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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 21-40 of 8581< prev pagenext page >

# Query Length Result vs. Range Score %id Covered by template(s)
21 [G] COG0021 Transketolase 659 HGM_OVER 399-489 -2.980 15  PB010473 Q8A4J5_BACTN/121-234 PB010473; Pfam-B_10473;
22 [C] COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 335 HGM_OVER 207-289 -3.680 14  PB009661 _Gut.Meta.Jp.0000785_ gi|162567239|dbj|BAAU01000237.1||2 (- 3549:4008~0 complete)
23 [J] COG0023 Translation initiation factor 1 (eIF-1/SUI1) and related proteins 108 HGM_OVER 42-104 -5.750 19  PB018258 Q7MT99_PORGI/1-157 PB018258; Pfam-B_18258;
24 [J] COG0024 Methionine aminopeptidase 275 HGM_OVER 1-232 -2.790 HGC00166 gi|163579340|dbj|BABE01005762.1|1.0 TMP00473;
25 [P] COG0025 NhaP-type Na+/H+ and K+/H+ antiporters 549 HGM_OVER 93-164 -5.430 PB040621 Q8A865_BACTN/1-132 PB040621; Pfam-B_40621;
26 [F] COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) 363 HGM_OVER 14-292 -3.190 12  PB002770 Q744K2_MYCPA/1-559 PB002770; Pfam-B_2770;
27 [F] COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) 393 HGM_OVER 7-287 -3.440 PB033130 gi|160880323|ref|YP_001559291.1| transglutaminase domain protein [Clostridium phytofermentans ISDg]gi|160428989|gb|ABX42552.1| transglutaminase domain protein [Clostridium phytofermentans ISDg]
28 [EH] COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 583 HGM_OVER 60-113 -2.890 18  PB155142 _HOMD.0127537_ bfor_c_1_1790 Tannerella forsythia ATCC 43037 [677748 - 680894] ORF
29 [H] COG0029 Aspartate oxidase 536 HGM_OVER 1-208 -3.570 12  PB162065 _Gut.Meta.Jp.0089312_ gi|162832207|dbj|BABA01012502.1||1 (- 0:1326~0 complete)
30 [J] COG0030 Dimethyladenosine transferase (rRNA methylation) 307 HGM_OVER 193-307 -2.110 PB046158 _JGI.0336690_ 2004028347 [Human Gut Community Subject 8]
31 [E] COG0031 Cysteine synthase 324 HGM_OVER 26-89 -2.600 18  PB155142 _HOMD.0127537_ bfor_c_1_1790 Tannerella forsythia ATCC 43037 [677748 - 680894] ORF
32 [G] COG0033 Phosphoglucomutase 542 HGM_OVER 30-295 -2.560 PB001025 Q1QFV3_NITHX/1-288 PB001025; Pfam-B_1025;
33 [F] COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase 499 HGM_OVER 62-191 -3.250 10  PB047496 gi|150008556|ref|YP_001303299.1| hypothetical protein BDI_1942 [Parabacteroides distasonis ATCC 8503]gi|149936980|gb|ABR43677.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503]
34 [F] COG0035 Uracil phosphoribosyltransferase 209 HGM_OVER 116-205 -3.770 13  PB177066 Q891G9_CLOTE/1-159 PB177066; Pfam-B_177066;
35 [G] COG0036 Pentose-5-phosphate-3-epimerase 225 HGM_OVER 1-180 -3.940 HGC00683 gi|163310582|dbj|BABD01000118.1|4.0 TMP00861;
36 [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 472 HGM_OVER 1-148 -3.380 10  PB006791 A6TXD6_9CLOT/1-181 PB006791; Pfam-B_6791;
37 [P] COG0038 Chloride channel protein EriC 451 HGM_OVER 325-429 -3.550 11  PB032242 Q8FLW6_COREF/1-257 PB032242; Pfam-B_32242;
38 [C] COG0039 Malate/lactate dehydrogenases 317 HGM_OVER 2-144 -2.850 16  PB003645 Q65HI2_BACLD/1-230 PB003645; Pfam-B_3645;
39 [E] COG0040 ATP phosphoribosyltransferase 213 HGM_OVER 151-211 -2.490 PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]
40 [F] COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 162 HGM_OVER 13-160 -3.460 12  PB022815 A4DEQ0_LISMO/1-452 PB022815; Pfam-B_22815;


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Grynberg M, Topczewski J, Godzik A., Paszewski A. The Aspergillus nidulans cysA gene encodes a novel type of serine O-acetyltransferase which is homologous to homoserine O-acetyltransferases. Microbiology. 2000 Oct;146 ( Pt 10):2695-703.