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Query: gi|11497094|ref|NP_051166.1| hypothetical protein (BB_P05) [Borrelia burgdorferi B31], from B.burgdorferi

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGDTTQLVKEYQEKRSKLEKFMKNPQHDASLLSNSNEFRDKNVEFFASGGTRTSKFDKLENHPFLGYPYKRGVKRVIQEAQDNQSHYEPHVEAGGGEDLYGICIDIDEFSKTATIVPITNNFEGYLVAKDSTVKVKDKLIFNKDGALEKVTGAPNKATINATALTDAKQISNEVYLVKVAVFGNKAMSRNLast
1 -5.760[S] COG4765 Uncharacterized protein conserved in bacteria  ali follow..  14  53...............................................................................DKITGRITTFDVYINETVQFGALQVTPDEAPRTDAFVTVDEIFTGWMFADSPGLNAVEHPIYD................................................ 132
2 -5.750[S] COG3978 Acetolactate synthase (isozyme II), small (regulatory) subunit  ali follow..  10  12.............................................................................................................................................FNPETLERVLRVVRHRGFHVCSMNMAAASDAQNINIELTVASPRSVDL. 59
3 -5.380[S] COG3692 Uncharacterized protein conserved in bacteria  ali follow..  2.........................................................AINFSPKVGEIL---CNFGNYPVSQNGPFSTTYYDGRIPPEMIKVVLNGKINGNAFIVVPLSTTRDHDKLKRGMHVEIASNVINDLQFFDQQIR....................................... 97
4 -5.200[M] COG1596 Periplasmic protein involved in polysaccharide export  ali follow..  14  35.................................................................NYKVATGDVLTISVYGDPGLTGLFPVSADGTIGYPLL-VNVVDQTVNEIGERISRDLASHVANRSVAVAVKEYAPIFVVGDVQKPGKRPGMIVLELFALGGGLREPNAQRDTSG........... 152
5 -5.160[C] COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit  ali follow..  17  36...........PENVIALLTFLRDDVQVNIIDICGVDWPQREKRFDVV-------------YHLLSPRQNLRVRIKLQVAEDEGVPSSTPVYMGAE-DMYGI---FEGHKDLRRIL-TDYGFEGHPLRKDFPVTGFVEVRYDDV.............................................. 161
6 -5.080[S] COG4084 Uncharacterized protein conserved in archaea  ali follow..  16  29.........................................................RIKKWILTSYAYRRDIRLAELLNVDEDHVIDVLSRARSCSGLYGLHSEVEQAERLLDNV----DDEVITLAVLMDVVSDGKLSEALEDELLRMFEGRKSVPIDRKELTKFFTSLRERGII............. 146
7 -5.060[C] KOG1713 NADH-ubiquinone oxidoreductase, NDUFS3/30 kDa subunit  ali follow..  10  90...........PDGVIPVLTFLRDHTNKSLVDLTAVDVPTRQNRFEIV-------------YNLLSLRFNSRIRVKTYTDELTPIESAVSVFKAAN-DMFGV---FANHPDLRRIL-TDYGFEGHPFRKDFPLSGYVELRYDDE.............................................. 215
8 -4.970[S] KOG0043 Uncharacterized conserved protein, contains DM10 domain  ali follow..  12  80.........AYDKKVLCFHAYFKQTLQEVY--HAPYLVRKVKIYYYLEDGTLEIYEPRVDNSGIVQGCVVHRQRVQKAPPCDNEFMSLIDLNVDQTVQIFDHITDCDPFTRT------------FLNKRGITVPDPVKSPCDPTEEQRKRENQPDRQILKFQAYWDDRTEFGDVRKLELCYY........ 259
9 -4.930[H] COG0212 5-formyltetrahydrofolate cyclo-ligase  ali follow..  1MTSLKDLKKQLRLQALGRRDALDEFWRVEVALEMAETARDHLAIEPGQISGFWPMRSEVDVRPLMFALREQGARLCLPAILDKTTIVFRELVRGAPDMGFGT--EAEVLDPEVMLVPLA-AFD----------ARGHRIGYGA-GYYDRAIAKLVDKGHTPRLIGIAFDCQ................... 165
10 -4.840[T] KOG3294 WW domain binding protein WBP-2, contains GRAM domain  ali follow..  1...............MSLNTSHTPDGQGILIYNGEMIL----LYTTNVKLKFEKYNVPAFKSTKSGALYLTSHRIIF-------------MNESKKDEFKSFAMPFNSVRDVKLEQPLPNYLKGWVQPMPGGNFDGCRLSFPKGGCIE.......................................... 121

FFAS is supported by the NIH grant R01-GM087218-01
1 3 5 0 8 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.