111 PDB1018 4-111 -72.100 100  1i85_A mol:protein length:110 T LYMPHOCYTE ACTIVATION ANTIGEN CD86
12 5Z0B Entity 1(prereleased) 585 PDB1018 1-584 -165.000 74  5ori_A mol:protein length:583 Albumin
13 5Z0M Entity 1(prereleased) 275 PDB1018 1-275 -122.000 99  1wx2_A mol:protein length:281 tyrosinase
14 5Z0M Entity 2(prereleased) 128 PDB1018 1-128 -82.900 98  1wx2_B mol:protein length:134 MelC
15 5Z4O Entity 1(prereleased) 208 PDB1018 2-207 -105.000 100  4hyp_A mol:protein length:215 DNA gyrase subunit B
16 5Z4P Entity 3(prereleased) 440 PDB1018 1-440 -127.000 99  1z2b_A mol:protein length:448 Tubulin alpha chain
17 5Z4P Entity 4(prereleased) 431 PDB1018 1-426 -121.000 97  5n5n_B mol:protein length:426 Tubulin beta chain
18 5Z4P Entity 6(prereleased) 378 PDB1018 1-378 -126.000 100  5jcb_F mol:protein length:388 Tubulin-Tyrosine Ligase
19 5Z4Q Entity 5(prereleased) 186 PDB1018 1-186 -100.000 100  5xaf_E mol:protein length:189 Stathmin-4
20 5Z6B Entity 1(prereleased) 427 PDB1018 6-427 -111.000 96  4r6k_A mol:protein length:428 SOLUTE-BINDING PROTEIN


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Godzik A., Rychlewski L. A support vector machine approach to the identification of phosphorylation sites. Cell Mol Biol Lett. 2005;10(1):73-89.