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Results: 1-20 of 14323next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 d1dlwa_ a.1.1.1 (A:) Protozoan/bacterial hemoglobin {Ciliate (Paramecium caudatum) [TaxId: 5885]} 116 COG1018 1-115 -56.200 24  [R] COG2346 Truncated hemoglobins
CSGID 9-115 -8.330 15  IDP00562 gene: hmp; nitric oxide dioxygenase YPO2908 [Yersinia pestis CO92]
H.sapiens 9-116 -7.990 19  sp|Q9NPG2|NGB_HUMAN Neuroglobin OS=Homo sapiens GN=NGB PE=1 SV=1
HGM_OVER 32-112 -4.020 10  PB027498 Q7MTK6_PORGI/1-146 PB027498; Pfam-B_27498;
NEW_HUMAN_DOMAINS 1-79 -5.610 15  sp|Q8WVM7|STAG1_HUMAN Cohesin subunit SA-1 OS=Homo sapiens GN=STAG1 PE=1 SV=3 (Range: 73-156)
PDB1018 1-116 -68.000 100  1dlw_A mol:protein length:116 HEMOGLOBIN
PfamA32U 1-115 -59.600 24  PF01152.21; Q7CX73_AGRFC/7-127; Bacterial-like globin
SCOP207 1-115 -65.100 34  d2gkma_ a.1.1.1 (A:) Protozoan/bacterial hemoglobin {Mycobacterium tuberculosis, HbN [TaxId: 1773]}
VFDB 1-115 -56.200 24  [R] COG2346 Truncated hemoglobins
2 d2gkma_ a.1.1.1 (A:) Protozoan/bacterial hemoglobin {Mycobacterium tuberculosis, HbN [TaxId: 1773]} 127 COG1018 1-127 -58.200 15  [R] COG2346 Truncated hemoglobins
CSGID 2-127 -7.700 14  IDP00562 gene: hmp; nitric oxide dioxygenase YPO2908 [Yersinia pestis CO92]
H.sapiens 3-127 -8.140 13  sp|P69891|HBG1_HUMAN Hemoglobin subunit gamma-1 OS=Homo sapiens GN=HBG1 PE=1 SV=2
HGM_OVER 44-124 -4.400 11  PB027498 Q7MTK6_PORGI/1-146 PB027498; Pfam-B_27498;
NEW_HUMAN_DOMAINS 1-91 -7.330 16  sp|Q8WVM7|STAG1_HUMAN Cohesin subunit SA-1 OS=Homo sapiens GN=STAG1 PE=1 SV=3 (Range: 73-156)
PDB1018 1-127 -67.900 99  2gl3_A mol:protein length:136 Hemoglobin-like protein HbN
PfamA32U 13-127 -59.300 15  PF01152.21; Q7CX73_AGRFC/7-127; Bacterial-like globin
SCOP207 13-127 -65.100 34  d1dlwa_ a.1.1.1 (A:) Protozoan/bacterial hemoglobin {Ciliate (Paramecium caudatum) [TaxId: 5885]}
VFDB 1-127 -58.200 15  [R] COG2346 Truncated hemoglobins
3 d1ngka_ a.1.1.1 (A:) Protozoan/bacterial hemoglobin {Mycobacterium tuberculosis, HbO [TaxId: 1773]} 126 COG1018 1-125 -61.700 32  [R] COG2346 Truncated hemoglobins
CSGID 10-124 -8.800 IDP01484 nitric oxide dioxygenase VCA0183 [Vibrio cholerae O1 biovar El Tor str. N16961]
H.sapiens 10-123 -9.820 sp|Q9NPG2|NGB_HUMAN Neuroglobin OS=Homo sapiens GN=NGB PE=1 SV=1
HGM_OVER 1-124 -3.730 PB047496 gi|150008556|ref|YP_001303299.1| hypothetical protein BDI_1942 [Parabacteroides distasonis ATCC 8503]gi|149936980|gb|ABR43677.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503]
NEW_HUMAN_DOMAINS 3-119 -6.030 11  sp|Q9Y2D4|EXC6B_HUMAN Exocyst complex component 6B OS=Homo sapiens GN=EXOC6B PE=1 SV=3 (Range: 287-418)
PDB1018 1-126 -71.600 100  1ngk_A mol:protein length:128 Hemoglobin-like protein HbO
