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Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:

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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 21-40 of 17691< prev pagenext page >

# Query Length Result vs. Range Score %id Covered by template(s)
21 PF13640.6; B4RGC0_PHEZH/142-243; 2OG-Fe(II) oxygenase superfamily 102 COG1018 2-102 -50.300 22  [B] KOG3844 Predicted component of NuA3 histone acetyltransferase complex
22 PF13661.6; W5JJA0_ANODA/162-265; 2OG-Fe(II) oxygenase superfamily 91 COG1018 1-91 -53.400 35  [B] KOG3844 Predicted component of NuA3 histone acetyltransferase complex
23 PF13759.6; Q1GR96_SPHAL/97-197; Putative 2OG-Fe(II) oxygenase 101 COG1018 4-99 -20.100 13  [S] COG3826 Uncharacterized protein conserved in bacteria
24 PF10014.9; A9IE89_BORPD/63-254; 2OG-Fe dioxygenase 192 COG1018 1-192 -93.100 25  [S] COG4340 Uncharacterized protein conserved in bacteria
25 PF13239.6; G2PR51_MURRD/10-91; 2TM domain 82 COG1018 1-79 -7.750 [S] COG5336 Uncharacterized protein conserved in bacteria
26 PF13563.6; B7GEI9_PHATC/21-202; 2'-5' RNA ligase superfamily 182 COG1018 1-179 -37.400 16  [J] COG1514 2`-5` RNA ligase
27 PF03475.14; Q9I607_PSEAE/170-213; 3-alpha domain 44 COG1018 2-44 -10.200 25  [S] COG2258 Uncharacterized protein conserved in bacteria
28 PF06983.13; Q98C01_RHILO/2-116; 3-demethylubiquinone-9 3-methyltransferase 115 COG1018 1-115 -72.700 100  [S] COG3865 Uncharacterized protein conserved in bacteria
29 PF06052.12; 3HAO_YEAST/1-155; 3-hydroxyanthranilic acid dioxygenase 155 COG1018 1-127 -25.200 15  [G] COG4101 Predicted mannose-6-phosphate isomerase
30 PF12578.8; M3YI62_MUSPF/565-696; Myotubularin-associated protein 132 COG1018 1-132 -9.690 14  [R] KOG1089 Myotubularin-related phosphatidylinositol 3-phosphate 3-phosphatase MTM6
31 PF17644.1; VP54_CPSVP/90-227; Core domain of 30K viral movement proteins 138 COG1018 36-130 -5.980 [O] COG1765 Predicted redox protein, regulator of disulfide bond formation
32 PF11330.8; VP54_CPSVP/234-475; C-Terminal of 30K viral movement proteins 242 COG1018 1-242 -6.910 12  [T] COG3605 Signal transduction protein containing GAF and PtsI domains
33 PF00803.18; MVP_BMV/20-244; 3A/RNA2 movement protein family 225 COG1018 85-184 -5.850 12  [C] COG2033 Desulfoferrodoxin
34 PF01073.19; O22813_ARATH/15-299; 3-beta hydroxysteroid dehydrogenase/isomerase family 285 COG1018 1-285 -66.100 22  [IE] KOG1430 C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases
35 PF06725.11; Q46212_CLOPF/19-80; 3D domain 62 COG1018 1-62 -34.800 51  [S] COG3584 Uncharacterized protein conserved in bacteria
36 PF02829.14; R5TFM1_9FIRM/75-171; 3H domain 97 COG1018 1-97 -41.000 22  [R] COG1827 Predicted small molecule binding protein (contains 3H domain)
37 PF10605.9; HBOH_BURPS/23-698; 3HB-oligomer hydrolase (3HBOH) 676 COG1018 106-630 -9.990 11  [OE] KOG1282 Serine carboxypeptidases (lysosomal cathepsin A)
193-624 -10.300 10  [R] KOG4840 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
38 PF00725.22; O29062_ARCFU/188-281; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 94 COG1018 1-94 -26.800 22  [I] COG1250 3-hydroxyacyl-CoA dehydrogenase
39 PF02737.18; Q2YR99_BRUA2/5-183; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 179 COG1018 1-179 -75.300 71  [I] COG1250 3-hydroxyacyl-CoA dehydrogenase
40 PF18321.1; J3HZ34_9BURK/351-418; 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain 68 COG1018 1-64 -6.480 21  [I] COG0558 Phosphatidylglycerophosphate synthase


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.