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Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:

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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 21-40 of 4725< prev pagenext page >

# Query Length Result vs. Range Score %id Covered by template(s)
21 gi|16763411|ref|NP_459026.1|(removed signalp:1-24) fimbrial subunit (STM0021) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] (Range: 25-180) 156 NEW_HUMAN_DOMAINS 10-143 -6.020 13  sp|Q9GZN8|CT027_HUMAN UPF0687 protein C20orf27 OS=Homo sapiens GN=C20orf27 PE=1 SV=3 (Range: 30-174)
22 gi|16763412|ref|NP_459027.1|(removed signalp:1-26) fimbrial chaperone (STM0022) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] (Range: 27-228) 202 NEW_HUMAN_DOMAINS 1-150 -7.500 10  sp|Q9BVM2|DPCD_HUMAN Protein DPCD OS=Homo sapiens GN=DPCD PE=1 SV=2 (Range: 1-180)
23 gi|16763413|ref|NP_459028.1|(removed signalp:1-35) fimbrial usher (STM0023) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] (Range: 36-873) 838 NEW_HUMAN_DOMAINS 256-327 -4.850 12  tr|E7ENW6|E7ENW6_HUMAN Uncharacterized protein OS=Homo sapiens GN=TRAPPC8 PE=4 SV=1 (Range: 1-80)
24 gi|16763414|ref|NP_459029.1|(removed signalp:1-21) fimbrial subunit (STM0024) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] (Range: 22-335) 314 NEW_HUMAN_DOMAINS 178-314 -6.120 12  sp|Q5VU65|P210L_HUMAN Nuclear pore membrane glycoprotein 210-like OS=Homo sapiens GN=NUP210L PE=2 SV=1 (Range: 716-825)
25 gi|16763415|ref|NP_459030.1|(removed signalp:1-23) fimbrial subunit (STM0025) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] (Range: 24-181) 158 NEW_HUMAN_DOMAINS 6-130 -6.810 15  sp|Q5H8C1|FREM1_HUMAN FRAS1-related extracellular matrix protein 1 OS=Homo sapiens GN=FREM1 PE=1 SV=3 (Range: 30-186)
26 gi|16763416|ref|NP_459031.1|(removed signalp:1-20) fimbrial subunit (STM0026) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] (Range: 21-172) 152 NEW_HUMAN_DOMAINS 4-96 -5.300 11  sp|Q96GM5|SMRD1_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 OS=Homo sapiens GN=SMARCD1 PE=1 SV=2 (Range: 134-290)
27 gi|16763417|ref|NP_459032.1| fimbrial chaperone (STM0027) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] (Range: 1-243) 243 NEW_HUMAN_DOMAINS 24-183 -6.680 13  sp|Q9BVM2|DPCD_HUMAN Protein DPCD OS=Homo sapiens GN=DPCD PE=1 SV=2 (Range: 1-180)
28 gi|16763418|ref|NP_459033.1|(removed signalp:1-27) thiol-disulfide isomerase (STM0028) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] (Range: 28-281) 254 NEW_HUMAN_DOMAINS 92-150 -8.850 16  sp|Q7Z2T5|TRM1L_HUMAN TRMT1-like protein OS=Homo sapiens GN=TRMT1L PE=1 SV=2 (Range: 116-201)
29 gi|39546288|ref|NP_945153.1| hypothetical protein (STM0028.1n) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] (Range: 1-109) 109 NEW_HUMAN_DOMAINS 1-52 -5.970 sp|Q9BZC7|ABCA2_HUMAN ATP-binding cassette sub-family A member 2 OS=Homo sapiens GN=ABCA2 PE=1 SV=3 (Range: 1428-1583)
30 gi|16763419|ref|NP_459034.1| transcriptional regulator (STM0029) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] (Range: 1-149) 149 NEW_HUMAN_DOMAINS 1-97 -6.200 12  sp|Q70CQ2|UBP34_HUMAN Ubiquitin carboxyl-terminal hydrolase 34 OS=Homo sapiens GN=USP34 PE=1 SV=2 (Range: 151-468)