PfamA32U 2-123 -62.200 33  PF01152.21; Q7CX73_AGRFC/7-127; Bacterial-like globin
SCOP207 1-125 -60.100 38  d2bkma_ a.1.1.1 (A:) automated matches {Geobacillus stearothermophilus [TaxId: 1422]}
VFDB 1-125 -61.700 32  [R] COG2346 Truncated hemoglobins
4 d2bkma_ a.1.1.1 (A:) automated matches {Geobacillus stearothermophilus [TaxId: 1422]} 128 COG1018 1-127 -62.500 40  [R] COG2346 Truncated hemoglobins
CSGID 13-127 -9.300 16  IDP01484 nitric oxide dioxygenase VCA0183 [Vibrio cholerae O1 biovar El Tor str. N16961]
H.sapiens 13-127 -8.480 11  sp|Q9NPG2|NGB_HUMAN Neuroglobin OS=Homo sapiens GN=NGB PE=1 SV=1
HGM_OVER 2-121 -3.790 14  PB044572 Q8A533_BACTN/1-343 PB044572; Pfam-B_44572;
NEW_HUMAN_DOMAINS 20-100 -5.810 13  sp|P78527|PRKDC_HUMAN DNA-dependent protein kinase catalytic subunit OS=Homo sapiens GN=PRKDC PE=1 SV=3 (Range: 2923-3023)
PDB1018 1-128 -72.300 100  2bkm_A mol:protein length:128 TRUNCATED HEMOGLOBIN FROM GEOBACILLUS STEAROTHERMOPHILUS
PfamA32U 5-122 -63.700 43  PF01152.21; Q7CX73_AGRFC/7-127; Bacterial-like globin
SCOP207 4-124 -60.100 38  d1ngka_ a.1.1.1 (A:) Protozoan/bacterial hemoglobin {Mycobacterium tuberculosis, HbO [TaxId: 1773]}
VFDB 1-127 -62.500 40  [R] COG2346 Truncated hemoglobins
5 d4i0va_ a.1.1.1 (A:) automated matches {Synechococcus sp. [TaxId: 32049]} 123 COG1018 1-123 -56.200 17  [R] COG2346 Truncated hemoglobins
CSGID 7-120 -7.910 12  IDP92744 hypothetical protein lpp1221 [Legionella pneumophila str. Paris] YP_123545 [Legionella pneumophila str. Paris]
H.sapiens 3-123 -7.290 sp|Q3KRA6|CB076_HUMAN UPF0538 protein C2orf76 OS=Homo sapiens GN=C2orf76 PE=2 SV=3
HGM_OVER 33-117 -4.690 PB027498 Q7MTK6_PORGI/1-146 PB027498; Pfam-B_27498;
NEW_HUMAN_DOMAINS 2-116 -5.690 12  sp|Q5TH69|BIG3_HUMAN Brefeldin A-inhibited guanine nucleotide-exchange protein 3 OS=Homo sapiens GN=ARFGEF3 PE=1 SV=3 (Range: 296-445)
PDB1018 1-123 -71.400 100  2ksc_A mol:protein length:123 Cyanoglobin
PfamA32U 2-122 -58.100 17  PF01152.21; Q7CX73_AGRFC/7-127; Bacterial-like globin
SCOP207 1-123 -64.200 38  d6bmea_ a.1.1.0 (A:) automated matches {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]}
VFDB 1-123 -56.200 17  [R] COG2346 Truncated hemoglobins
6 d1asha_ a.1.1.2 (A:) Ascaris hemoglobin, domain 1 {Pig roundworm (Ascaris suum) [TaxId: 6253]} 147 COG1018 1-147 -43.200 10  [C] COG1017 Hemoglobin-like flavoprotein
CSGID 1-147 -34.200 12  IDP01484 nitric oxide dioxygenase VCA0183 [Vibrio cholerae O1 biovar El Tor str. N16961]
H.sapiens 1-147 -50.900 17  sp|Q9NPG2|NGB_HUMAN Neuroglobin OS=Homo sapiens GN=NGB PE=1 SV=1
HGM_OVER 1-65 -6.040 14  PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]
NEW_HUMAN_DOMAINS 27-147 -8.570 sp|Q8IX21|F178A_HUMAN Protein FAM178A OS=Homo sapiens GN=FAM178A PE=1 SV=2 (Range: 727-883)
PDB1018 1-147 -64.900 100  1ash_A mol:protein length:150 HEMOGLOBIN (OXY)
