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Query: gi|11497068|ref|NP_051171.1| hypothetical protein (BB_P10) [Borrelia burgdorferi B31], from B.burgdorferi

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MIFTLDMVLNHLTQIFKGFKAYATENNFECDIINTYNHPYLSKITAASSNIIALKFDGTENLFDHNYRAGVFYENALEFSINFQIYIIAIVLNAKDFDANSRMLMLYSMLSDFLHNKAHKYNLPSLQPDYINKINFYIYPTSNMQTVGLINLGTKYSNHAYSASIAFNASVKAIEILKEEYEIAARYNLast
1 -6.8204df0_A mol:protein length:202 Orotidine 5`-phosphate decarboxylase  ali model follow..  14  7LVVALDTEVLKAIDVAKRLKGAVAGFKVGWDLIFEGGISIVGEIARYGNVIVDLKIADVPHVASRVVEK....................................................................................................................... 75
2 -6.3702jn9_A mol:protein length:105 YkvR protein  ali model follow..  15  38..........................................................................................................YHDIAVLLYEKTFNVEVPERDLAFRGEMTNYSTSLTNLYEPGAVS..................................... 82
3 -6.0702hnk_A mol:protein length:239 SAM-dependent O-methyltransferase  ali model follow..  11  42..MQISPEEGQFLNILTKISG--AKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADKENYP----------NYYPLILKLLKPGGLLIADNVLWDGSVADLSHQEPSTVGIRKFNELVYNDSLVD 215
4 -5.7205n5d_A mol:protein length:226 Methyltransferase  ali model follow..  43..LAVSAPQGKLLHLLARLRQ--ARRILEIGTFGGYSSIWLARALPPDGRLVTIEWERSFAESAASRLAEAGVAHLVEQHVGRAL----------------------DILPTLDRPGTAPFDMVFVDANKPDIPEYFTWALKLSRPGAVVVVDNVVLGGAVTDPDHPDAGVQGVRRFHEMLAGRSDVT 204
5 -5.7102key_A mol:protein length:112 Putative phage integrase  ali model follow..  10  31......RHHKSCMRKFKEYCEGLQFHELTEDFLRDYLI-YMKKTLCNADSTAQRNLSTIKIYVSAAIKKGYMEND................................................................................................................. 98
6 -5.6902a4v_A mol:protein length:159 Peroxiredoxin DOT5  ali model follow..  13  15............................DLSLLNEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYAAVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLGAKKTPLSGSIRSHFIF-------VDGKLKFKRVKISPEVSVNDAKKEVLEVAEKFKEE........ 159
7 -5.6404r3v_A mol:protein length:183 Karilysin  ali model follow..  10  48.............AIRSAFALWSDKSTLSFIQVYNPNQADIKIKWEKGNHGDGYPFDGNTGILAH-----AFYPPPAGGNYAGHLHF-------DGDENWSINGSGIDLITVAAHAIGHLLGIEHSNVSSALMYPYYTGIKRQLDNDDCLAVWDLYG............................... 179
8 -5.5402mtd_A mol:protein length:164 Decorin binding protein A  ali model follow..  13  55................................................................................................LKAKIKAIQVAERFVKAIKEEAEKLKKSGSSGAFSAMYDLMIDVSKPLEEIGIQKMTGTVKEAAIAIAQAMEDKLNALKNLKEKAKTAT... 162
9 -5.4903b9n_A mol:protein length:440 Alkane monooxygenase  ali model follow..  14  86............LMLISAMAYVTKHLAFAVTFSTTYEHPYLDHLTKGRINVVTSHLPGIKKILEHDER----YDLADEYEVCYKLWEGSWEDNAVIRDIENNIYTDPSKVHEINHSGKY-FEVPGPHLCEPSPQRTPVIYQAGMSERG-REFAAKHAECVFLGGKDVETLKFFVDDIRKRAKKYGR.. 270
10 -5.4103dul_A mol:protein length:223 O-methyltransferase, putative  ali model follow..  40..HDVSPTQGKFLQLLVQIQG--ARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLAL----------------------DSLQQIENEKYEPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDNVVREGEVIDNTSNDPRVQGIRRFYELIAAEPRVS 201

FFAS is supported by the NIH grant R01-GM087218-01
1 3 1 9 1 3   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.