31 gi|16763420|ref|NP_459035.1| transcriptional regulator (STM0030) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] (Range: 1-334) 334 NEW_HUMAN_DOMAINS 1-117 -4.890 15  sp|Q6ZMJ4|IL34_HUMAN Interleukin-34 OS=Homo sapiens GN=IL34 PE=1 SV=1 (Range: 21-190)
32 gi|16763421|ref|NP_459036.1| transcriptional regulator (STM0031) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] (Range: 1-146) 146 NEW_HUMAN_DOMAINS 8-104 -6.190 10  sp|Q8WUJ3|K1199_HUMAN Protein KIAA1199 OS=Homo sapiens GN=KIAA1199 PE=1 SV=2 (Range: 166-323)
33 gi|16763422|ref|NP_459037.1| arylsulfatase (STM0032) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] (Range: 1-572) 572 NEW_HUMAN_DOMAINS 59-286 -5.610 11  sp|Q8N766|K0090_HUMAN Uncharacterized protein KIAA0090 OS=Homo sapiens GN=KIAA0090 PE=1 SV=1 (Range: 565-785)
34 gi|16763423|ref|NP_459038.1|(removed signalp:1-29) 5'-nucleotidase (STM0033) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] (Range: 30-523) 494 NEW_HUMAN_DOMAINS 379-443 -3.970 22  sp|Q9BXF9|TEKT3_HUMAN Tektin-3 OS=Homo sapiens GN=TEKT3 PE=1 SV=1 (Range: 1-98)
35 gi|16763424|ref|NP_459039.1|(removed signalp:1-24) outer membrane/exported protein (STM0034) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] (Range: 25-253) 229 NEW_HUMAN_DOMAINS 198-229 -5.490 tr|F8VRI9|F8VRI9_HUMAN Uncharacterized protein OS=Homo sapiens GN=TCTN1 PE=4 SV=1 (Range: 1-87)
36 gi|16763425|ref|NP_459040.1|(removed signalp:1-25) arylsulfatase (STM0035) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] (Range: 26-497) 472 NEW_HUMAN_DOMAINS 8-65 -6.940 34  sp|Q14674|ESPL1_HUMAN Separin OS=Homo sapiens GN=ESPL1 PE=1 SV=3 (Range: 1214-1295)
37 gi|16763426|ref|NP_459041.1| arylsulfatase regulator (STM0036) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] (Range: 1-396) 396 NEW_HUMAN_DOMAINS 36-128 -4.940 12  sp|Q6ZRS4|CC129_HUMAN Coiled-coil domain-containing protein 129 OS=Homo sapiens GN=CCDC129 PE=2 SV=2 (Range: 705-836)
38 gi|16763427|ref|NP_459042.1| cytoplasmic protein (STM0037) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] (Range: 1-417) 417 NEW_HUMAN_DOMAINS 35-108 -11.300 16  sp|Q9H2P0|ADNP_HUMAN Activity-dependent neuroprotector homeobox protein OS=Homo sapiens GN=ADNP PE=1 SV=1 (Range: 446-529)
39 gi|16763428|ref|NP_459043.1| arylsulfatase (STM0038) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] (Range: 1-571) 571 NEW_HUMAN_DOMAINS 59-286 -5.500 sp|Q8N766|K0090_HUMAN Uncharacterized protein KIAA0090 OS=Homo sapiens GN=KIAA0090 PE=1 SV=1 (Range: 565-785)
40 gi|16763429|ref|NP_459044.1| pH-dependent sodium/proton antiporter (STM0039) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] (Range: 1-388) 388 NEW_HUMAN_DOMAINS 62-133 -5.130 18  sp|A6NCN8|YL021_HUMAN Uncharacterized protein ENSP00000372125 OS=Homo sapiens PE=4 SV=2 (Range: 144-249)


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Sasin JM, Godzik A, Bujnicki JM. SURF'S UP! - protein classification by surface comparisons. J Biosci. 2007 Jan;32(1):97-100.