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Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:

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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 14323next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 d1dlwa_ a.1.1.1 (A:) Protozoan/bacterial hemoglobin {Ciliate (Paramecium caudatum) [TaxId: 5885]} 116 PfamA32U 1-115 -59.600 24  PF01152.21; Q7CX73_AGRFC/7-127; Bacterial-like globin
2 d2gkma_ a.1.1.1 (A:) Protozoan/bacterial hemoglobin {Mycobacterium tuberculosis, HbN [TaxId: 1773]} 127 PfamA32U 13-127 -59.300 15  PF01152.21; Q7CX73_AGRFC/7-127; Bacterial-like globin
3 d1ngka_ a.1.1.1 (A:) Protozoan/bacterial hemoglobin {Mycobacterium tuberculosis, HbO [TaxId: 1773]} 126 PfamA32U 2-123 -62.200 33  PF01152.21; Q7CX73_AGRFC/7-127; Bacterial-like globin
4 d2bkma_ a.1.1.1 (A:) automated matches {Geobacillus stearothermophilus [TaxId: 1422]} 128 PfamA32U 5-122 -63.700 43  PF01152.21; Q7CX73_AGRFC/7-127; Bacterial-like globin
5 d4i0va_ a.1.1.1 (A:) automated matches {Synechococcus sp. [TaxId: 32049]} 123 PfamA32U 2-122 -58.100 17  PF01152.21; Q7CX73_AGRFC/7-127; Bacterial-like globin
6 d1asha_ a.1.1.2 (A:) Ascaris hemoglobin, domain 1 {Pig roundworm (Ascaris suum) [TaxId: 6253]} 147 PfamA32U 1-147 -11.300 10  PF11563.8; F0XJU9_GROCL/20-199; Protoglobin
4-107 -39.200 13  PF00042.22; GLB8_CHITH/9-115; Globin
7 d2dc3a_ a.1.1.2 (A:) Cytoglobin {Human (Homo sapiens) [TaxId: 9606]} 172 PfamA32U 2-156 -13.300 13  PF11563.8; F0XJU9_GROCL/20-199; Protoglobin
7-116 -37.100 17  PF00042.22; GLB8_CHITH/9-115; Globin
8 d4hswa_ a.1.1.2 (A:) Dehaloperoxidase {Amphitrite ornata [TaxId: 129555]} 137 PfamA32U 2-105 -40.100 23  PF00042.22; GLB8_CHITH/9-115; Globin
2-137 -10.400 PF11563.8; F0XJU9_GROCL/20-199; Protoglobin
9 d1ecaa_ a.1.1.2 (A:) Erythrocruorin {Midge (Chironomus thummi thummi), fraction III [TaxId: 7154]} 136 PfamA32U 1-135 -11.000 PF11563.8; F0XJU9_GROCL/20-199; Protoglobin
5-105 -43.200 50  PF00042.22; GLB8_CHITH/9-115; Globin
10 d1x9fd_ a.1.1.2 (D:) Extracellular dodecameric hemoglobin (erythrocruorin), subunit D1 {Common earthworm (Lumbricus terrestris) [TaxId: 6398]} 140 PfamA32U 6-112 -37.700 18  PF00042.22; GLB8_CHITH/9-115; Globin
11 d1x9fc_ a.1.1.2 (C:) Extracellular dodecameric hemoglobin (erythrocruorin), subunit III (globin C) {Common earthworm (Lumbricus terrestris) [TaxId: 6398]} 149 PfamA32U 9-119 -35.200 22  PF00042.22; GLB8_CHITH/9-115; Globin
12 d1jl7a_ a.1.1.2 (A:) Glycera globin {Marine bloodworm (Glycera dibranchiata) [TaxId: 6350]} 147 PfamA32U 1-147 -11.200 11  PF11563.8; F0XJU9_GROCL/20-199; Protoglobin
6-111 -33.600 17  PF00042.22; GLB8_CHITH/9-115; Globin
13 d1it2a_ a.1.1.2 (A:) Hagfish hemoglobin {Inshore hagfish (Eptatretus burgeri) [TaxId: 7764]} 146 PfamA32U 7-146 -12.400 10  PF11563.8; F0XJU9_GROCL/20-199; Protoglobin
15-122 -38.300 20  PF00042.22; GLB8_CHITH/9-115; Globin
14 d1or4a_ a.1.1.2 (A:) Heme-based aerotactic transducer HemAT, sensor domain {Bacillus subtilis [TaxId: 1423]} 169 PfamA32U 22-169 -54.600 11  PF11563.8; F0XJU9_GROCL/20-199; Protoglobin
15 d1itha_ a.1.1.2 (A:) Hemoglobin {Innkeeper worm (Urechis caupo) [TaxId: 6431]} 141 PfamA32U 1-137 -12.500 10  PF11563.8; F0XJU9_GROCL/20-199; Protoglobin
6-112 -41.900 16  PF00042.22; GLB8_CHITH/9-115; Globin
16 d3g46a_ a.1.1.2 (A:) Hemoglobin I {Ark clam (Scapharca inaequivalvis) [TaxId: 6561]} 146 PfamA32U 8-146 -12.800 10  PF11563.8; F0XJU9_GROCL/20-199; Protoglobin
14-119 -39.400 17  PF00042.22; GLB8_CHITH/9-115; Globin
17 d1b0ba_ a.1.1.2 (A:) Hemoglobin I {Clam (Lucina pectinata) [TaxId: 244486]} 142 PfamA32U 1-140 -13.500 11  PF11563.8; F0XJU9_GROCL/20-199; Protoglobin
6-114 -41.400 29  PF00042.22; GLB8_CHITH/9-115; Globin
18 d1gcva_ a.1.1.2 (A:) Hemoglobin, alpha-chain {Houndshark (Mustelus griseus) [TaxId: 89020]} 140 PfamA32U 1-139 -13.600 12  PF11563.8; F0XJU9_GROCL/20-199; Protoglobin
6-106 -35.000 13  PF00042.22; GLB8_CHITH/9-115; Globin
19 d3d1kb_ a.1.1.2 (B:) Hemoglobin, beta-chain {Antarctic fish (Trematomus newnesi) [TaxId: 35730]} 146 PfamA32U 1-145 -10.600 11  PF11563.8; F0XJU9_GROCL/20-199; Protoglobin
7-111 -35.800 11  PF00042.22; GLB8_CHITH/9-115; Globin
20 d1cg5b_ a.1.1.2 (B:) Hemoglobin, beta-chain {Cartilaginous fish akaei (Dasyatis akajei) [TaxId: 31902]} 141 PfamA32U 1-140 -13.300 11  PF11563.8; F0XJU9_GROCL/20-199; Protoglobin
7-106 -35.300 18  PF00042.22; GLB8_CHITH/9-115; Globin


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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Robinson-Rechavi M, Godzik A. Structural Genomics of Thermotoga maritima Proteins Shows that Contact Order Is a Major Determinant of Protein Thermostability. Structure (Camb). 2005 Jun;13(6):857-60.