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Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:

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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 1872next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 TM0001 TM0001 281882 Purified-2001-08-24 41 NEW_HUMAN_DOMAINS 8-34 -4.010 25  sp|Q96M20|CT152_HUMAN Uncharacterized protein C20orf152 OS=Homo sapiens GN=C20orf152 PE=2 SV=2 (Range: 1-78)
2 TM0002 TM0002 281883 Purified-2001-08-29 41 NEW_HUMAN_DOMAINS 6-36 -5.700 25  sp|Q12766|HMGX3_HUMAN HMG domain-containing protein 3 OS=Homo sapiens GN=HMGXB3 PE=2 SV=2 (Range: 1469-1518)
3 TM0003 TM0003 281884 Purified-2001-12-06 40 NEW_HUMAN_DOMAINS 16-40 -5.280 16  sp|O14497|ARI1A_HUMAN AT-rich interactive domain-containing protein 1A OS=Homo sapiens GN=ARID1A PE=1 SV=3 (Range: 1814-1866)
4 TM0004 TM0004 281885 Purified-2004-07-19 31 NEW_HUMAN_DOMAINS 2-29 -5.400 25  sp|Q56UN5|YSK4_HUMAN SPS1/STE20-related protein kinase YSK4 OS=Homo sapiens GN=YSK4 PE=1 SV=1 (Range: 622-678)
5 TM0005 TM0005 281886 Purified-2001-01-30 650 NEW_HUMAN_DOMAINS 169-216 -5.970 sp|Q6P2S7|GNN_HUMAN Tetratricopeptide repeat protein GNN OS=Homo sapiens GN=GNN PE=2 SV=3 (Range: 217-335)
6 TM0006 TM0006 281887 Diffraction|HSQC-2004-07-13 345 NEW_HUMAN_DOMAINS 133-218 -4.930 12  tr|E7EWK8|E7EWK8_HUMAN Uncharacterized protein OS=Homo sapiens GN=PLOD1 PE=4 SV=2 (Range: 19-216)
7 TM0007 TM0007 281888 Purified-2004-07-19 438 NEW_HUMAN_DOMAINS 270-394 -6.430 16  sp|Q86V25|VASH2_HUMAN Vasohibin-2 OS=Homo sapiens GN=VASH2 PE=2 SV=2 (Range: 99-270)
8 TM0008 TM0008 281889 Crystal|NMR-2001-04-01 224 NEW_HUMAN_DOMAINS 35-219 -5.770 11  sp|P35573|GDE_HUMAN Glycogen debranching enzyme OS=Homo sapiens GN=AGL PE=1 SV=3 (Range: 1-183)
9 TM0009 TM0009 281890 Purified-2001-02-14 142 NEW_HUMAN_DOMAINS 26-58 -5.980 15  sp|Q9H4H8|FA83D_HUMAN Protein FAM83D OS=Homo sapiens GN=FAM83D PE=1 SV=3 (Range: 494-585)
10 TM0010 TM0010 281891 Purified-2005-03-03 607 NEW_HUMAN_DOMAINS 456-588 -6.740 13  sp|O75592|MYCB2_HUMAN Probable E3 ubiquitin-protein ligase MYCBP2 OS=Homo sapiens GN=MYCBP2 PE=1 SV=3 (Range: 4233-4375)
11 TM0011 TM0011 281892 Purified-2004-02-02 128 NEW_HUMAN_DOMAINS 31-123 -7.060 11  sp|Q2QL34|MP17L_HUMAN Mpv17-like protein OS=Homo sapiens GN=MPV17L PE=1 SV=1 (Range: 1-104)
12 TM0012 TM0012 281893 Purified-2001-08-29 176 NEW_HUMAN_DOMAINS 39-168 -6.100 12  sp|Q6P1X5|TAF2_HUMAN Transcription initiation factor TFIID subunit 2 OS=Homo sapiens GN=TAF2 PE=1 SV=3 (Range: 708-906)
13 TM0013 TM0013 281894 Purified-2001-08-24 253 NEW_HUMAN_DOMAINS 33-99 -4.420 tr|C9J2F8|C9J2F8_HUMAN HCG22882, isoform CRA_a OS=Homo sapiens GN=PSMG4 PE=4 SV=1 (Range: 1-102)
14 TM0014 TM0014 281895 Purified-2001-01-30 278 NEW_HUMAN_DOMAINS 17-272 -7.750 10  tr|E7EQE5|E7EQE5_HUMAN Uncharacterized protein OS=Homo sapiens GN=DNAH3 PE=4 SV=1 (Range: 191-685)
15 TM0015 TM0015 281896 PDB-2007-09-14 192 NEW_HUMAN_DOMAINS 1-65 -4.760 15  sp|Q9HAT2|SIAE_HUMAN Sialate O-acetylesterase OS=Homo sapiens GN=SIAE PE=1 SV=1 (Range: 19-108)
16 TM0016 TM0016 281897 Purified-2001-08-24 101 NEW_HUMAN_DOMAINS 42-101 -8.880 17  sp|Q8NCS7|CTL5_HUMAN Choline transporter-like protein 5 OS=Homo sapiens GN=SLC44A5 PE=2 SV=2 (Range: 99-240)
17 TM0017 TM0017 281898 Purified-2003-03-05 394 NEW_HUMAN_DOMAINS 11-48 -6.480 27  sp|Q68CZ2|TENS3_HUMAN Tensin-3 OS=Homo sapiens GN=TNS3 PE=1 SV=2 (Range: 774-862)
18 TM0018 TM0018 281899 Purified-2001-08-24 324 NEW_HUMAN_DOMAINS 14-41 -4.920 17  sp|Q92622|RUBIC_HUMAN Run domain Beclin-1 interacting and cystein-rich containing protein OS=Homo sapiens GN=KIAA0226 PE=1 SV=4 (Range: 675-736)
19 TM0019 TM0019 281900 Crystal|NMR-2004-03-31 256 NEW_HUMAN_DOMAINS 33-91 -5.450 15  tr|Q6ZNX1|Q6ZNX1_HUMAN CDNA FLJ26957 fis, clone SLV00486 OS=Homo sapiens PE=2 SV=1 (Range: 176-250)
20 TM0020 TM0020 281901 Purified-2001-08-24 127 NEW_HUMAN_DOMAINS 11-96 -7.160 sp|A6ZKI3|F127A_HUMAN Protein FAM127A OS=Homo sapiens GN=FAM127A PE=1 SV=1 (Range: 30-113)


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.