PfamA32U 1-147 -11.300 10  PF11563.8; F0XJU9_GROCL/20-199; Protoglobin
4-107 -39.200 13  PF00042.22; GLB8_CHITH/9-115; Globin
SCOP207 1-147 -56.500 39  d2wtga_ a.1.1.0 (A:) automated matches {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
VFDB 1-147 -43.200 10  [C] COG1017 Hemoglobin-like flavoprotein
7 d2dc3a_ a.1.1.2 (A:) Cytoglobin {Human (Homo sapiens) [TaxId: 9606]} 172 COG1018 3-160 -50.300 16  [C] COG1017 Hemoglobin-like flavoprotein
CSGID 3-160 -41.600 12  IDP01484 nitric oxide dioxygenase VCA0183 [Vibrio cholerae O1 biovar El Tor str. N16961]
H.sapiens 2-172 -68.200 100  sp|Q8WWM9|CYGB_HUMAN Cytoglobin OS=Homo sapiens GN=CYGB PE=1 SV=1
HGM_OVER 1-59 -5.940 PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]
NEW_HUMAN_DOMAINS 4-153 -7.640 10  sp|Q5TH69|BIG3_HUMAN Brefeldin A-inhibited guanine nucleotide-exchange protein 3 OS=Homo sapiens GN=ARFGEF3 PE=1 SV=3 (Range: 1440-1626)
PDB1018 2-172 -68.300 98  1umo_A mol:protein length:190 CYTOGLOBIN
PfamA32U 2-156 -13.300 13  PF11563.8; F0XJU9_GROCL/20-199; Protoglobin
7-116 -37.100 17  PF00042.22; GLB8_CHITH/9-115; Globin
SCOP207 2-157 -62.100 30  d1naza_ a.1.1.2 (A:) Myoglobin {Sperm whale (Physeter catodon) [TaxId: 9755]}
VFDB 3-160 -50.300 16  [C] COG1017 Hemoglobin-like flavoprotein
8 d4hswa_ a.1.1.2 (A:) Dehaloperoxidase {Amphitrite ornata [TaxId: 129555]} 137 COG1018 2-137 -42.500 12  [C] COG1017 Hemoglobin-like flavoprotein
CSGID 2-137 -32.600 12  IDP01484 nitric oxide dioxygenase VCA0183 [Vibrio cholerae O1 biovar El Tor str. N16961]
H.sapiens 2-137 -50.300 15  sp|Q9NPG2|NGB_HUMAN Neuroglobin OS=Homo sapiens GN=NGB PE=1 SV=1
HGM_OVER 21-133 -5.520 11  PB019388 gi|83589066|ref|YP_429075.1| Radical SAM [Moorella thermoacetica ATCC 39073]gi|83571980|gb|ABC18532.1| Radical SAM [Moorella thermoacetica ATCC 39073]
NEW_HUMAN_DOMAINS 17-133 -8.440 sp|Q8IX21|F178A_HUMAN Protein FAM178A OS=Homo sapiens GN=FAM178A PE=1 SV=2 (Range: 727-883)
PDB1018 1-137 -61.800 100  4hsw_A mol:protein length:137 Dehaloperoxidase A
PfamA32U 2-105 -40.100 23  PF00042.22; GLB8_CHITH/9-115; Globin
2-137 -10.400 PF11563.8; F0XJU9_GROCL/20-199; Protoglobin
SCOP207 2-136 -55.100 17  d1mbaa_ a.1.1.2 (A:) Myoglobin {Slug sea hare (Aplysia limacina) [TaxId: 6502]}
VFDB 2-137 -42.500 12  [C] COG1017 Hemoglobin-like flavoprotein
9 d1ecaa_ a.1.1.2 (A:) Erythrocruorin {Midge (Chironomus thummi thummi), fraction III [TaxId: 7154]} 136 COG1018 1-135 -41.000 13  [C] COG1017 Hemoglobin-like flavoprotein
CSGID 1-135 -34.400 11  IDP01484 nitric oxide dioxygenase VCA0183 [Vibrio cholerae O1 biovar El Tor str. N16961]
H.sapiens 1-136 -49.900 19  sp|P02144|MYG_HUMAN Myoglobin OS=Homo sapiens GN=MB PE=1 SV=2
HGM_OVER 63-111 -4.770 HGC00915 gi|162810474|dbj|BABA01034235.1|2.0 TMP01234;
