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Query: gi|30260209|ref|NP_842586.1| deoxynucleoside kinase family protein (BA_0015) [Bacillus anthracis str. Ames], from B.anthracis

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTGVPFITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYEDIDEWSFQTEMFFLCNRYKQLEDINIKYLNQRKPVVADYHIFKNVIFASRTLKDSQYDKYMQIYRILTQDMPVPNVIVYLTASLETLQRRIAMRGREFEKNMDPNYLLQLTKDYETAMDAFKKDHPDIPVLKFNGDDMDFVKNPDDLNVILSALQNTLLKESKLast
1 -3.600PB005684 gi|160884252|ref|ZP_02065255.1| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]gi|156109991|gb|EDO11736.1| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]  ali follow..  111.....QCFVVAPSASGKGILIRLLVEPIHDEIRKE----------VTIQMKAYKKEKAEYDAMGKERTKKEAPQMPPNRMFLISGN--NTGTGILQNIMDSDGTGLICEAEADTLSTAIGS-DTLRKAFDHDRLSYNRRTDQEYREVKKSYLSVLISGTPSQVQTFIPTAEDGSYSRQLYYSQFMDNEIDWEEIFTAMGLEWKEKLSVIKT 320
2 -3.250PB022815 A4DEQ0_LISMO/1-452 PB022815; Pfam-B_22815;  ali follow..  10  356...............................................................................................................................YAFIVPKQASDLLTEGKALSHCVGSNYIKQHIEGKTTIIFVRDKQDLEKSLYTLEYKNGQIYQNCDPTKDVQMAANKWAKLLKS 445
3 -2.970HGC01024 gi|162869036|dbj|BABB01000971.1|4.0 TMP01399;  ali follow..  10  27................................................................................................................ENIIQPDRMENILYDYH-----LSISMGNNLSYSDNYQKEAYKNYVFEKHH-----------------ITEAEFDYTRHTEELASLYKKLGERFRSEKK 108
4 -2.820PB012771 _Gut.Meta.Jp.0094636_ gi|162817068|dbj|BABA01027641.1||1 (+ 249:636~0 complete)  ali follow..  29.........................................................................................................................PTCMLYLQEKHPHEYVRLIWADE-------AALLESVQRECEEREAVLVREMAEAEGVNEEMKGNEQMAWVQRMEMICGRVEEVVCE... 124
5 -2.490PB050904 Q64SA2_BACFR/1-230 PB050904; Pfam-B_50904;  ali follow..  10  77.........................................................................................................KQYNSYLKTASGYASSLKACTHLYNDGVRIFLTLGKLGKAIQNNQGIVASMNMNNLYIETATELVSVFTLLNDAVAKGSNENMLTGAERSK-TLWALNDQLSDFSR 182
6 -2.260PB012472 gi|62259485|gb|AAX77857.1| unknown protein [synthetic construct]  ali follow..  4................................................................................................................ENIIENLNIPTSRISKRIPKNSFETNTAEKKYLANDVKLITLEYSLVQQNIQVPAILDDEYNYSAINIISVQ----LNSVRNFKKIASVINKSI..... 97
7 -2.100PB062605 Q9F6T7_BACTN/1-105 PB062605; Pfam-B_62605;  ali follow..  16  50...........................................................................................................................LAAFAVLALYTFGRAAYDIGRNDGSRMETGHAGRVE.................................................... 85
8 -2.070HGC00816 gi|163609134|dbj|BABG01026932.1|1.0 TMP01075;  ali follow..  13  53...................................................................................................LSESSVGARIYALMTVLKGVAEIEMLCL-RESFEDNKRFLKSQMEQEENPVIRRLLEQDQTHLDRIQVQMATAREFLIMLRLKDEK------ESDIFPYLSRIEKSLKEQS. 158
9 -1.950HGC00787 gi|162657578|dbj|BAAX01002027.1|2.0 TMP01033;  ali follow..  15....TLLQIE------YYTEKEAFRKQTEQMGMQRKVKRGDAWFPLRIGKSFYNSLNQNAIEVFRTED--QDIEHNFEFGRPVMFFKAGETKTAQTDGKTEKKMLK--YFSFTGTVSYVDGDRMVITVPDSAPLLELQQADVPVGVQLSFDETSYKMMFDALDRTMKAKNNRLAYLRDLFYSHRKAERYSFEP.................. 193
10 -1.810PB046158 _JGI.0336690_ 2004028347 [Human Gut Community Subject 8]  ali follow..  13  73...............GKQTIKQLNAQGVQLSNIKITDEN---IKSFDRVARKYGIKYLVFFKAKDVDVMTAAFRE........................................................................................................................................ 142

FFAS is supported by the NIH grant R01-GM087218-01
1 2 8 9 7 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Database searching by flexible protein structure alignment. Protein Sci. 2004 Jul;13(7):1841-50.