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Query: gi|60682225|ref|YP_212369.1| putative two component system response regulator (BF2753) [Bacteroides fragilis NCTC 9343] (Range: 1-225), from B.fragilis

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKILIIEDEPSLRELIQRSLEKERYVVEAAADFQSGLRKIEDYDYDCVLLDIMLPDGNGLNLLEQLKKMRKRENVIIISAKDSLDDKVLGLELGADDYLPKPFHLAELNARIKSVIRRQRRDGEMDIRLANIRIVPDTFQVFVDDKEIELNRKEYDILLYFANRPGRLVNKNTLAESVWGDHIDQVDNFDFIYAQIKNLRKKLKDAGALAELKAVYGFGYKMTVELast
1 -29.400sp|O95263|PDE8B_HUMAN High affinity cAMP-specific and IBMX-insensitive 3`,5`-cyclic phosphodiesterase 8B OS=Homo sapiens GN=PDE8B PE=1 SV=2 (Range: 1-300)  ali follow..  10  135..LLIFAKEDSQSDGFWWACDRAGYRCNIARTPESALECFLDKHHEIIVIDHRQTQFDAEAVCRSIRATNEHTVILAVVSRVSDDHELPLLHAGFNRRFMENSSIIACYNELIQIEHGEVRSQFKLRACNSVFT-----ALDHCHEAIEITSDDHVIQYV-----NPAFER...................................................... 300
2 -21.500sp|O60658|PDE8A_HUMAN High affinity cAMP-specific and IBMX-insensitive 3`,5`-cyclic phosphodiesterase 8A OS=Homo sapiens GN=PDE8A PE=1 SV=2 (Range: 1-300)  ali follow..  10  83..LLVFTKEDNQCNGFCRACEKAGFKCTVTKEAQAVLACFLDKHHDIIIIDHRNPRLDAEALCRSIRSSKSENTVIVGVVRRVDREELSVMPFISAGFTRRYVENPNIMACYNELLQLEFGEVRSQLKLR--ACNSVFTALENSEDAIEITSEDRFIQYA---NPAFETTMGYQSGELIGKELGEVPINEKKADLLDTINSCIRIGKE................. 285
3 -12.900sp|O95263|PDE8B_HUMAN High affinity cAMP-specific and IBMX-insensitive 3`,5`-cyclic phosphodiesterase 8B OS=Homo sapiens GN=PDE8B PE=1 SV=2 (Range: 151-450)  ali follow..  12  1..................ACDRAGYRCNIARTPESALECFLDKHHEIIVIDHQTQNFDAEAVCRSIRATNPSEHTVILAVVSRVSDDLPLLHAGFNRRFMENSSYNELIQIEHGEVRSQFKLRACNSVFTALDHCHEAIEITSDDHVIQYVNPAFERMELLGKELADLPKSDKNRADLLDTINTCIKKGKEWQGVYYARRKSGDSIQQHVKITPVIGQGGKIR.. 222
4 -8.370sp|P22033|MUTA_HUMAN Methylmalonyl-CoA mutase, mitochondrial OS=Homo sapiens GN=MUT PE=1 SV=4 (Range: 451-750)  ali follow..  10  166.RLLVADGHDRGAKVIATGFADLGFDVDIGQTPREVAQQAVDADVHAVGISTLAAGHKTLELIKELNSLGRPDILVMCGGVIPPQDYEFLFEVGVSNVFGPGTRIPKAAVQVLDDIEKCLEKKQQSV.................................................................................................. 300
5 -7.760sp|Q9NX45|SOLH2_HUMAN Spermatogenesis- and oogenesis-specific basic helix-loop-helix-containing protein 2 OS=Homo sapiens GN=SOHLH2 PE=2 SV=2  ali follow..  15  19IDILLVGDVTVLADTVQKLFANIAEVTITISDTKEAAALLDDCIFNMVLLKVSSLSAEELEAIKLIRFGKKKNTHSLFVFIIPENFKGCISGHGMDIALTEPLTMEKMSNVVKY--TDLFACSESLRNGNGLELNASLSEFEKNKKISLLSSKE--------LRRERIKYCCEQLRTL-GRKNDAASVLEATVDYVKYIREKIS..................... 257
6 -7.210sp|O95948|ONEC2_HUMAN One cut domain family member 2 OS=Homo sapiens GN=ONECUT2 PE=2 SV=2  ali follow..  13  329....................................................QLEEINTKEVAQRITAELKRYSI----PQAIFAQRVLCRSQGTSDLLRNP-SGRETFRRMWKWLQEPEFQRMSALRLAACKRKEQEPNKDRNNSQLVFTDLQRRTLFAIFKENKR--MQITISQQL---------ELTTVSNFFMNARRRSLE.................... 483
7 -7.190sp|Q9UBC0|HNF6_HUMAN Hepatocyte nuclear factor 6 OS=Homo sapiens GN=ONECUT1 PE=2 SV=1  ali follow..  13  288....................................................QMEEINTKEVAQRITTELKRYSI----PQAIFAQRVLCRSQGTSDLLRNP-SGRETFRRMWKWLQEPEFQRMSALRLAACKRKEQEHG-TPKKPRLVFTDVQRRTLHAIFKENKRPSKEITISQQL---------ELSTVSNFFMNARRRSLD.................... 442
8 -7.120sp|O43598|RCL_HUMAN Deoxyribonucleoside 5`-monophosphate N-glycosidase OS=Homo sapiens GN=RCL PE=1 SV=1  ali follow..  12  21PALYFCREDRTLYERIVSRLRRFGTVLTEHVAAAELGARGEEQQADVVVAEVTQPSLGGYEL-----AVAFNKRILCL-FRPQSGRVLSAMIRGAADFQVWDYEEGEVEALLDRYFEADPPGQVA.................................................................................................... 167
9 -7.110sp|Q5JSJ4|DX26B_HUMAN Protein DDX26B OS=Homo sapiens GN=DDX26B PE=2 SV=1 (Range: 151-450)  ali follow..  11  139.....................................................IPESFWPDQNLPSLPPRTSHPVVRFSCVDCEPMVIDKLPF--DKYELEPSPLTQYILERKVFVTSSGKYNELGYPFGYLKASTTLTCVN-----LFVMPYNYPVLLPLLDDLFKVHKLKPNLK--WRQAFDSY--KTLPPYYLLTKLESERILASVGKK............. 294
10 -7.040sp|Q9UL03|INT6_HUMAN Integrator complex subunit 6 OS=Homo sapiens GN=INTS6 PE=1 SV=1 (Range: 151-450)  ali follow..  14  135.....................................................VPESFWPDQNSPTLPPRTSHPVVKFSCTDCEPMVIDKLPF--DKYELEPSPLTQFILERKVYVSNSAKYSELGHPFGYLKASTALNCVN-----LFVMPYNYPVLLPLLDDLFKVHKAKPTLK--WRQSFESY--KTMPPYYLGPLKKAVRMMGAPNLISMEYGLSY..... 300

FFAS is supported by the NIH grant R01-GM087218-01
1 2 6 5 0 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.