NEW_HUMAN_DOMAINS 27-136 -7.340 sp|Q8TAG9|EXOC6_HUMAN Exocyst complex component 6 OS=Homo sapiens GN=EXOC6 PE=1 SV=3 (Range: 280-409)
PDB1018 1-136 -62.000 100  1eca_A mol:protein length:136 ERYTHROCRUORIN (AQUO MET)
PfamA32U 1-135 -11.000 PF11563.8; F0XJU9_GROCL/20-199; Protoglobin
5-105 -43.200 50  PF00042.22; GLB8_CHITH/9-115; Globin
SCOP207 1-136 -54.100 34  d1x46a_ a.1.1.0 (A:) automated matches {Tokunagayusurika akamusi [TaxId: 28383]}
VFDB 1-135 -41.000 13  [C] COG1017 Hemoglobin-like flavoprotein
10 d1x9fd_ a.1.1.2 (D:) Extracellular dodecameric hemoglobin (erythrocruorin), subunit D1 {Common earthworm (Lumbricus terrestris) [TaxId: 6398]} 140 COG1018 2-139 -46.500 15  [C] COG1017 Hemoglobin-like flavoprotein
CSGID 2-139 -37.000 15  IDP01484 nitric oxide dioxygenase VCA0183 [Vibrio cholerae O1 biovar El Tor str. N16961]
H.sapiens 2-140 -54.200 20  sp|Q9NPG2|NGB_HUMAN Neuroglobin OS=Homo sapiens GN=NGB PE=1 SV=1
HGM_OVER 8-110 -5.430 10  PB012991 Q2RHT0_MOOTA/1-175 PB012991; Pfam-B_12991;
NEW_HUMAN_DOMAINS 5-140 -6.610 12  sp|Q86UK0|ABCAC_HUMAN ATP-binding cassette sub-family A member 12 OS=Homo sapiens GN=ABCA12 PE=1 SV=3 (Range: 730-927)
PDB1018 1-140 -65.600 100  1x9f_D mol:protein length:140 hemoglobin chain d1
PfamA32U 6-112 -37.700 18  PF00042.22; GLB8_CHITH/9-115; Globin
SCOP207 1-140 -61.900 36  d2zs0b_ a.1.1.0 (B:) automated matches {Oligobrachia mashikoi [TaxId: 55676]}
VFDB 2-139 -46.500 15  [C] COG1017 Hemoglobin-like flavoprotein
11 d1x9fc_ a.1.1.2 (C:) Extracellular dodecameric hemoglobin (erythrocruorin), subunit III (globin C) {Common earthworm (Lumbricus terrestris) [TaxId: 6398]} 149 COG1018 5-148 -45.700 13  [C] COG1017 Hemoglobin-like flavoprotein
CSGID 4-148 -36.200 15  IDP01484 nitric oxide dioxygenase VCA0183 [Vibrio cholerae O1 biovar El Tor str. N16961]
H.sapiens 5-149 -52.200 19  sp|Q8WWM9|CYGB_HUMAN Cytoglobin OS=Homo sapiens GN=CYGB PE=1 SV=1
HGM_OVER 6-147 -4.890 PB007147 Q11UU2_CYTH3/1-245 PB007147; Pfam-B_7147;
NEW_HUMAN_DOMAINS 14-96 -8.080 10  sp|Q96EV8|DTBP1_HUMAN Dysbindin OS=Homo sapiens GN=DTNBP1 PE=1 SV=1 (Range: 44-146)
PDB1018 1-149 -63.500 100  1x9f_C mol:protein length:153 Globin III, extracellular
PfamA32U 9-119 -35.200 22  PF00042.22; GLB8_CHITH/9-115; Globin
SCOP207 2-149 -59.600 34  d2zs0c_ a.1.1.0 (C:) automated matches {Oligobrachia mashikoi [TaxId: 55676]}
VFDB 5-148 -45.700 13  [C] COG1017 Hemoglobin-like flavoprotein
12 d1jl7a_ a.1.1.2 (A:) Glycera globin {Marine bloodworm (Glycera dibranchiata) [TaxId: 6350]} 147 COG1018 2-147 -54.500 18  [C] COG1017 Hemoglobin-like flavoprotein
CSGID 2-147 -48.200 15  IDP01484 nitric oxide dioxygenase VCA0183 [Vibrio cholerae O1 biovar El Tor str. N16961]
H.sapiens 2-147 -60.200 20  sp|Q9NPG2|NGB_HUMAN Neuroglobin OS=Homo sapiens GN=NGB PE=1 SV=1
