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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 1872next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 TM0001 TM0001 281882 Purified-2001-08-24 41 PDB1018 10-39 -7.080 26  2jxc_B mol:protein length:45 Stonin-2
2 TM0002 TM0002 281883 Purified-2001-08-29 41 PDB1018 8-35 -5.270 17  5v7q_O mol:protein length:122 50S ribosomal protein L18
3 TM0003 TM0003 281884 Purified-2001-12-06 40 PDB1018 1-40 -4.750 25  4qr0_A mol:protein length:97 CRISPR-associated endoribonuclease Cas2
4 TM0004 TM0004 281885 Purified-2004-07-19 31 PDB1018 4-31 -4.610 10  2yue_A mol:protein length:168 Protein neuralized
5 TM0005 TM0005 281886 Purified-2001-01-30 650 PDB1018 1-649 -135.000 33  4b3f_X mol:protein length:646 DNA-BINDING PROTEIN SMUBP-2
6 TM0006 TM0006 281887 Diffraction|HSQC-2004-07-13 345 PDB1018 1-345 -105.000 100  2zad_A mol:protein length:345 Muconate cycloisomerase
7 TM0007 TM0007 281888 Purified-2004-07-19 438 PDB1018 10-364 -19.900 3kd4_A mol:protein length:506 Putative protease
138-397 -47.000 17  3isr_A mol:protein length:293 Transglutaminase-like enzymes, putative cysteine protease
8 TM0008 TM0008 281889 Crystal|NMR-2001-04-01 224 PDB1018 1-222 -82.400 24  4cob_A mol:protein length:215 KYNURENINE FORMAMIDASE
9 TM0009 TM0009 281890 Purified-2001-02-14 142 PDB1018 1-142 -57.100 31  1vjx_A mol:protein length:157 putative ferritin-like diiron-carboxylate protein TM1526
10 TM0010 TM0010 281891 Purified-2005-03-03 607 PDB1018 1-572 -108.000 30  5xf9_A mol:protein length:591 NAD-reducing hydrogenase
542-606 -18.300 26  1rgv_A mol:protein length:80 ferredoxin
11 TM0011 TM0011 281892 Purified-2004-02-02 128 PDB1018 30-128 -45.800 28  1f37_A mol:protein length:110 FERREDOXIN [2FE-2S]
12 TM0012 TM0012 281893 Purified-2001-08-29 176 PDB1018 16-175 -82.500 27  2fug_2 mol:protein length:181 NADH-quinone oxidoreductase chain 2
13 TM0013 TM0013 281894 Purified-2001-08-24 253 PDB1018 1-240 -72.600 14  4fek_A mol:protein length:262 Putative diflavin flavoprotein A 5
14 TM0014 TM0014 281895 Purified-2001-01-30 278 PDB1018 8-277 -51.800 19  2ch7_A mol:protein length:309 METHYL-ACCEPTING CHEMOTAXIS PROTEIN
41-253 -69.200 100  3g67_A mol:protein length:213 Methyl-accepting chemotaxis protein
15 TM0015 TM0015 281896 PDB-2007-09-14 192 PDB1018 1-192 -85.000 100  2raa_A mol:protein length:204 Pyruvate synthase subunit porC
16 TM0016 TM0016 281897 Purified-2001-08-24 101 PDB1018 1-100 -33.900 30  5xtb_B mol:protein length:176 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial
17 TM0017 TM0017 281898 Purified-2003-03-05 394 PDB1018 6-393 -111.000 34  5c4i_A mol:protein length:395 Oxalate oxidoreductase subunit alpha
18 TM0018 TM0018 281899 Purified-2001-08-24 324 PDB1018 1-320 -87.100 39  5c4i_C mol:protein length:314 Oxalate oxidoreductase subunit beta
19 TM0019 TM0019 281900 Crystal|NMR-2004-03-31 256 PDB1018 2-250 -95.500 31  4gh5_A mol:protein length:269 Short-chain dehydrogenase/reductase SDR
20 TM0020 TM0020 281901 Purified-2001-08-24 127 PDB1018 2-127 -64.200 24  5kom_A mol:protein length:147 Putative fluoride ion transporter CrcB


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Rychlewski L, Zhang B, Godzik A. Functional insights from structural predictions: analysis of the Escherichia coli genome. Protein Sci. 1999 Mar;8(3):614-24.