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Query: gi|30260210|ref|NP_842587.1| isochorismatase family protein (BA_0016) [Bacillus anthracis str. Ames], from B.anthracis

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKNTALLIIDMINDFQFSHGPILAKKCEMITNPILQLKKTMKSFGYPIIYINDHYQLWRSDIDQLITHCTNEYSENIIHKIAPSSDDYIFIKPHYSAFYETPLNSLLGYLKIENLILTGVAGNICILFTANDAHMRNYTLYVPQDCIASNHDQDNLHALKIMETTLKANIVPSSQIKFNLast
1 -5.120PB013946 A7ABR4_9PORP/121-442 PB013946; Pfam-B_13946;  ali follow..  145LRMLKKLGQDLRNPKNICPEDFMAAH-DNATRKIEAIHEKERAAEQRRWEIERREREQQRQLQRKKDAEDFIANKSKFFGLVITDEEIIVKVLE----------------SIDEYYNEGKTQGICVFGYYKKADTLILSARIGDEIIETVEVDLRTLEVVQCHGKHNQDTEYHERII.. 306
2 -3.700PB001572 gi|163816107|ref|ZP_02207475.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]gi|158448527|gb|EDP25522.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]  ali follow..  13  141..........................................................................ASFHEKFIKGHVTLIGCPKLDSVDYSEKLTEIIRRNDIQSVTIVRMEVPCCLEMAAKKALQDSGKFIPWQVATISIDGR.......................... 221
3 -3.560PB010473 Q8A4J5_BACTN/121-234 PB010473; Pfam-B_10473;  ali follow..  21  28...........................................................................................KSQYLFIFAGGLVAVLLVVVI--LYIAGVNQWICIPFGLLSGSLLVWLTFRLNARYGEH............................. 84
4 -3.300HGC00870 gi|163286116|dbj|BABD01024572.1|2.0 TMP01154;  ali follow..  16..KETILLFHAPDK-----------------DTLLKIEMALFPLHVRLRRVAKEDYVQPLG-------VKDIPRIEETYEGDELSDTLFV----FAFFSDNRLNQALRKSGAGTFPYKAILTPTNQNWNALQCFSE........................................... 128
5 -3.270PB005346 A0R807_PELPD/1-258 PB005346; Pfam-B_5346;  ali follow..  1MTDSLFWAIDIKNQF----------MGMSQINQTTSGNFYSHRNITDQVLENFTDALDCLTAHLMLECSEVLAGVKPANLISIVNRTRPCGRNLYLLWQQHHTDLAQRLNNLNFMVLQSRQQSLLLDHVRLEHHLSHPGIRTLLHKAGYKDDADCEGMLLELRSRIGGNNSFPHEI... 173
6 -3.080HGC00991 gi|163600283|dbj|BABF01000984.1|3.0 TMP01348;  ali follow..  20................................................................................................................KMIAYCGLDCEKCDAYIATINDNQELRKKTAKL.................................. 52
7 -2.980HGC01215 gi|162843249|dbj|BABA01001460.1|3.0 TMP01713;  ali follow..  20  1....................................................................................................................LVGV---FCVEGFSVDVFIVHIREICF.................................... 24
8 -2.270HGC01056 gi|162659434|dbj|BAAX01000171.1|2.0 TMP01455;  ali follow..  13  1MKKLLLAMIAVAALISFAACDHNETYADQRDRELDSINAFLRNENIKVINEAEFEKRFEARKA---------------GDKAVKLTDTDPNNNEYVLFESNGIYMQVINDGCGDYIAKGKTQNVLCRFT.................................................. 114
9 -2.120PB007147 Q11UU2_CYTH3/1-245 PB007147; Pfam-B_7147;  ali follow..  8.PGKGIVLKEY-------------KNIQKIVDWILTIEDREQRTRYACVELMRQLNPGVRDTEEHTTFIMSNFKLDVDTPYPMPDIAVLGRKPERVPYNHNKLKYKHYGKNINLLI----------AILKEDGAEKEDAIIYLGRLMKRLYSTWNKENVDDEVIVEHLSELSKNNLQID 173
10 -1.930PB011051 Q8A0P0_BACTN/1-227 PB011051; Pfam-B_11051;  ali follow..  11  39..........................................................................QAVIARLIDIRKAQQEYRSLHHGMYTEHFDTLIDFVKNQKLPFV............................................................. 82

FFAS is supported by the NIH grant R01-GM087218-01
1 2 8 9 7 7   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Database searching by flexible protein structure alignment. Protein Sci. 2004 Jul;13(7):1841-50.