HGM_OVER 3-45 -5.590 11  PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]
NEW_HUMAN_DOMAINS 12-147 -6.260 sp|Q5T2E6|CJ076_HUMAN UPF0668 protein C10orf76 OS=Homo sapiens GN=C10orf76 PE=2 SV=1 (Range: 26-318)
PDB1018 1-147 -73.000 100  1jf3_A mol:protein length:147 monomer hemoglobin component III
PfamA32U 1-147 -11.200 11  PF11563.8; F0XJU9_GROCL/20-199; Protoglobin
6-111 -33.600 17  PF00042.22; GLB8_CHITH/9-115; Globin
SCOP207 4-147 -59.300 20  d1q1fa_ a.1.1.2 (A:) Neuroglobin {Mouse (Mus musculus) [TaxId: 10090]}
VFDB 2-147 -54.500 18  [C] COG1017 Hemoglobin-like flavoprotein
13 d1it2a_ a.1.1.2 (A:) Hagfish hemoglobin {Inshore hagfish (Eptatretus burgeri) [TaxId: 7764]} 146 COG1018 11-146 -42.500 13  [C] COG1017 Hemoglobin-like flavoprotein
CSGID 11-146 -36.200 16  IDP01484 nitric oxide dioxygenase VCA0183 [Vibrio cholerae O1 biovar El Tor str. N16961]
H.sapiens 2-146 -53.400 22  sp|Q8WWM9|CYGB_HUMAN Cytoglobin OS=Homo sapiens GN=CYGB PE=1 SV=1
HGM_OVER 4-65 -5.840 PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]
NEW_HUMAN_DOMAINS 16-120 -6.160 11  sp|Q5TIA1|MEI1_HUMAN Meiosis inhibitor protein 1 OS=Homo sapiens GN=MEI1 PE=2 SV=2 (Range: 345-464)
PDB1018 1-146 -69.800 100  1it2_A mol:protein length:146 hemoglobin
PfamA32U 7-146 -12.400 10  PF11563.8; F0XJU9_GROCL/20-199; Protoglobin
15-122 -38.300 20  PF00042.22; GLB8_CHITH/9-115; Globin
SCOP207 10-146 -53.600 23  d2dc3a_ a.1.1.2 (A:) Cytoglobin {Human (Homo sapiens) [TaxId: 9606]}
VFDB 11-146 -42.500 13  [C] COG1017 Hemoglobin-like flavoprotein
14 d1or4a_ a.1.1.2 (A:) Heme-based aerotactic transducer HemAT, sensor domain {Bacillus subtilis [TaxId: 1423]} 169 COG1018 34-160 -16.700 16  [C] COG1017 Hemoglobin-like flavoprotein
CSGID 34-160 -14.600 15  IDP00562 gene: hmp; nitric oxide dioxygenase YPO2908 [Yersinia pestis CO92]
H.sapiens 34-169 -12.800 11  sp|Q9NPG2|NGB_HUMAN Neuroglobin OS=Homo sapiens GN=NGB PE=1 SV=1
HGM_OVER 30-139 -2.610 11  HGC00690 gi|162868815|dbj|BABB01001192.1|3.0 TMP00870;
NEW_HUMAN_DOMAINS 18-139 -6.680 11  sp|A8MV24|CQ098_HUMAN Uncharacterized protein C17orf98 OS=Homo sapiens GN=C17orf98 PE=4 SV=1 (Range: 1-154)
PDB1018 1-169 -72.900 100  1or4_A mol:protein length:178 Heme-based aerotactic transducer hemAT
PfamA32U 22-169 -54.600 11  PF11563.8; F0XJU9_GROCL/20-199; Protoglobin
SCOP207 35-160 -17.200 14  d2wy4a_ a.1.1.0 (A:) automated matches {Campylobacter jejuni [TaxId: 197]}
VFDB 34-160 -16.700 16  [C] COG1017 Hemoglobin-like flavoprotein
15 d1itha_ a.1.1.2 (A:) Hemoglobin {Innkeeper worm (Urechis caupo) [TaxId: 6431]} 141 COG1018 2-140 -44.100 16  [C] COG1017 Hemoglobin-like flavoprotein
CSGID 2-140 -32.700 16  IDP00562 gene: hmp; nitric oxide dioxygenase YPO2908 [Yersinia pestis CO92]
H.sapiens 1-140 -52.700 20  sp|P69892|HBG2_HUMAN Hemoglobin subunit gamma-2 OS=Homo sapiens GN=HBG2 PE=1 SV=2
