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Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:

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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 61954next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 5NQJ Entity 1(prereleased) 377 SCOP207 83-375 -88.000 33  d1rtqa_ c.56.5.4 (A:) Aminopeptidase {Aeromonas proteolytica [TaxId: 671]}
2 5OLI Entity 1(prereleased) 327 SCOP207 4-245 -88.400 20  d1vlya2 d.250.1.1 (A:3-243) Hypothetical protein YgfZ, N-terminal domain {Escherichia coli [TaxId: 562]}
247-320 -13.800 d1vlya1 b.44.2.1 (A:244-325) Hypothetical protein YgfZ, C-terminal domain {Escherichia coli [TaxId: 562]}
3 5VMA Entity 1(prereleased) 703 SCOP207 2-701 -163.000 48  d4jjja_ a.102.1.2 (A:) automated matches {Thermobifida fusca [TaxId: 2021]}
4 5W1P Entity 1(prereleased) 363 SCOP207 48-224 -73.200 22  d3f0na1 d.14.1.0 (A:7-193) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
224-346 -34.100 11  d3f0na2 d.58.26.0 (A:194-397) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
5 5Y8X Entity 1(prereleased) 398 SCOP207 33-397 -97.100 36  g2dg5.1 d.153.1.6 (A:37-387,B:391-580) Gamma-glutamyltranspeptidase, GGT {Escherichia coli [TaxId: 562]}
6 5Y8X Entity 2(prereleased) 187 SCOP207 1-179 -66.400 25  d2nlza1 d.153.1.6 (A:3-539) Cephalosporin acylase {Bacillus halodurans [TaxId: 86665]}
7 5YM9 Entity 1(prereleased) 384 SCOP207 15-360 -5.210 11  d2qcva_ c.72.1.0 (A:) automated matches {Bacillus halodurans [TaxId: 272558]}
8 5YSG Entity 1(prereleased) 124 SCOP207 1-124 -70.300 40  d3ef4a_ b.6.1.0 (A:) automated matches {Hyphomicrobium denitrificans [TaxId: 53399]}
9 5YTA Entity 1(prereleased) 332 SCOP207 1-160 -62.100 77  d4ajjc1 c.2.1.0 (C:1-159) automated matches {Norway rat (Rattus norvegicus) [TaxId: 10116]}
161-331 -66.900 72  d4ajja2 d.162.1.1 (A:160-331) automated matches {Norway rat (Rattus norvegicus) [TaxId: 10116]}
10 5YW3 Entity 1(prereleased) 124 SCOP207 1-124 -69.900 97  d2ux6a_ b.6.1.1 (A:) automated matches {Achromobacter cycloclastes [TaxId: 223]}
11 5YXK Entity 1(prereleased) 111 SCOP207 4-111 -72.100 100  d1ncna_ b.1.1.1 (A:) CD86 (b7-2), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
12 5Z0B Entity 1(prereleased) 585 SCOP207 2-196 -63.200 100  d1n5ua1 a.126.1.1 (A:2-196) Serum albumin {Human (Homo sapiens) [TaxId: 9606]}
389-584 -62.200 100  d1n5ua3 a.126.1.1 (A:389-584) Serum albumin {Human (Homo sapiens) [TaxId: 9606]}
13 5Z0M Entity 1(prereleased) 275 SCOP207 2-273 -119.000 99  d3awua1 a.86.1.3 (A:2-273) Tyrosinase {Streptomyces castaneoglobisporus [TaxId: 79261]}
14 5Z0M Entity 2(prereleased) 128 SCOP207 1-116 -9.540 13  d3en8a1 d.17.4.20 (A:1-127) Uncharacterized protein BxeB2092 {Burkholderia xenovorans [TaxId: 36873]}
40-122 -57.800 100  d3awub_ d.386.1.1 (B:) Tyrosinase cofactor MelC1 {Streptomyces castaneoglobisporus [TaxId: 79261]}
15 5Z4O Entity 1(prereleased) 208 SCOP207 2-205 -101.000 55  d4k4oa1 d.122.1.0 (A:18-224) automated matches {Enterococcus faecalis [TaxId: 226185]}
16 5Z4P Entity 3(prereleased) 440 SCOP207 1-245 -98.100 100  d3ryca1 c.32.1.1 (A:1-245) automated matches {Sheep (Ovis aries) [TaxId: 9940]}
246-438 -61.600 100  d3ryca2 d.79.2.1 (A:246-438) automated matches {Sheep (Ovis aries) [TaxId: 9940]}
17 5Z4P Entity 4(prereleased) 431 SCOP207 1-243 -94.300 45  d3ryca1 c.32.1.1 (A:1-245) automated matches {Sheep (Ovis aries) [TaxId: 9940]}
244-431 -63.200 98  d3rycb2 d.79.2.1 (B:246-442) automated matches {Sheep (Ovis aries) [TaxId: 9940]}
18 5Z4P Entity 6(prereleased) 378 SCOP207 1-76 -18.500 100  d4tv9f1 c.30.1.9 (F:1-76) Tubulin tyrosine ligase (TTL) N-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
71-378 -111.000 95  d4tv9f2 d.142.1.10 (F:77-378) Tubulin tyrosine ligase (TTL) C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
19 5Z4Q Entity 5(prereleased) 186 SCOP207 49-186 -73.600 98  d3ryce1 a.137.10.1 (E:5-145) Stathmin 4 {Norway rat (Rattus norvegicus) [TaxId: 10116]}
20 5Z6B Entity 1(prereleased) 427 SCOP207 31-426 -107.000 100  d4r6ka_ c.94.1.0 (A:) automated matches {Bacillus subtilis [TaxId: 224308]}


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Godzik A., Rychlewski L. A support vector machine approach to the identification of phosphorylation sites. Cell Mol Biol Lett. 2005;10(1):73-89.