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Query: gi|60681605|ref|YP_211749.1| hypothetical protein (BF2124) [Bacteroides fragilis NCTC 9343] (Range: 1-361), from B.fragilis

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKPEKTAPVLAITPNEQIFLPKCYHRIQDICAVIYDQLTEIYKEKNYQDLYHTESILDGSETGMDELNKNKIHAIDWLTWNNKNKDLELILTKHIILSITSDFINFVFESLYCAKRGKITVAYALIRKPFTDELLILEQLLYNRSDFIYRFFHSDTVETYDPSSKNINKVDVIKNAVDCLTNPLFDADFVHDLRYNKLCEYGINGISNHALHIVTKNKNYRTEPQNFNFVFSQEEDFALYYKQYYWVVPYILIYAVDIIDKLIFSILKDTDNQNLSIVKRLRRTIGFSLFTESYLRTKKDSIFILFNKKIRFTCPICKNKYFLKRDDYEFFFETEAILCPKCNNDNLTIENIQKIKNIIGLLast
1 -6.830IDP06453 gene: F4L; F4L [Monkeypox virus Zaire-96-I-16] NP_536480 [Monkeypox virus Zaire-96-I-16]  ali follow..  12  2..........................................................................................................................................................ENVYISSYSSNEQISMAVVTTDIRELLSQYVDDANLENLIEEKSSKYYIKNIGNTKSNI---------EETKFESKNNIGIEYSKDSRNKLSYR---NLEYKTLCDMIKGTSGTEKEFLRYLLFGIKCIKKGVEYNIDKIKDVSYNDYFNVLDEKYNTPCPNCKSRMMIQTRAADE--PLVRHACRDCKQHFKPPKFRAF....... 202
2 -6.640IDP92084 DNA-directed RNA polymerase III subunit, putative [Toxoplasma gondii ME49] TGME49_112250 [Toxoplasma gondii ME49]  ali follow..  18  1.....................................................................................................................................................................................................................................................................................................................MALFCPTCHNMLLVRQEV------TMQFHCRTCPYVFNIKEKLTRKMPL... 43
3 -6.140IDP91322 hypothetical protein VV2_0302 [Vibrio vulnificus CMCP6] VV2_0302 [Vibrio vulnificus CMCP6]  ali follow..  26  9.......................................................................................................................................................................................................................................................................................................................LPCSKCKTPKKIIQGQGKR-----RARC-KCGPDCRTGEDIQA....... 49
4 -6.030IDP93836 cytochrome c-type protein NrfB [Yersinia enterocolitica subsp. palearctica Y11] YP_006003980 [Yersinia enterocolitica subsp. palearctica Y11]  ali follow..  10  144......................................................................................................................................................................................................................................................................................................................KLSCVSCHQLHPKTDPMHGLDDKGRVRICVDCHRRQQ.............. 180
5 -5.900IDP95002 Set165a_005 [Vibrio cholerae O1 biovar El Tor]  ali follow..  10  107..............................................................................................................................................................................................................................................................................................................YKGAFTYLRLHNLQNDNTWETTTITS---FLHIGTGCPLEARLKQKQQAV......... 153
6 -5.640IDP92763 hypothetical protein [Vibrio cholerae O1 biovar El Tor] AGG36631 [Vibrio cholerae O1 biovar El Tor]  ali follow..  12  32..............................................................................................................................................................................................................................................................................................................TSGHNAVFTLECSICGVDEVLFPDGFTSTKSNLVCNPCSCSGRYKYSQYHILVQRNCA. 94
7 -5.250IDP00453 putative iron-sulphur protein YPO2969 [Yersinia pestis CO92]  ali follow..  10  4.....................................................................................................................................................................................NKSVARDERYYKAYLESRTISRRGLFRGLLKGVQPSTTTAPSDITAPPPLRPPYAIDEP-GVCVAACEENLIVMVNQRPALNFSTPYFSTPY--SRCQACSTACQTGALSSAEFHIAARPSVKNICQNTYIYCDSCADALIWQANQPPTLVTELCDGCGECVFRCPARILEMQI...... 189
8 -4.920IDP02628 putative cytoplasmic protein [Salmonella typhimurium LT2] STM2923 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  15  1.......................................................................................................................................................................................................................................................................................................................MICPRCADAHIELMATSPVKGVWTVYQCQHCLYTWRDTE........... 39
9 -4.900IDP90190 gene: CrmC; CrmC or CPXV191 protein AAM13631.1 [Cowpox virus (Brighton Red)]  ali follow..  14  58...........................................................................................................................................................................................................................................................................................................EFAKIRCSGSDNTKCERCPPHTYTTVPNY----SNGCHQCRKCPTGSFDKVKCTGTQNSK.. 113
10 -4.770IDP92756 hypothetical protein [Vibrio cholerae O1 biovar El Tor] AGG09396 [Vibrio cholerae O1 biovar El Tor]  ali follow..  12  32..............................................................................................................................................................................................................................................................................................................TSGRNAVFTVECSICSVDEVLFPDGFTSTKSNLVCNPCPCSGRYKYSQYHILVQRNC.. 93

FFAS is supported by the NIH grant R01-GM087218-01
1 2 6 4 6 7   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Rodrigues AP, Grant BJ, Godzik A, Friedberg I. The 2006 automated function prediction meeting. BMC Bioinformatics. 2007 May 22;8 Suppl 4:S1-4.