HGM_OVER 3-58 -5.350 12  PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]
NEW_HUMAN_DOMAINS 50-141 -7.310 11  sp|Q6UWF9|F180A_HUMAN Protein FAM180A OS=Homo sapiens GN=FAM180A PE=2 SV=1 (Range: 67-173)
PDB1018 1-141 -67.000 100  1ith_A mol:protein length:141 HEMOGLOBIN (CYANO MET)
PfamA32U 1-137 -12.500 10  PF11563.8; F0XJU9_GROCL/20-199; Protoglobin
6-112 -41.900 16  PF00042.22; GLB8_CHITH/9-115; Globin
SCOP207 1-141 -58.200 16  d1mbaa_ a.1.1.2 (A:) Myoglobin {Slug sea hare (Aplysia limacina) [TaxId: 6502]}
VFDB 2-140 -44.100 16  [C] COG1017 Hemoglobin-like flavoprotein
16 d3g46a_ a.1.1.2 (A:) Hemoglobin I {Ark clam (Scapharca inaequivalvis) [TaxId: 6561]} 146 COG1018 10-146 -48.700 18  [C] COG1017 Hemoglobin-like flavoprotein
CSGID 10-146 -38.600 18  IDP01484 nitric oxide dioxygenase VCA0183 [Vibrio cholerae O1 biovar El Tor str. N16961]
H.sapiens 10-146 -56.100 15  sp|Q9NPG2|NGB_HUMAN Neuroglobin OS=Homo sapiens GN=NGB PE=1 SV=1
HGM_OVER 2-63 -6.980 PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]
NEW_HUMAN_DOMAINS 14-146 -6.790 sp|Q8IX21|F178A_HUMAN Protein FAM178A OS=Homo sapiens GN=FAM178A PE=1 SV=2 (Range: 727-883)
PDB1018 1-146 -67.200 99  3uhb_A mol:protein length:146 Globin-1
PfamA32U 8-146 -12.800 10  PF11563.8; F0XJU9_GROCL/20-199; Protoglobin
14-119 -39.400 17  PF00042.22; GLB8_CHITH/9-115; Globin
SCOP207 8-146 -57.400 25  d3pt8a_ a.1.1.0 (A:) automated matches {Clam (Lucina pectinata) [TaxId: 244486]}
VFDB 10-146 -48.700 18  [C] COG1017 Hemoglobin-like flavoprotein
17 d1b0ba_ a.1.1.2 (A:) Hemoglobin I {Clam (Lucina pectinata) [TaxId: 244486]} 142 COG1018 2-141 -47.100 15  [C] COG1017 Hemoglobin-like flavoprotein
CSGID 2-141 -40.300 16  IDP01484 nitric oxide dioxygenase VCA0183 [Vibrio cholerae O1 biovar El Tor str. N16961]
H.sapiens 2-142 -56.200 17  sp|Q9NPG2|NGB_HUMAN Neuroglobin OS=Homo sapiens GN=NGB PE=1 SV=1
HGM_OVER 3-58 -5.190 PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]
NEW_HUMAN_DOMAINS 6-140 -10.800 sp|Q8IX21|F178A_HUMAN Protein FAM178A OS=Homo sapiens GN=FAM178A PE=1 SV=2 (Range: 727-883)
PDB1018 1-142 -67.000 100  1b0b_A mol:protein length:142 HEMOGLOBIN
PfamA32U 1-140 -13.500 11  PF11563.8; F0XJU9_GROCL/20-199; Protoglobin
6-114 -41.400 29  PF00042.22; GLB8_CHITH/9-115; Globin
SCOP207 1-142 -61.100 30  d3pt8a_ a.1.1.0 (A:) automated matches {Clam (Lucina pectinata) [TaxId: 244486]}
VFDB 2-141 -47.100 15  [C] COG1017 Hemoglobin-like flavoprotein
18 d1gcva_ a.1.1.2 (A:) Hemoglobin, alpha-chain {Houndshark (Mustelus griseus) [TaxId: 89020]} 140 COG1018 2-140 -46.900 16  [C] COG1017 Hemoglobin-like flavoprotein
CSGID 2-140 -37.600 18  IDP01484 nitric oxide dioxygenase VCA0183 [Vibrio cholerae O1 biovar El Tor str. N16961]
H.sapiens 1-140 -64.700 36  sp|P09105|HBAT_HUMAN Hemoglobin subunit theta-1 OS=Homo sapiens GN=HBQ1 PE=1 SV=2
HGM_OVER 3-72 -5.910 14  PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]
NEW_HUMAN_DOMAINS 3-140 -6.640 sp|Q13315|ATM_HUMAN Serine-protein kinase ATM OS=Homo sapiens GN=ATM PE=1 SV=3 (Range: 166-365)
PDB1018 1-140 -71.100 100  1gcv_A mol:protein length:140 HEMOGLOBIN
PfamA32U 1-139 -13.600 12  PF11563.8; F0XJU9_GROCL/20-199; Protoglobin
6-106 -35.000 13  PF00042.22; GLB8_CHITH/9-115; Globin
SCOP207 2-140 -64.100 38  d2w72a_ a.1.1.2 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
VFDB 2-140 -46.900 16  [C] COG1017 Hemoglobin-like flavoprotein
19 d3d1kb_ a.1.1.2 (B:) Hemoglobin, beta-chain {Antarctic fish (Trematomus newnesi) [TaxId: 35730]} 146 COG1018 3-146 -40.200 [C] COG1017 Hemoglobin-like flavoprotein
CSGID 3-146 -32.100 10  IDP01484 nitric oxide dioxygenase VCA0183 [Vibrio cholerae O1 biovar El Tor str. N16961]
H.sapiens 1-146 -68.900 47  sp|P02100|HBE_HUMAN Hemoglobin subunit epsilon OS=Homo sapiens GN=HBE1 PE=1 SV=2
HGM_OVER 4-57 -5.620 13  PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]
NEW_HUMAN_DOMAINS 8-146 -7.270 10  sp|Q5T2E6|CJ076_HUMAN UPF0668 protein C10orf76 OS=Homo sapiens GN=C10orf76 PE=2 SV=1 (Range: 26-318)
PDB1018 1-146 -70.100 100  1la6_B mol:protein length:146 Hemoglobin beta-1/2 chain
PfamA32U 1-145 -10.600 11  PF11563.8; F0XJU9_GROCL/20-199; Protoglobin
7-111 -35.800 11  PF00042.22; GLB8_CHITH/9-115; Globin
SCOP207 1-146 -60.800 19  d1naza_ a.1.1.2 (A:) Myoglobin {Sperm whale (Physeter catodon) [TaxId: 9755]}
VFDB 3-146 -40.200 [C] COG1017 Hemoglobin-like flavoprotein
20 d1cg5b_ a.1.1.2 (B:) Hemoglobin, beta-chain {Cartilaginous fish akaei (Dasyatis akajei) [TaxId: 31902]} 141 COG1018 3-139 -47.200 13  [C] COG1017 Hemoglobin-like flavoprotein
CSGID 3-139 -40.200 14  IDP01484 nitric oxide dioxygenase VCA0183 [Vibrio cholerae O1 biovar El Tor str. N16961]
H.sapiens 1-141 -59.900 34  sp|P68871|HBB_HUMAN Hemoglobin subunit beta OS=Homo sapiens GN=HBB PE=1 SV=2
HGM_OVER 4-44 -5.480 14  PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]
NEW_HUMAN_DOMAINS 10-138 -7.260 sp|Q7Z401|MYCPP_HUMAN C-myc promoter-binding protein OS=Homo sapiens GN=DENND4A PE=1 SV=2 (Range: 1715-1863)
PDB1018 1-141 -67.700 100  1cg5_B mol:protein length:141 PROTEIN (HEMOGLOBIN)
PfamA32U 1-140 -13.300 11  PF11563.8; F0XJU9_GROCL/20-199; Protoglobin
7-106 -35.300 18  PF00042.22; GLB8_CHITH/9-115; Globin
SCOP207 1-141 -60.200 36  d1gcvb_ a.1.1.2 (B:) Hemoglobin, beta-chain {Houndshark (Mustelus griseus) [TaxId: 89020]}
VFDB 3-139 -47.200 13  [C] COG1017 Hemoglobin-like flavoprotein


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Godzik A., Rychlewski L. A support vector machine approach to the identification of phosphorylation sites. Cell Mol Biol Lett. 2005;10(1):73-89.